| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is thrA [C]
Identifier: 94985229
GI number: 94985229
Start: 1198797
End: 1200209
Strand: Reverse
Name: thrA [C]
Synonym: Dgeo_1127
Alternate gene names: 94985229
Gene position: 1200209-1198797 (Counterclockwise)
Preceding gene: 94985230
Following gene: 94985226
Centisome position: 48.65
GC content: 69.36
Gene sequence:
>1413_bases ATGGCGTATTCGCTCCTCGTGATGAAGTTCGGCGGCACCAACATGCAGGATGCCCAGGCGATCCGCCACAGCGCCTCGCT GGCGGCCCGCAGCATCCGCGAAGGCGTCAAGGTGGTGGTGGTGGTGTCCGCGATGGCAGGCGTGACCAATCAGCTGCTGG GGCTGGCCGACGCGGCGCAGCGCGGCGATATCGCAACGGCCAACGATGAGATTGCGGCGCTGCGCACCCGCCACTTTGCA GCGGCCCAGGAACTCGGCGCAGCGCCCGATAGTGAGGTGGTGCGTGAGATCCGCGAGCTGCACGAGACGCTGCGCCAGGC CGTGTATGGCGTGTACCTGCTGCGCGAACTCACCCCCCGCAGCCGCGACCTGATTGTCGCCTTTGGTGAGCGGTTCAGCG CCCCGCTGATGCGTCTGGCGCTGGAGGGGCAGGGCCTTTTGGCCCACCACCTCACCGGCGGGCAGGCGGGCATCACCACG GACACGCACTTCGGCAACGCGCGTCCCCTGCCGGGTACCTACGAACGCATCCGCGACCGACTGGGCGGCCTGCTGGCAGC GGGCGTCACACCAGTCGTGGCGGGCTTCATGGGCGAGACCGAGGAGGGGGCCATCACCACCCTGGGCCGCGGCGGCACCG ACTTTTCTGCCACGATCATCGGCAAGGCGCTGGACGCCGACGAGGTGTGGGCCTGGAAGGACGTGGACGGCGTGATGAGC GCCGATCCACGCGTCGTGCCAGACGCCCGCAACATCGAGGTCCTCAGCTACGGGGAGGTGATGGAGCTCGCCTACTTTGG CGCGAAGGTGCTGCATCCCCTCGCGGTGACGCCCCTCCAGGAAAGCGGGATTCCCCTGCGCGTGAAGAGTGCCGCCGATC CCGACTTTCCCGGCACGCTGGTGCAGGAGGGCGCCCACAACGAGGCGGGCCATCCGGTCAAGGCGGTGACCGCCATCCGC CGCGTGAGCATCATCAACGTGACCGGCGCTGGGGTGTTGGGCGTGCCGGAGGTGGTGGCCAGCCTGTTCGAGGCCATCGC CCGCGAGAACATCACCCTGCTGATGGTGTCTCAGAGCAGCTCCATGAGCAATGTCTCGCTGGCGGTGCAGAGCGCCGACG CCGCGCGGACCCTCGACGCGCTGCGCCGCAGGGTGACCGGCGAGCTGAACATCGAGGAGCAGCCCGGCGTGGCGGTCCTC GCGATCGTGGGCGCGGGGATGCGCGGTCAGAAGGGGGTGGCCGCGCGGCTGTTTGGCGCGCTCGCCGCTGCCGACGTCAA CATCCTGATGATCAGCCAGGGGTCCAGCGAGCTGAACATCAGTGTGGCCCTCGAGGACGCCCAGGTTGAGCGGGCCACCC GCGCCGTTCACGCGGCCTTTGGGCTGGGGCAGACGGCAGCGGCGGCGGACTGA
Upstream 100 bases:
>100_bases GGGCACCACCCCCCCGCCGGCTCACCCTGTGTTGCCCTGAACGTCCCCCTGCCCAGACGCCCGCCCCCGGCTGCGGCACG GGGGCGGCATACTGGGCCGC
Downstream 100 bases:
>100_bases CGGACCGCAGACTAGGGTCTGTCTGGCTGAATTTAGGAAAATGGGGGTATGGGACGGACGGATTTAACCGAGCAACAGTG GGTGAAATTGGCCCCCCTGC
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MAYSLLVMKFGGTNMQDAQAIRHSASLAARSIREGVKVVVVVSAMAGVTNQLLGLADAAQRGDIATANDEIAALRTRHFA AAQELGAAPDSEVVREIRELHETLRQAVYGVYLLRELTPRSRDLIVAFGERFSAPLMRLALEGQGLLAHHLTGGQAGITT DTHFGNARPLPGTYERIRDRLGGLLAAGVTPVVAGFMGETEEGAITTLGRGGTDFSATIIGKALDADEVWAWKDVDGVMS ADPRVVPDARNIEVLSYGEVMELAYFGAKVLHPLAVTPLQESGIPLRVKSAADPDFPGTLVQEGAHNEAGHPVKAVTAIR RVSIINVTGAGVLGVPEVVASLFEAIARENITLLMVSQSSSMSNVSLAVQSADAARTLDALRRRVTGELNIEEQPGVAVL AIVGAGMRGQKGVAARLFGALAAADVNILMISQGSSELNISVALEDAQVERATRAVHAAFGLGQTAAAAD
Sequences:
>Translated_470_residues MAYSLLVMKFGGTNMQDAQAIRHSASLAARSIREGVKVVVVVSAMAGVTNQLLGLADAAQRGDIATANDEIAALRTRHFA AAQELGAAPDSEVVREIRELHETLRQAVYGVYLLRELTPRSRDLIVAFGERFSAPLMRLALEGQGLLAHHLTGGQAGITT DTHFGNARPLPGTYERIRDRLGGLLAAGVTPVVAGFMGETEEGAITTLGRGGTDFSATIIGKALDADEVWAWKDVDGVMS ADPRVVPDARNIEVLSYGEVMELAYFGAKVLHPLAVTPLQESGIPLRVKSAADPDFPGTLVQEGAHNEAGHPVKAVTAIR RVSIINVTGAGVLGVPEVVASLFEAIARENITLLMVSQSSSMSNVSLAVQSADAARTLDALRRRVTGELNIEEQPGVAVL AIVGAGMRGQKGVAARLFGALAAADVNILMISQGSSELNISVALEDAQVERATRAVHAAFGLGQTAAAAD >Mature_469_residues AYSLLVMKFGGTNMQDAQAIRHSASLAARSIREGVKVVVVVSAMAGVTNQLLGLADAAQRGDIATANDEIAALRTRHFAA AQELGAAPDSEVVREIRELHETLRQAVYGVYLLRELTPRSRDLIVAFGERFSAPLMRLALEGQGLLAHHLTGGQAGITTD THFGNARPLPGTYERIRDRLGGLLAAGVTPVVAGFMGETEEGAITTLGRGGTDFSATIIGKALDADEVWAWKDVDGVMSA DPRVVPDARNIEVLSYGEVMELAYFGAKVLHPLAVTPLQESGIPLRVKSAADPDFPGTLVQEGAHNEAGHPVKAVTAIRR VSIINVTGAGVLGVPEVVASLFEAIARENITLLMVSQSSSMSNVSLAVQSADAARTLDALRRRVTGELNIEEQPGVAVLA IVGAGMRGQKGVAARLFGALAAADVNILMISQGSSELNISVALEDAQVERATRAVHAAFGLGQTAAAAD
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=463, Percent_Identity=31.5334773218143, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI1790455, Length=462, Percent_Identity=30.5194805194805, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1790376, Length=416, Percent_Identity=27.8846153846154, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6320893, Length=496, Percent_Identity=26.008064516129, Blast_Score=176, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 49239; Mature: 49108
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSLLVMKFGGTNMQDAQAIRHSASLAARSIREGVKVVVVVSAMAGVTNQLLGLADAAQ CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHH RGDIATANDEIAALRTRHFAAAQELGAAPDSEVVREIRELHETLRQAVYGVYLLRELTPR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRDLIVAFGERFSAPLMRLALEGQGLLAHHLTGGQAGITTDTHFGNARPLPGTYERIRDR CCCEEEEECCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LGGLLAAGVTPVVAGFMGETEEGAITTLGRGGTDFSATIIGKALDADEVWAWKDVDGVMS HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCHHC ADPRVVPDARNIEVLSYGEVMELAYFGAKVLHPLAVTPLQESGIPLRVKSAADPDFPGTL CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHH VQEGAHNEAGHPVKAVTAIRRVSIINVTGAGVLGVPEVVASLFEAIARENITLLMVSQSS HHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCC SMSNVSLAVQSADAARTLDALRRRVTGELNIEEQPGVAVLAIVGAGMRGQKGVAARLFGA CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH LAAADVNILMISQGSSELNISVALEDAQVERATRAVHAAFGLGQTAAAAD HHHCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure AYSLLVMKFGGTNMQDAQAIRHSASLAARSIREGVKVVVVVSAMAGVTNQLLGLADAAQ CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHH RGDIATANDEIAALRTRHFAAAQELGAAPDSEVVREIRELHETLRQAVYGVYLLRELTPR CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRDLIVAFGERFSAPLMRLALEGQGLLAHHLTGGQAGITTDTHFGNARPLPGTYERIRDR CCCEEEEECCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LGGLLAAGVTPVVAGFMGETEEGAITTLGRGGTDFSATIIGKALDADEVWAWKDVDGVMS HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCHHC ADPRVVPDARNIEVLSYGEVMELAYFGAKVLHPLAVTPLQESGIPLRVKSAADPDFPGTL CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHH VQEGAHNEAGHPVKAVTAIRRVSIINVTGAGVLGVPEVVASLFEAIARENITLLMVSQSS HHCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCC SMSNVSLAVQSADAARTLDALRRRVTGELNIEEQPGVAVLAIVGAGMRGQKGVAARLFGA CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH LAAADVNILMISQGSSELNISVALEDAQVERATRAVHAAFGLGQTAAAAD HHHCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]