| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is pncB [H]
Identifier: 94985426
GI number: 94985426
Start: 1408540
End: 1410000
Strand: Reverse
Name: pncB [H]
Synonym: Dgeo_1325
Alternate gene names: 94985426
Gene position: 1410000-1408540 (Counterclockwise)
Preceding gene: 94985427
Following gene: 94985425
Centisome position: 57.15
GC content: 69.95
Gene sequence:
>1461_bases ATGACCGGACCTTCCTCGCCCCCCACCTCCTCGGCCCTCTTCACCGATCTCTATCAGCTCACGATGATGCAGGGCTACTA CGCCCACGGTCTACACACCGAGGAGGCGGTCTTTGATCTGTACTTCCGCAAGCAGCCCTTCGGCGGCGGCTTCGCGGTGT GGGCGGGGCTAGAACCGGCGCTGGAGCTGCTCGAAACCCTGCGCTTCAGCGAAACGGACCTCGCCTACCTGGACTCGCTG GGCCTCTTTCAGCCCGAGTTCCTTACGGCGCTGCGCGGCTGGAAGTTCAGCGGGCGCGTCACGGCCTTCCGCGAGGGCAG CGTGGTGTTCGCGCACGAGCCGCTGCTGACTGTCACCGCGCCGCTGTGGGAGGCGCAGCTTGTCGAGACGGCGCTGCTCA ACACCCTGAACTTCCAGACCCTGGTGGCGACCAAGGCGGCCCGCTGCGTCCTGGCGGCAGAGGCCAGTCCCTACGGCGGG CAGATCATCGAGTTTGGTGCGCGGCGAGCGCAGGGGCCGGACGGGGCACTCAGCGCCGCGCGTGCCGCCTTTGTGGGGGG AGCAGTCGGCACCAGCAACGTGGAGGCGGGGCGTATCTTCGGCCTGCCACTGACCGGCACGCACGCCCACGCCTGGGTGG AGAGCTTTCCCGACGAATTGACGGCCTTCCGCGCCTATGCCGCCCTGTACCCCGACAACACCACCCTGCTGCTCGATACG GTGGACACGCTGCGCAGCGGTTTGCCCAATGCGCTCATTGTGGCGCGGGAACTGCGCGCGGCGGGGCATGAGCTGCGCGG TGTGCGGCTTGACAGCGGTGACCTCGCGTACCTGTCGAGCCGGATTCGTGCGGCGCTCGACGCGGCGGGCTTCCCGGACG TGAAGATTGTCGCCAGCAATGACCTGTCCGAATCGGTGATCGCTTCGGTCATCGCAGAGGGCGGGCGGGTGGACGTGTAC GGCGTCGGCACCCAGCTGGCCACGGCGGGCGGGGAGGGCGGCGGCGCGCTGGGGGGCGTCTTTAAACTCGCGCAGCTCGG CGGCGTGCCCAAGATGAAGCTGACGGGCGACCCCGCCAAATCCAGCCTGCCCGGGGTGAAGTATGTGTGGCGGGGCGTGG GCGAGGACGGACAGTACGCCCTCGACGTGCTGACGCTGGGCGAGGTGCCCTGCCCAGGCCAGCGCGTCAGCGACCCTACC AACCCGCTGCGCTTCGCGCGGCTGCCCGACGGCCTCGCCTGGCGGGATGCCCGCGAGGTGGTGCTCGAGGGCGGGCGGCG CACCGGTCCGCCCGAGACGCTGGGGCAGGCCCAGGCCCGCGCCCGCGCTGACCTCGCCCGGCTCCCAGCGGGTACGCGCC GTCCCCTCAATCCCCATATCTACCGCGTCAGCCTGGGAGATGACGTGGCCGGATTGCGCGACCGTGTGGCAGAGGAGCTG CGTGCGCACGTGGGGAGATGA
Upstream 100 bases:
>100_bases TTGCCGCCTGCTTTGCGCTGGCTGCCCTATGCGGCTGGGCCATCGGGATCGAGACACGTGGGCGCAAGCTGCCGGAGACG CTGCTGCCGGAGAATGGGGC
Downstream 100 bases:
>100_bases GCGCGCCGCCTGCACCCGCCGCTGTCTTCGTGGGCCGCTTTCAGCCGCCACACGCGGCGCACGTGGCGACGGTGCAGCAC GCGCTGGTCCACGCCTCCCG
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTGPSSPPTSSALFTDLYQLTMMQGYYAHGLHTEEAVFDLYFRKQPFGGGFAVWAGLEPALELLETLRFSETDLAYLDSL GLFQPEFLTALRGWKFSGRVTAFREGSVVFAHEPLLTVTAPLWEAQLVETALLNTLNFQTLVATKAARCVLAAEASPYGG QIIEFGARRAQGPDGALSAARAAFVGGAVGTSNVEAGRIFGLPLTGTHAHAWVESFPDELTAFRAYAALYPDNTTLLLDT VDTLRSGLPNALIVARELRAAGHELRGVRLDSGDLAYLSSRIRAALDAAGFPDVKIVASNDLSESVIASVIAEGGRVDVY GVGTQLATAGGEGGGALGGVFKLAQLGGVPKMKLTGDPAKSSLPGVKYVWRGVGEDGQYALDVLTLGEVPCPGQRVSDPT NPLRFARLPDGLAWRDAREVVLEGGRRTGPPETLGQAQARARADLARLPAGTRRPLNPHIYRVSLGDDVAGLRDRVAEEL RAHVGR
Sequences:
>Translated_486_residues MTGPSSPPTSSALFTDLYQLTMMQGYYAHGLHTEEAVFDLYFRKQPFGGGFAVWAGLEPALELLETLRFSETDLAYLDSL GLFQPEFLTALRGWKFSGRVTAFREGSVVFAHEPLLTVTAPLWEAQLVETALLNTLNFQTLVATKAARCVLAAEASPYGG QIIEFGARRAQGPDGALSAARAAFVGGAVGTSNVEAGRIFGLPLTGTHAHAWVESFPDELTAFRAYAALYPDNTTLLLDT VDTLRSGLPNALIVARELRAAGHELRGVRLDSGDLAYLSSRIRAALDAAGFPDVKIVASNDLSESVIASVIAEGGRVDVY GVGTQLATAGGEGGGALGGVFKLAQLGGVPKMKLTGDPAKSSLPGVKYVWRGVGEDGQYALDVLTLGEVPCPGQRVSDPT NPLRFARLPDGLAWRDAREVVLEGGRRTGPPETLGQAQARARADLARLPAGTRRPLNPHIYRVSLGDDVAGLRDRVAEEL RAHVGR >Mature_485_residues TGPSSPPTSSALFTDLYQLTMMQGYYAHGLHTEEAVFDLYFRKQPFGGGFAVWAGLEPALELLETLRFSETDLAYLDSLG LFQPEFLTALRGWKFSGRVTAFREGSVVFAHEPLLTVTAPLWEAQLVETALLNTLNFQTLVATKAARCVLAAEASPYGGQ IIEFGARRAQGPDGALSAARAAFVGGAVGTSNVEAGRIFGLPLTGTHAHAWVESFPDELTAFRAYAALYPDNTTLLLDTV DTLRSGLPNALIVARELRAAGHELRGVRLDSGDLAYLSSRIRAALDAAGFPDVKIVASNDLSESVIASVIAEGGRVDVYG VGTQLATAGGEGGGALGGVFKLAQLGGVPKMKLTGDPAKSSLPGVKYVWRGVGEDGQYALDVLTLGEVPCPGQRVSDPTN PLRFARLPDGLAWRDAREVVLEGGRRTGPPETLGQAQARARADLARLPAGTRRPLNPHIYRVSLGDDVAGLRDRVAEELR AHVGR
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=530, Percent_Identity=36.4150943396226, Blast_Score=264, Evalue=2e-70, Organism=Caenorhabditis elegans, GI71997947, Length=529, Percent_Identity=35.1606805293006, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71997952, Length=529, Percent_Identity=35.1606805293006, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI71997955, Length=231, Percent_Identity=43.7229437229437, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24581587, Length=520, Percent_Identity=35, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI161076680, Length=209, Percent_Identity=44.0191387559809, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581595, Length=209, Percent_Identity=44.0191387559809, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI28574709, Length=209, Percent_Identity=44.0191387559809, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581593, Length=209, Percent_Identity=44.0191387559809, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581591, Length=209, Percent_Identity=44.0191387559809, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 51663; Mature: 51532
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPSSPPTSSALFTDLYQLTMMQGYYAHGLHTEEAVFDLYFRKQPFGGGFAVWAGLEPA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHH LELLETLRFSETDLAYLDSLGLFQPEFLTALRGWKFSGRVTAFREGSVVFAHEPLLTVTA HHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCEEEEC PLWEAQLVETALLNTLNFQTLVATKAARCVLAAEASPYGGQIIEFGARRAQGPDGALSAA CHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCHHCCCCCHHHHHH RAAFVGGAVGTSNVEAGRIFGLPLTGTHAHAWVESFPDELTAFRAYAALYPDNTTLLLDT HHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCHHHHHHHHHHHEECCCCCEEEEEC VDTLRSGLPNALIVARELRAAGHELRGVRLDSGDLAYLSSRIRAALDAAGFPDVKIVASN HHHHHCCCCCHHHHHHHHHHCCHHHCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECC DLSESVIASVIAEGGRVDVYGVGTQLATAGGEGGGALGGVFKLAQLGGVPKMKLTGDPAK CCHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEECCCCCC SSLPGVKYVWRGVGEDGQYALDVLTLGEVPCPGQRVSDPTNPLRFARLPDGLAWRDAREV CCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VLEGGRRTGPPETLGQAQARARADLARLPAGTRRPLNPHIYRVSLGDDVAGLRDRVAEEL HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH RAHVGR HHHHCC >Mature Secondary Structure TGPSSPPTSSALFTDLYQLTMMQGYYAHGLHTEEAVFDLYFRKQPFGGGFAVWAGLEPA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHH LELLETLRFSETDLAYLDSLGLFQPEFLTALRGWKFSGRVTAFREGSVVFAHEPLLTVTA HHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCEEEEC PLWEAQLVETALLNTLNFQTLVATKAARCVLAAEASPYGGQIIEFGARRAQGPDGALSAA CHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCHHCCCCCHHHHHH RAAFVGGAVGTSNVEAGRIFGLPLTGTHAHAWVESFPDELTAFRAYAALYPDNTTLLLDT HHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCHHHHHHHHHHHEECCCCCEEEEEC VDTLRSGLPNALIVARELRAAGHELRGVRLDSGDLAYLSSRIRAALDAAGFPDVKIVASN HHHHHCCCCCHHHHHHHHHHCCHHHCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECC DLSESVIASVIAEGGRVDVYGVGTQLATAGGEGGGALGGVFKLAQLGGVPKMKLTGDPAK CCHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEECCCCCC SSLPGVKYVWRGVGEDGQYALDVLTLGEVPCPGQRVSDPTNPLRFARLPDGLAWRDAREV CCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VLEGGRRTGPPETLGQAQARARADLARLPAGTRRPLNPHIYRVSLGDDVAGLRDRVAEEL HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH RAHVGR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]