| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985289
Identifier: 94985289
GI number: 94985289
Start: 1258716
End: 1259252
Strand: Reverse
Name: 94985289
Synonym: Dgeo_1187
Alternate gene names: NA
Gene position: 1259252-1258716 (Counterclockwise)
Preceding gene: 94985294
Following gene: 94985282
Centisome position: 51.04
GC content: 64.62
Gene sequence:
>537_bases ATGTCGCGCGTGCCCAGCGGACGCGTCCACAATCTCATCAACATCGCCGCCTACAGTGTCCTTGCTGCCGGGGTGCTGGT CGCTGCCCAGCAGAATCTCCTGACCGTCACACCGCTCCAGGCCCTCCACTTCACGGTGGGCTTCTTTGTCGGTACATTTC TGCTCTCACCCGATCTCGACCTCGCAGAAGGGCAGGTGGACAGCAAGCGGCGCTGGGGTTGGCTGGGTTTCCTGTGGGTG CCGTATGGGATGCTCTGCCGTCACCGTGGCCTTTCGCATACCTGGCTGGTGGGGCCGCTCACGCGCCTGGCCTATCTGGC CGTCATCGCGGCGTTGCTGCTCGGCCTGCTGCGCTTCGTGTGGCCCGCCTTTCCTGTCCCGGCTATCCCGCAACCTCTCA GTCTGAAGCTGCTGCTGCCCCTCTTGGCGGGCTACTACCTCAGCCAGTGGCTGCACCTGATCGCCGACGGCGTGCGGCCC GACCACGGGTTACGGCAGGCGCGGAAGACCGTAAAAAGGGTCAGGAAGACGTTCTAG
Upstream 100 bases:
>100_bases CAGCAGCGCGGCTGTCAGCAGAGCAGAACCTCGTCGCATGTGCCCTGCAGCATGCCGCATTTTGGCCAGCGCTTGGTGAA GTCCGTCCAGCCGGGGCAGA
Downstream 100 bases:
>100_bases AGCGGGGAGAGGCTGTTTCCTGCCGCTATCTGTTGCGTTCTCTGCTCGTGCTGGCACTGCTCCTCCTGGGCGTGAAGTGG TGGACCCCCGATCCGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSRVPSGRVHNLINIAAYSVLAAGVLVAAQQNLLTVTPLQALHFTVGFFVGTFLLSPDLDLAEGQVDSKRRWGWLGFLWV PYGMLCRHRGLSHTWLVGPLTRLAYLAVIAALLLGLLRFVWPAFPVPAIPQPLSLKLLLPLLAGYYLSQWLHLIADGVRP DHGLRQARKTVKRVRKTF
Sequences:
>Translated_178_residues MSRVPSGRVHNLINIAAYSVLAAGVLVAAQQNLLTVTPLQALHFTVGFFVGTFLLSPDLDLAEGQVDSKRRWGWLGFLWV PYGMLCRHRGLSHTWLVGPLTRLAYLAVIAALLLGLLRFVWPAFPVPAIPQPLSLKLLLPLLAGYYLSQWLHLIADGVRP DHGLRQARKTVKRVRKTF >Mature_177_residues SRVPSGRVHNLINIAAYSVLAAGVLVAAQQNLLTVTPLQALHFTVGFFVGTFLLSPDLDLAEGQVDSKRRWGWLGFLWVP YGMLCRHRGLSHTWLVGPLTRLAYLAVIAALLLGLLRFVWPAFPVPAIPQPLSLKLLLPLLAGYYLSQWLHLIADGVRPD HGLRQARKTVKRVRKTF
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19822; Mature: 19691
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVPSGRVHNLINIAAYSVLAAGVLVAAQQNLLTVTPLQALHFTVGFFVGTFLLSPDLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCC LAEGQVDSKRRWGWLGFLWVPYGMLCRHRGLSHTWLVGPLTRLAYLAVIAALLLGLLRFV HHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WPAFPVPAIPQPLSLKLLLPLLAGYYLSQWLHLIADGVRPDHGLRQARKTVKRVRKTF HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRVPSGRVHNLINIAAYSVLAAGVLVAAQQNLLTVTPLQALHFTVGFFVGTFLLSPDLD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHCCCCC LAEGQVDSKRRWGWLGFLWVPYGMLCRHRGLSHTWLVGPLTRLAYLAVIAALLLGLLRFV HHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WPAFPVPAIPQPLSLKLLLPLLAGYYLSQWLHLIADGVRPDHGLRQARKTVKRVRKTF HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA