| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985414
Identifier: 94985414
GI number: 94985414
Start: 1395084
End: 1396298
Strand: Reverse
Name: 94985414
Synonym: Dgeo_1313
Alternate gene names: NA
Gene position: 1396298-1395084 (Counterclockwise)
Preceding gene: 94985415
Following gene: 94985412
Centisome position: 56.59
GC content: 70.78
Gene sequence:
>1215_bases GTGAGACAGAGGCGGGTTGACTTCCTCTTCCTGCTGGGTGTGGTCCTCACGTTGGCCCTGTTGGGGCTGGCCTGGGGTCG CGTTCCCGCACAGGAGTGGCTGGCGCTGCTGCCCCTGAGCGTCTCCTCTCTGCTGCTGGGCGGACTGCTGGCCTGGCTCG GGCGGCTGGAGGTTGAGCAGCGCCCGGTGGCGGACGCTGCGGCGCAGGCGTTGGTGTTGCAGGCTGCGGTGGCGGCTGCC GCCTTCGCCTTTGCTTGGAGCTTGCCGCGCGCCCTCTGCGTGGGCACCGGCCTGGCGCTGGTGGTGATGGGCAACGCCAC GAGTCGCGCCCGCCCTGGCCTGTGGTTTGGCTTTCGCACACGCTGGGCGCTGCTGTCCGAACGGGCCTGGTATGCCACGC AGCGGCAGGCGGCTCCGGCTCTCGTGAGCACCGGTGCCGTATTCACAGTTTTTGCAGCCCTGACGCCCGCACCCGTGCTC ATCCCTTGGGTGTTGCCCGTGGGTCTCCTCGTGTTGCTGGCGCCGGTGGGCATCAGTCTGCACCGCGCGTCCTACCGCGC CTATCTCGCTGACCCGGAGCGGCGGCCCGCCTTCCCCGGTGCGCGCCGTCACCTCCCGCCGCTGACGTCCGTCGAGCGGC TGCTGCTCGCGCTGATGCTGGGGCTGCCGCTGCTGTCGCTGGCAGCGTGCGTGGTGGTGCTGCCCTGGCTGCCGGAGCAG GTCCCGGTGCATTTCGATCTGGCGGGACGGCCCGACCGCTACGGCTCACCGCTGGAGCTGCTCGCGCTGCCCCTGGTGGG TCTGGGGCTGGCCGGCTTCTTCGCGGCGATGATGCGCTTCGGCTCGGCCACCCCGGCGCAGCGGCACCTGCTGCTGCTGA CGGGTGCGCTCGCGGGTGCGCTGACGGCCCCTCTGCCGCTGGGTGTGAGCGGCGACATGTCGCTTCCCCTGGGGCTGGGG CACGTGCTGATGCTGGCTGTCTTGGCACTCGCACTGCTGTTCCCCGGTCCAGATGGGAAACGCCGCCCCCGCCTGGCTGC AGGGCTGGCAACGCTCGCGGCCTTGCTCCTGCCGACCCTGTGTCTTCTCCCCGACCAGGCCGCGCAGCCCGTCGGGATCC TGTTTCTGGTCTTCGGCGGGCTGCTTTTCCTGGTGCCCATGTTGCTTTACGGTGTGCCGCAGCCTACAGCTGGCCGGAGC AAACGCGGCGGGTGA
Upstream 100 bases:
>100_bases CGCGGAACACAAGTGATTTATAGGCTCAATACCACCGTCTTTCAGGAGATGATGGCCGGGCTGCTGGACCTCTTCGGACC TGTGGGAAAGGAGGAGACAG
Downstream 100 bases:
>100_bases GCGGCGGGAAGACCTGGCCCTGGCGGGCACCCGAGAGCAGAGGGAGCTGACCACGCCACGCCCTCACATCCTGCTTGCCG CCCACAGCGCGAGAGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRQRRVDFLFLLGVVLTLALLGLAWGRVPAQEWLALLPLSVSSLLLGGLLAWLGRLEVEQRPVADAAAQALVLQAAVAAA AFAFAWSLPRALCVGTGLALVVMGNATSRARPGLWFGFRTRWALLSERAWYATQRQAAPALVSTGAVFTVFAALTPAPVL IPWVLPVGLLVLLAPVGISLHRASYRAYLADPERRPAFPGARRHLPPLTSVERLLLALMLGLPLLSLAACVVVLPWLPEQ VPVHFDLAGRPDRYGSPLELLALPLVGLGLAGFFAAMMRFGSATPAQRHLLLLTGALAGALTAPLPLGVSGDMSLPLGLG HVLMLAVLALALLFPGPDGKRRPRLAAGLATLAALLLPTLCLLPDQAAQPVGILFLVFGGLLFLVPMLLYGVPQPTAGRS KRGG
Sequences:
>Translated_404_residues MRQRRVDFLFLLGVVLTLALLGLAWGRVPAQEWLALLPLSVSSLLLGGLLAWLGRLEVEQRPVADAAAQALVLQAAVAAA AFAFAWSLPRALCVGTGLALVVMGNATSRARPGLWFGFRTRWALLSERAWYATQRQAAPALVSTGAVFTVFAALTPAPVL IPWVLPVGLLVLLAPVGISLHRASYRAYLADPERRPAFPGARRHLPPLTSVERLLLALMLGLPLLSLAACVVVLPWLPEQ VPVHFDLAGRPDRYGSPLELLALPLVGLGLAGFFAAMMRFGSATPAQRHLLLLTGALAGALTAPLPLGVSGDMSLPLGLG HVLMLAVLALALLFPGPDGKRRPRLAAGLATLAALLLPTLCLLPDQAAQPVGILFLVFGGLLFLVPMLLYGVPQPTAGRS KRGG >Mature_404_residues MRQRRVDFLFLLGVVLTLALLGLAWGRVPAQEWLALLPLSVSSLLLGGLLAWLGRLEVEQRPVADAAAQALVLQAAVAAA AFAFAWSLPRALCVGTGLALVVMGNATSRARPGLWFGFRTRWALLSERAWYATQRQAAPALVSTGAVFTVFAALTPAPVL IPWVLPVGLLVLLAPVGISLHRASYRAYLADPERRPAFPGARRHLPPLTSVERLLLALMLGLPLLSLAACVVVLPWLPEQ VPVHFDLAGRPDRYGSPLELLALPLVGLGLAGFFAAMMRFGSATPAQRHLLLLTGALAGALTAPLPLGVSGDMSLPLGLG HVLMLAVLALALLFPGPDGKRRPRLAAGLATLAALLLPTLCLLPDQAAQPVGILFLVFGGLLFLVPMLLYGVPQPTAGRS KRGG
Specific function: Unknown
COG id: COG5658
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42621; Mature: 42621
Theoretical pI: Translated: 11.74; Mature: 11.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRRVDFLFLLGVVLTLALLGLAWGRVPAQEWLALLPLSVSSLLLGGLLAWLGRLEVEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPVADAAAQALVLQAAVAAAAFAFAWSLPRALCVGTGLALVVMGNATSRARPGLWFGFRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEHHHH RWALLSERAWYATQRQAAPALVSTGAVFTVFAALTPAPVLIPWVLPVGLLVLLAPVGISL HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH HRASYRAYLADPERRPAFPGARRHLPPLTSVERLLLALMLGLPLLSLAACVVVLPWLPEQ HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPVHFDLAGRPDRYGSPLELLALPLVGLGLAGFFAAMMRFGSATPAQRHLLLLTGALAGA CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LTAPLPLGVSGDMSLPLGLGHVLMLAVLALALLFPGPDGKRRPRLAAGLATLAALLLPTL HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CLLPDQAAQPVGILFLVFGGLLFLVPMLLYGVPQPTAGRSKRGG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRQRRVDFLFLLGVVLTLALLGLAWGRVPAQEWLALLPLSVSSLLLGGLLAWLGRLEVEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPVADAAAQALVLQAAVAAAAFAFAWSLPRALCVGTGLALVVMGNATSRARPGLWFGFRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEHHHH RWALLSERAWYATQRQAAPALVSTGAVFTVFAALTPAPVLIPWVLPVGLLVLLAPVGISL HHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH HRASYRAYLADPERRPAFPGARRHLPPLTSVERLLLALMLGLPLLSLAACVVVLPWLPEQ HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPVHFDLAGRPDRYGSPLELLALPLVGLGLAGFFAAMMRFGSATPAQRHLLLLTGALAGA CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LTAPLPLGVSGDMSLPLGLGHVLMLAVLALALLFPGPDGKRRPRLAAGLATLAALLLPTL HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH CLLPDQAAQPVGILFLVFGGLLFLVPMLLYGVPQPTAGRSKRGG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA