| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985938
Identifier: 94985938
GI number: 94985938
Start: 1950012
End: 1950575
Strand: Reverse
Name: 94985938
Synonym: Dgeo_1838
Alternate gene names: NA
Gene position: 1950575-1950012 (Counterclockwise)
Preceding gene: 94985939
Following gene: 94985936
Centisome position: 79.06
GC content: 68.26
Gene sequence:
>564_bases ATGACCCCAACCCTCGTGATTGTGCCTGGCCTGGGAGACAGCGGGCCGGAGCATTGGCAAACTCTCTGGGAACAGAAGTT CGGTGCGGTCCGCGTGCGGCAAGACCAACCCGATCAGCCGGAGCCCACCGCCTGGGCTGCCCGGCTCGATGAGGTGGTAC GCAACACCCCCGGTGCACTGGTGCTGGTGGCGCACAGCCTGGGTGTATCGACCGTCGCCGCCTGGGCAGCCCGCTTCGCG GTGCCGGAGCGCGTACGCGCTGCCCTGCTGGTGGCGCCACCCGATCCAGAACGCCCGGACGCGCTGGAGGAGGTACGCCG CTTCGCTCCGCTCCCCTCTGGACCACTTCCTTTTCCGGCCTTGGTTGTGGCGAGTGAGAACGACCCCTACGCGGCGTTTG AGTGGGCGGAGGCGCTGGCGGCTAGTTGGGACGCAGCTTTTGTGACGGCGGGGGCGGCAGGACATCTCAACACCGCCAGC GGACACGGAGAGTGGCCGGAAGGCGAGGTGCTGCTCTCGGAGCTGCTGCACGCCTGGACCCCGCCCCACATCACCCGCTT GTAA
Upstream 100 bases:
>100_bases CGAACTTGTCTGAAGTCAGACCTTCTGAAGCCAGCCGTGTTCAGAGCCCCGCTTTGGCGGGGTTTTCTTTGCTGACTGCT AGAGTTTGCTAGGCTCGGTC
Downstream 100 bases:
>100_bases ACGCTTGTAAAACGCGAAGGGCCGCGCCAACGCTGGACGCGGCCCACTTTTTGCCGGAGTTCAGTGGGTGGCGGCGGGCG CGACGTACTTGTCGAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTPTLVIVPGLGDSGPEHWQTLWEQKFGAVRVRQDQPDQPEPTAWAARLDEVVRNTPGALVLVAHSLGVSTVAAWAARFA VPERVRAALLVAPPDPERPDALEEVRRFAPLPSGPLPFPALVVASENDPYAAFEWAEALAASWDAAFVTAGAAGHLNTAS GHGEWPEGEVLLSELLHAWTPPHITRL
Sequences:
>Translated_187_residues MTPTLVIVPGLGDSGPEHWQTLWEQKFGAVRVRQDQPDQPEPTAWAARLDEVVRNTPGALVLVAHSLGVSTVAAWAARFA VPERVRAALLVAPPDPERPDALEEVRRFAPLPSGPLPFPALVVASENDPYAAFEWAEALAASWDAAFVTAGAAGHLNTAS GHGEWPEGEVLLSELLHAWTPPHITRL >Mature_186_residues TPTLVIVPGLGDSGPEHWQTLWEQKFGAVRVRQDQPDQPEPTAWAARLDEVVRNTPGALVLVAHSLGVSTVAAWAARFAV PERVRAALLVAPPDPERPDALEEVRRFAPLPSGPLPFPALVVASENDPYAAFEWAEALAASWDAAFVTAGAAGHLNTASG HGEWPEGEVLLSELLHAWTPPHITRL
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20104; Mature: 19973
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLVIVPGLGDSGPEHWQTLWEQKFGAVRVRQDQPDQPEPTAWAARLDEVVRNTPGAL CCCCEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE VLVAHSLGVSTVAAWAARFAVPERVRAALLVAPPDPERPDALEEVRRFAPLPSGPLPFPA EEEEHHCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCE LVVASENDPYAAFEWAEALAASWDAAFVTAGAAGHLNTASGHGEWPEGEVLLSELLHAWT EEEECCCCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PPHITRL CCCCCCC >Mature Secondary Structure TPTLVIVPGLGDSGPEHWQTLWEQKFGAVRVRQDQPDQPEPTAWAARLDEVVRNTPGAL CCCEEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE VLVAHSLGVSTVAAWAARFAVPERVRAALLVAPPDPERPDALEEVRRFAPLPSGPLPFPA EEEEHHCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCE LVVASENDPYAAFEWAEALAASWDAAFVTAGAAGHLNTASGHGEWPEGEVLLSELLHAWT EEEECCCCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC PPHITRL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA