| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94985935
Identifier: 94985935
GI number: 94985935
Start: 1948529
End: 1949113
Strand: Reverse
Name: 94985935
Synonym: Dgeo_1835
Alternate gene names: NA
Gene position: 1949113-1948529 (Counterclockwise)
Preceding gene: 94985936
Following gene: 94985934
Centisome position: 79.0
GC content: 60.85
Gene sequence:
>585_bases ATGACAGAACGCATCGCACTCTTTATTGATGGCGCCAACGTGTATGCCGCGGCCAAGCGGCTGGGCTGGAATTTCGACCA CCGTAAGATGCTGGAATTTTTCCGAAGCTATGGCAGTCTGCACAATGCCTTCTACTACACAGCCGTCCCTCTCCCGATGG ATGACAAGCAGAAGCGCTTTATTGACGCGCTGACCTACATGGGCTACACCGTGCGCACGCGGCCTCTGCGCGAGAGCACC GATGAGCACGGCGACACGCATCGACGTGCCAGCCTCGATATCGAGATTGTGACCGATCTGCTCACCACCTCCGATCGCTT CGACACCGCGGTGCTGCTGACAGGCGACGGCGACTTCGAGCGTCCGGTGGAGGTGTTGCGGGCGCGTGGCAAGCGTGTGG TGGTAGCGAGCATTCCCGAAATGACCAGCTACGAGCTGCGCAATGCCGCCGATGAATATGTGGACCTGGGTGCCATCCGT GAACAGGTGGAGCGCCTCGGCTATCGCCTTCCCAGCGAGCAGCGCGTCACCGAGAACCGCCCGTACTACGTGACCGCTCC CCTCACGGATGCCGATGAGCGCTGA
Upstream 100 bases:
>100_bases GAATCAAGAGGACATGGATTGAGACGGGCTGCCCGGCCCCCGTATTCTGGAAGCGTCTGCTCGTTGGTCACAGGCCCGCG TGCAGGAAAGGTCTCAAACC
Downstream 100 bases:
>100_bases GACGACCTCACTGCCCGCCGCGCTGCCCATCGCCCTGGACGCTGCCGGGGGAGACCATGGCGTGACACCGAATGTCGAGG GGGCGGTGCAGGCCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRFIDALTYMGYTVRTRPLREST DEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGDFERPVEVLRARGKRVVVASIPEMTSYELRNAADEYVDLGAIR EQVERLGYRLPSEQRVTENRPYYVTAPLTDADER
Sequences:
>Translated_194_residues MTERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRFIDALTYMGYTVRTRPLREST DEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGDFERPVEVLRARGKRVVVASIPEMTSYELRNAADEYVDLGAIR EQVERLGYRLPSEQRVTENRPYYVTAPLTDADER >Mature_193_residues TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRFIDALTYMGYTVRTRPLRESTD EHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGDFERPVEVLRARGKRVVVASIPEMTSYELRNAADEYVDLGAIRE QVERLGYRLPSEQRVTENRPYYVTAPLTDADER
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22393; Mature: 22262
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRF CCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH IDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGDFE HHHHHHCCCEEECCCCHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCH RPVEVLRARGKRVVVASIPEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQRVTENR HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYYVTAPLTDADER CEEEECCCCCCCCC >Mature Secondary Structure TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRF CCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH IDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGDFE HHHHHHCCCEEECCCCHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCH RPVEVLRARGKRVVVASIPEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQRVTENR HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PYYVTAPLTDADER CEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA