| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985338
Identifier: 94985338
GI number: 94985338
Start: 1316428
End: 1317180
Strand: Reverse
Name: 94985338
Synonym: Dgeo_1237
Alternate gene names: NA
Gene position: 1317180-1316428 (Counterclockwise)
Preceding gene: 94985345
Following gene: 94985331
Centisome position: 53.39
GC content: 71.98
Gene sequence:
>753_bases GTGACGTACAGCAAGAAGCGCTCTCTGCTGCTCGCTCTCGCCGCCCTGCCGCTGTCGGCGGGTCTGGTGTTCGCGGCGGG CACCTCGTCCATCACGCCCCAGCCCGCCCAGCCGGGGCAGACCCAAGGCCAGGGCCGCACCCCCTACACCGACGTCTTTC TTCAGAAACTCGCTGCCCAGCTTGGTCTCAGTGTGGACCGCCTACGGGCTGCCGCCACCAGCGCCGCGAACGCCACCATT GACCAGGCGGTGCGGGCCGGAGACCTCCCCCAGAACCGTGCCGCCGAACTCAAGGCCCGGGTGCAGGTTGCCCCGCTGAA CTTCGGCTTGGGCGGCAGGCCTAGACCTGAGCGCGGACCCGCGGAGCCAGGCGAACGCCGCCCGCGGGCGGGCTTGGGCC GGGCGGTTACGGCCGCCGTTGCCCGAACCCTTGGCCTCAGCGAGCAGGCTTTGCGGGCGCAGCTGCGCAGTGGGCAGACC GTGACTCAGCTCGCGCAGGCCACGGGCCTCAGCACCCAGACTGTCCGGAGTGCCGCCCTTGCCGCCCTGAAGAGCGAGCT GGCCCGCGAGGTGCAGGCCGGGCGCCTCACCCAGGCCCAAGCTGACCAGCGTCTCGCCCGCGCCCAGGCGGATACGAGCT TTGGCCTGGCGCTCGGGCGGGGCGGGTCGGGCAGGCATGATGGACCGAACGCCCCGCGCGGCCTGACTCCACCTGTCAAT CCCGCAAGCAGCACCAACCGCGCGAACACCTGA
Upstream 100 bases:
>100_bases AATCAGAGCAGTCCCGTTTTAGCCGCTGTTTAACCGGCTTCCCCCACATTGTCACCACCGATCAGGCTGACCGGCGATCT CACCCTAGGAGTGTAGTTTC
Downstream 100 bases:
>100_bases TCCTCAGAGAAGACGAAGGGGCGGCCTCCCGGTTGGAAGCCGCCCCTCTCTGACCTGATCCTCGTGTGGCGGACGCTTAC GCCTGCGCCACTTCGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTYSKKRSLLLALAALPLSAGLVFAAGTSSITPQPAQPGQTQGQGRTPYTDVFLQKLAAQLGLSVDRLRAAATSAANATI DQAVRAGDLPQNRAAELKARVQVAPLNFGLGGRPRPERGPAEPGERRPRAGLGRAVTAAVARTLGLSEQALRAQLRSGQT VTQLAQATGLSTQTVRSAALAALKSELAREVQAGRLTQAQADQRLARAQADTSFGLALGRGGSGRHDGPNAPRGLTPPVN PASSTNRANT
Sequences:
>Translated_250_residues MTYSKKRSLLLALAALPLSAGLVFAAGTSSITPQPAQPGQTQGQGRTPYTDVFLQKLAAQLGLSVDRLRAAATSAANATI DQAVRAGDLPQNRAAELKARVQVAPLNFGLGGRPRPERGPAEPGERRPRAGLGRAVTAAVARTLGLSEQALRAQLRSGQT VTQLAQATGLSTQTVRSAALAALKSELAREVQAGRLTQAQADQRLARAQADTSFGLALGRGGSGRHDGPNAPRGLTPPVN PASSTNRANT >Mature_249_residues TYSKKRSLLLALAALPLSAGLVFAAGTSSITPQPAQPGQTQGQGRTPYTDVFLQKLAAQLGLSVDRLRAAATSAANATID QAVRAGDLPQNRAAELKARVQVAPLNFGLGGRPRPERGPAEPGERRPRAGLGRAVTAAVARTLGLSEQALRAQLRSGQTV TQLAQATGLSTQTVRSAALAALKSELAREVQAGRLTQAQADQRLARAQADTSFGLALGRGGSGRHDGPNAPRGLTPPVNP ASSTNRANT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25788; Mature: 25657
Theoretical pI: Translated: 12.24; Mature: 12.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSKKRSLLLALAALPLSAGLVFAAGTSSITPQPAQPGQTQGQGRTPYTDVFLQKLAAQ CCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGLSVDRLRAAATSAANATIDQAVRAGDLPQNRAAELKARVQVAPLNFGLGGRPRPERGP HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC AEPGERRPRAGLGRAVTAAVARTLGLSEQALRAQLRSGQTVTQLAQATGLSTQTVRSAAL CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH AALKSELAREVQAGRLTQAQADQRLARAQADTSFGLALGRGGSGRHDGPNAPRGLTPPVN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCEEECCCCCCCCCCCCCCCCCCCCCC PASSTNRANT CCCCCCCCCC >Mature Secondary Structure TYSKKRSLLLALAALPLSAGLVFAAGTSSITPQPAQPGQTQGQGRTPYTDVFLQKLAAQ CCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGLSVDRLRAAATSAANATIDQAVRAGDLPQNRAAELKARVQVAPLNFGLGGRPRPERGP HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC AEPGERRPRAGLGRAVTAAVARTLGLSEQALRAQLRSGQTVTQLAQATGLSTQTVRSAAL CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH AALKSELAREVQAGRLTQAQADQRLARAQADTSFGLALGRGGSGRHDGPNAPRGLTPPVN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCEEECCCCCCCCCCCCCCCCCCCCCC PASSTNRANT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA