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The map label for this gene is sdaAB [H]

Identifier: 94985433

GI number: 94985433

Start: 1415416

End: 1416081

Strand: Reverse

Name: sdaAB [H]

Synonym: Dgeo_1332

Alternate gene names: 94985433

Gene position: 1416081-1415416 (Counterclockwise)

Preceding gene: 94985434

Following gene: 94985432

Centisome position: 57.4

GC content: 68.17

Gene sequence:

>666_bases
ATGTCCCTGCTCGACATGATCGGTCCGGTGATGATCGGCCCGAGCAGCAGCCACACGGCGGGTGCCTGCCGGCTGGGTCT
GGTCGCCCACCATCTGCTCGGGGAGGCGCCGCGCCGCGCGCTGATTGGCCTGCACGCTTCCTTTGCCAAGACCGGGCGGG
GTCACGGCACCCACCTCGCGCTGGTGGCGGGCCTGCTCGGCTTTGCCCCCGACGACCCCCGTTTGCCCCGCGCCTTCGAG
GAGGCTCAGGCGGCGGACCTCAGGGTCGAGTTCAAGGACATGGACCTAGGGGATGTCCATCCCAACACCGCGCTCATTGA
GTTGCATGGGGACACCCAGCAGGTGACGGTGCAGGGCAGTTCCACCGGCGGCGGCGTGATCCAGGTCACGCAGGTGCAGG
GCCTGGGCGTGAACTTCAGCGGTGCCAGTCCCACCGTCCTGCTCCGTTACACCGATGCGGTGGGCATGATCGCCCGCATC
GCCACCACCATTGCCGCCGACGGCGTGAACATCGCCGCGCTGACCTGCACCCGTGAGACCCGCGGTGGCCAGGCCCTCCT
CGCCATCGAACTCGACGCGCCGCTCAGCGCGGAAGCCCTCGCCTTTTTGAACCGCTGGCCCGATACCAATTGGGTGCGCC
TGCTGCCCAAACTGATGGAAGGCTAA

Upstream 100 bases:

>100_bases
CCTGCGAGGGGTGGTCTTCTGGGTTTAAGGACGGTGTGGTGGCGGTTTTCCTGTCCGCCCGCCCCGGACACGCTGCTCCG
GACTTGCCTATACTGATTTT

Downstream 100 bases:

>100_bases
GCCGCGCTCCAGGAGCCCTTGATGACGCTCGAAGAACTGATGAATGCTCCTGCGCCCGCCTCGAGCTGGGTGCTGGCGCA
GGATTGCCAGGAAACCGGCC

Product: L-serine dehydratase, iron-sulfur-dependent, beta subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSLLDMIGPVMIGPSSSHTAGACRLGLVAHHLLGEAPRRALIGLHASFAKTGRGHGTHLALVAGLLGFAPDDPRLPRAFE
EAQAADLRVEFKDMDLGDVHPNTALIELHGDTQQVTVQGSSTGGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARI
ATTIAADGVNIAALTCTRETRGGQALLAIELDAPLSAEALAFLNRWPDTNWVRLLPKLMEG

Sequences:

>Translated_221_residues
MSLLDMIGPVMIGPSSSHTAGACRLGLVAHHLLGEAPRRALIGLHASFAKTGRGHGTHLALVAGLLGFAPDDPRLPRAFE
EAQAADLRVEFKDMDLGDVHPNTALIELHGDTQQVTVQGSSTGGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARI
ATTIAADGVNIAALTCTRETRGGQALLAIELDAPLSAEALAFLNRWPDTNWVRLLPKLMEG
>Mature_220_residues
SLLDMIGPVMIGPSSSHTAGACRLGLVAHHLLGEAPRRALIGLHASFAKTGRGHGTHLALVAGLLGFAPDDPRLPRAFEE
AQAADLRVEFKDMDLGDVHPNTALIELHGDTQQVTVQGSSTGGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARIA
TTIAADGVNIAALTCTRETRGGQALLAIELDAPLSAEALAFLNRWPDTNWVRLLPKLMEG

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23139; Mature: 23008

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDMIGPVMIGPSSSHTAGACRLGLVAHHLLGEAPRRALIGLHASFAKTGRGHGTHLA
CCHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEHHHHHHHCCCCCCCHHH
LVAGLLGFAPDDPRLPRAFEEAQAADLRVEFKDMDLGDVHPNTALIELHGDTQQVTVQGS
HHHHHHHCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEC
STGGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARIATTIAADGVNIAALTCTRET
CCCCCEEEEEEEEECCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCC
RGGQALLAIELDAPLSAEALAFLNRWPDTNWVRLLPKLMEG
CCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLLDMIGPVMIGPSSSHTAGACRLGLVAHHLLGEAPRRALIGLHASFAKTGRGHGTHLA
CHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEHHHHHHHCCCCCCCHHH
LVAGLLGFAPDDPRLPRAFEEAQAADLRVEFKDMDLGDVHPNTALIELHGDTQQVTVQGS
HHHHHHHCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEEEC
STGGGVIQVTQVQGLGVNFSGASPTVLLRYTDAVGMIARIATTIAADGVNIAALTCTRET
CCCCCEEEEEEEEECCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCC
RGGQALLAIELDAPLSAEALAFLNRWPDTNWVRLLPKLMEG
CCCEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]