Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is yhbW [C]

Identifier: 94985353

GI number: 94985353

Start: 1331379

End: 1332482

Strand: Reverse

Name: yhbW [C]

Synonym: Dgeo_1252

Alternate gene names: 94985353

Gene position: 1332482-1331379 (Counterclockwise)

Preceding gene: 94985356

Following gene: 94985345

Centisome position: 54.01

GC content: 67.66

Gene sequence:

>1104_bases
ATGACCTCGCCGCAGCCCTTTGAACTCGGCATCTATACCTTCGCGGAACGCACTCCCGACCCCATCACCGGCCTCACCGT
CAGCCCCGAGCAGCGGATCAAAGACCTGCTGGAAGAAATCGAGCTGGCCGATCAGGTGGGCCTGGACGTGTTCGGCGTTG
GGGAACATCACCGACCCGACTACCTCGTTTCCGCACCCGCTATCGTTTTGGCAGCGGCAGCCACGCGCACGCGCCGCATT
CGCCTCACCAGTGCCGTGACGGTCCTGGGCACCGAGGACCCGGTGAGGGTGTACCAACAGTTTGCTACGCTCGACCTGAT
CTCCGGGGGCCGCGCCGAGATCATGGCGGGCCGCGGTTCCTTCGCGGAGTCCTTTCCGCTGTTCTTGGGTGGGCCGCCGC
TGGACTACGACGCGCTCTTTGCCGAGAAACTCGACCTGCTGCTCAAGGTCCGCGAACACGAACACGTCGTCTGGCAGGGA
CGCACCCGGCCCGCCCTGCGCGGCGAAGGGGTCTACCCGCGCCACCTGCAGCAGGAGCTGCCGATTTGGCTGGCGGTCGG
CGGCACGCCTTCCTCCGCTCGCCGCGCGGGAACCCTGGGGCTGCCGATGGCCCTCGCCATCATCGGCGGGATGCCGGAGC
GCTTTGTGCCCTTGGTGAAGCTCTTTCGCGAGGCGGCCCGCGCTGCCGGACATCCCCAGCTGCCCCTGGGCATCAACTCG
CACGGCTTTCTCGCGTCCACCTCGCAGCAGGCGGCGGACCTGGCCTTTCCAGTGCACGCGGCCGTGATGAACCAGCTGGG
CCGCGAGCGCGGCTGGCCGCCCATGACGCGCGCGCACTTCGAGGGCGACCGTTCGTTGCGCGGCGCACTCTTCGTCGGTG
ACCCCGAGCAGGTTATCGAGAAGATCCTTTTTCAGCACGAGCTGTTCGGACACCAGCGCTTTCTGCTGCAGATGAGCGTC
GGTACCCTGCCGCACGCCCAGATGATGAAGTCCATCGAGCTGTACGGCACTGAGGTCGCCCCCGCCGTTCGGGCCGAGAT
CGCCCGCCGGAATGCTCGCCTCGCCGCCCCTCAGGGTGCCCAGTCCGCCAGCGGCAGCGCGTAA

Upstream 100 bases:

>100_bases
GTTCCTCAAGGAGAGACGGCAGAAGGCTCTTTCTTCAATCGGCAAACGCCTTTATTCTCTAAAGCAAGCGAACCGAAACC
CTCGCTTTCAGGAGACCTCC

Downstream 100 bases:

>100_bases
GGGTGGACGTAAGGGTGGAGACGACCGCTAGCTGCCCGGCGACGGCGCGGGTTCGATGCCGGTCGCGTACAGGTCGTCGC
CGCGGGCCTCCAGCTGTACC

Product: luciferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTSPQPFELGIYTFAERTPDPITGLTVSPEQRIKDLLEEIELADQVGLDVFGVGEHHRPDYLVSAPAIVLAAAATRTRRI
RLTSAVTVLGTEDPVRVYQQFATLDLISGGRAEIMAGRGSFAESFPLFLGGPPLDYDALFAEKLDLLLKVREHEHVVWQG
RTRPALRGEGVYPRHLQQELPIWLAVGGTPSSARRAGTLGLPMALAIIGGMPERFVPLVKLFREAARAAGHPQLPLGINS
HGFLASTSQQAADLAFPVHAAVMNQLGRERGWPPMTRAHFEGDRSLRGALFVGDPEQVIEKILFQHELFGHQRFLLQMSV
GTLPHAQMMKSIELYGTEVAPAVRAEIARRNARLAAPQGAQSASGSA

Sequences:

>Translated_367_residues
MTSPQPFELGIYTFAERTPDPITGLTVSPEQRIKDLLEEIELADQVGLDVFGVGEHHRPDYLVSAPAIVLAAAATRTRRI
RLTSAVTVLGTEDPVRVYQQFATLDLISGGRAEIMAGRGSFAESFPLFLGGPPLDYDALFAEKLDLLLKVREHEHVVWQG
RTRPALRGEGVYPRHLQQELPIWLAVGGTPSSARRAGTLGLPMALAIIGGMPERFVPLVKLFREAARAAGHPQLPLGINS
HGFLASTSQQAADLAFPVHAAVMNQLGRERGWPPMTRAHFEGDRSLRGALFVGDPEQVIEKILFQHELFGHQRFLLQMSV
GTLPHAQMMKSIELYGTEVAPAVRAEIARRNARLAAPQGAQSASGSA
>Mature_366_residues
TSPQPFELGIYTFAERTPDPITGLTVSPEQRIKDLLEEIELADQVGLDVFGVGEHHRPDYLVSAPAIVLAAAATRTRRIR
LTSAVTVLGTEDPVRVYQQFATLDLISGGRAEIMAGRGSFAESFPLFLGGPPLDYDALFAEKLDLLLKVREHEHVVWQGR
TRPALRGEGVYPRHLQQELPIWLAVGGTPSSARRAGTLGLPMALAIIGGMPERFVPLVKLFREAARAAGHPQLPLGINSH
GFLASTSQQAADLAFPVHAAVMNQLGRERGWPPMTRAHFEGDRSLRGALFVGDPEQVIEKILFQHELFGHQRFLLQMSVG
TLPHAQMMKSIELYGTEVAPAVRAEIARRNARLAAPQGAQSASGSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 39972; Mature: 39841

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPQPFELGIYTFAERTPDPITGLTVSPEQRIKDLLEEIELADQVGLDVFGVGEHHRPD
CCCCCCEEEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
YLVSAPAIVLAAAATRTRRIRLTSAVTVLGTEDPVRVYQQFATLDLISGGRAEIMAGRGS
EEECCCHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
FAESFPLFLGGPPLDYDALFAEKLDLLLKVREHEHVVWQGRTRPALRGEGVYPRHLQQEL
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHC
PIWLAVGGTPSSARRAGTLGLPMALAIIGGMPERFVPLVKLFREAARAAGHPQLPLGINS
CEEEEECCCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HGFLASTSQQAADLAFPVHAAVMNQLGRERGWPPMTRAHFEGDRSLRGALFVGDPEQVIE
CCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEECCHHHHHH
KILFQHELFGHQRFLLQMSVGTLPHAQMMKSIELYGTEVAPAVRAEIARRNARLAAPQGA
HHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
QSASGSA
CCCCCCC
>Mature Secondary Structure 
TSPQPFELGIYTFAERTPDPITGLTVSPEQRIKDLLEEIELADQVGLDVFGVGEHHRPD
CCCCCEEEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
YLVSAPAIVLAAAATRTRRIRLTSAVTVLGTEDPVRVYQQFATLDLISGGRAEIMAGRGS
EEECCCHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
FAESFPLFLGGPPLDYDALFAEKLDLLLKVREHEHVVWQGRTRPALRGEGVYPRHLQQEL
CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHC
PIWLAVGGTPSSARRAGTLGLPMALAIIGGMPERFVPLVKLFREAARAAGHPQLPLGINS
CEEEEECCCCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
HGFLASTSQQAADLAFPVHAAVMNQLGRERGWPPMTRAHFEGDRSLRGALFVGDPEQVIE
CCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEECCHHHHHH
KILFQHELFGHQRFLLQMSVGTLPHAQMMKSIELYGTEVAPAVRAEIARRNARLAAPQGA
HHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
QSASGSA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]