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The map label for this gene is ywnA [H]

Identifier: 94985327

GI number: 94985327

Start: 1305806

End: 1306252

Strand: Reverse

Name: ywnA [H]

Synonym: Dgeo_1225

Alternate gene names: 94985327

Gene position: 1306252-1305806 (Counterclockwise)

Preceding gene: 94985328

Following gene: 94985326

Centisome position: 52.94

GC content: 69.57

Gene sequence:

>447_bases
ATGACGACGGGGAGTGCTTCCACGGGCAAACTCAGCACGCGCACGGCGATGGCGGTTCATATTCTCACGCTGGTGGGGGC
AAATCCCGATGTGGCGCATTCGAGCGAGTGGTTGGCAGGCAGCCTAGGCGTTCACCCCGTGATGGTGCGGCAGGTCACGT
CCCGCCTGCGCGCCGCCGGACTGGTGGAGACGCGCCGGGGCAAGGCGGGGTTGCGTCTAACCCGTCCGGCGTCTGCCATG
ACGCTGCTCGATGTGTACCGCGCCGTCGAGGACGGGGACGCCCTGCTCGCCCTGCACGCCCGCCCCAACCCGTCTTGCCC
AGTCGGCTCCGGCATTCAGGCCGTGCTGGAGGACGTGTTCGAGGAGGCGCGGACGGCCTTTGAGCGCTCCCTCGCCGCCC
GCACCGTCGCAGACGTGATGGCCCGGGTGCTCTCCCGTGCTGGGTGA

Upstream 100 bases:

>100_bases
GGCCCCCTGCCTAGGACGGACGGCGCAGGCAGGGGAGAGCAAGAGGGGAACTTGACGGCCGCGAGAGTTGTAATTACTCT
GATTACAGGTTGGTGACGAG

Downstream 100 bases:

>100_bases
GCGTCGTTCTGCTGTTTCCAACCTGTAATCCTTTCGCCTACATGTCTTTTCTGGAGGTCTGCCCATGAACATCCTGCTGA
TCGGCGGCACCGGCATGGTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTGSASTGKLSTRTAMAVHILTLVGANPDVAHSSEWLAGSLGVHPVMVRQVTSRLRAAGLVETRRGKAGLRLTRPASAM
TLLDVYRAVEDGDALLALHARPNPSCPVGSGIQAVLEDVFEEARTAFERSLAARTVADVMARVLSRAG

Sequences:

>Translated_148_residues
MTTGSASTGKLSTRTAMAVHILTLVGANPDVAHSSEWLAGSLGVHPVMVRQVTSRLRAAGLVETRRGKAGLRLTRPASAM
TLLDVYRAVEDGDALLALHARPNPSCPVGSGIQAVLEDVFEEARTAFERSLAARTVADVMARVLSRAG
>Mature_147_residues
TTGSASTGKLSTRTAMAVHILTLVGANPDVAHSSEWLAGSLGVHPVMVRQVTSRLRAAGLVETRRGKAGLRLTRPASAMT
LLDVYRAVEDGDALLALHARPNPSCPVGSGIQAVLEDVFEEARTAFERSLAARTVADVMARVLSRAG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15544; Mature: 15413

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGSASTGKLSTRTAMAVHILTLVGANPDVAHSSEWLAGSLGVHPVMVRQVTSRLRAAG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH
LVETRRGKAGLRLTRPASAMTLLDVYRAVEDGDALLALHARPNPSCPVGSGIQAVLEDVF
HHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
EEARTAFERSLAARTVADVMARVLSRAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTGSASTGKLSTRTAMAVHILTLVGANPDVAHSSEWLAGSLGVHPVMVRQVTSRLRAAG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHH
LVETRRGKAGLRLTRPASAMTLLDVYRAVEDGDALLALHARPNPSCPVGSGIQAVLEDVF
HHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
EEARTAFERSLAARTVADVMARVLSRAG
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]