| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985398
Identifier: 94985398
GI number: 94985398
Start: 1376861
End: 1377712
Strand: Reverse
Name: 94985398
Synonym: Dgeo_1297
Alternate gene names: NA
Gene position: 1377712-1376861 (Counterclockwise)
Preceding gene: 94985399
Following gene: 94985397
Centisome position: 55.84
GC content: 68.66
Gene sequence:
>852_bases TTGCCTTGCTGCCCCCGCTATCATGCGCGGGTGACTTCGGGCGGCCTGTCAACTCCGCGTTTTCCCGTGCTGGAAGCCCG CTTCGGACCGCTCACGCCGATGGACACGGGCATGCAGAGCCGGGTGTACGCGGCGCCCGGTGGCGACGTGGTGGTCAAGG TGTACCGCACCCAGCGCGGCGAACATCGACTGGAGGCCCAGAACATGCGCCGCGCCGACCTGGGCGAGTGGGTGGTGGAC ACCGTGGAGGCCGACGGCGTGGAGGCGCTGATCCTGCGCCGCTTTCCCGGTCACCCGCTGCGCGCCCAGGACATCCCGGT CGCCCTGCCCCGGCTGCGCGAGATTTTGGCCGCACTCCACCGCGTTCACGAGGGCCGCGTGGATCTGCAGCGGGTCCGTG AGCGCCTCAAGCGCTTTCGCAGCGCGTTGGCTGCCTATCCGCTCGACGACCTGTTCGGCGCCGTGGAAGAACCCCTGGAA CGCGGCCTGCTCGATCAGCCTGCGGCCTTCTGCCACCTCGACCTCTGGCACGACAACATTCTCATCGCGCCGGACGGGGA CGTGCTGGTGATCGACTGGACGAAGGCAGGCTGGGACGACCCCCTGCGCGACATCGCCCTGCTGAAGACCGGCACCCTTG ATCTGCTGGACCGCGACGCCAGCCTCGACGCCGCCCTCACCTTCCTGCCCGATCAATCCACCGCGACCCTCACCCGGCTG CGCGCCTACCTCTCGCTCACGTATCTGCACGACCTGTACTGGTTTCTGATGAACGAACCCTACGAGTTCGACCGCCAGAG GCGCCTGAAGCTGCCCCGGGCCCGGCACGTGTTGGCGCGGCTGCCTGGGTAG
Upstream 100 bases:
>100_bases TGGCGCGTGTGCGGGAAGAGGCGGGAACAAGCCTCGACCCGCGGCTGGTGGGGCGACTGGAGAAACTCCCGCCAGAACGG TAAAGCGAGCATCGGCGTTT
Downstream 100 bases:
>100_bases TGGTGCAGGACCCTGAAGAGGCTGCCGCTCAACACGTTGGCTCAGCACTTCGGCGCAACACTTCGGCGCAACGCCCGGTG TCCACAGGCTGCATGTCCCC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Choline Kinase
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPCCPRYHARVTSGGLSTPRFPVLEARFGPLTPMDTGMQSRVYAAPGGDVVVKVYRTQRGEHRLEAQNMRRADLGEWVVD TVEADGVEALILRRFPGHPLRAQDIPVALPRLREILAALHRVHEGRVDLQRVRERLKRFRSALAAYPLDDLFGAVEEPLE RGLLDQPAAFCHLDLWHDNILIAPDGDVLVIDWTKAGWDDPLRDIALLKTGTLDLLDRDASLDAALTFLPDQSTATLTRL RAYLSLTYLHDLYWFLMNEPYEFDRQRRLKLPRARHVLARLPG
Sequences:
>Translated_283_residues MPCCPRYHARVTSGGLSTPRFPVLEARFGPLTPMDTGMQSRVYAAPGGDVVVKVYRTQRGEHRLEAQNMRRADLGEWVVD TVEADGVEALILRRFPGHPLRAQDIPVALPRLREILAALHRVHEGRVDLQRVRERLKRFRSALAAYPLDDLFGAVEEPLE RGLLDQPAAFCHLDLWHDNILIAPDGDVLVIDWTKAGWDDPLRDIALLKTGTLDLLDRDASLDAALTFLPDQSTATLTRL RAYLSLTYLHDLYWFLMNEPYEFDRQRRLKLPRARHVLARLPG >Mature_282_residues PCCPRYHARVTSGGLSTPRFPVLEARFGPLTPMDTGMQSRVYAAPGGDVVVKVYRTQRGEHRLEAQNMRRADLGEWVVDT VEADGVEALILRRFPGHPLRAQDIPVALPRLREILAALHRVHEGRVDLQRVRERLKRFRSALAAYPLDDLFGAVEEPLER GLLDQPAAFCHLDLWHDNILIAPDGDVLVIDWTKAGWDDPLRDIALLKTGTLDLLDRDASLDAALTFLPDQSTATLTRLR AYLSLTYLHDLYWFLMNEPYEFDRQRRLKLPRARHVLARLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32209; Mature: 32077
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCCPRYHARVTSGGLSTPRFPVLEARFGPLTPMDTGMQSRVYAAPGGDVVVKVYRTQRG CCCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC EHRLEAQNMRRADLGEWVVDTVEADGVEALILRRFPGHPLRAQDIPVALPRLREILAALH CHHHHHHHCCHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHH RVHEGRVDLQRVRERLKRFRSALAAYPLDDLFGAVEEPLERGLLDQPAAFCHLDLWHDNI HHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCE LIAPDGDVLVIDWTKAGWDDPLRDIALLKTGTLDLLDRDASLDAALTFLPDQSTATLTRL EECCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCHHHHHHH RAYLSLTYLHDLYWFLMNEPYEFDRQRRLKLPRARHVLARLPG HHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure PCCPRYHARVTSGGLSTPRFPVLEARFGPLTPMDTGMQSRVYAAPGGDVVVKVYRTQRG CCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC EHRLEAQNMRRADLGEWVVDTVEADGVEALILRRFPGHPLRAQDIPVALPRLREILAALH CHHHHHHHCCHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHH RVHEGRVDLQRVRERLKRFRSALAAYPLDDLFGAVEEPLERGLLDQPAAFCHLDLWHDNI HHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCE LIAPDGDVLVIDWTKAGWDDPLRDIALLKTGTLDLLDRDASLDAALTFLPDQSTATLTRL EECCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCHHHHHHH RAYLSLTYLHDLYWFLMNEPYEFDRQRRLKLPRARHVLARLPG HHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA