| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ycjU [C]
Identifier: 94985216
GI number: 94985216
Start: 1182856
End: 1183542
Strand: Reverse
Name: ycjU [C]
Synonym: Dgeo_1113
Alternate gene names: 94985216
Gene position: 1183542-1182856 (Counterclockwise)
Preceding gene: 94985218
Following gene: 94985215
Centisome position: 47.97
GC content: 69.0
Gene sequence:
>687_bases ATGAAGACGCCACAGCGCATCCAGGCCGTCCTGTTTGACCGTGACGACACGCTGGCTTTGACCGACCCGGAGGTTTACCA CGCGGCGGCGCGCTGGATCGCCGAACACTTTGGCCTGGACGCGCGGCGGGCCGGGGAAGCGCTGCGGGCGCAGTGGCAGG AACGGGCCTTCTCGTGGTGGGACCTGCGAACCCTCGAGGAGGAGGACGCCTTTTGGCGGCAGTACGGCGAGGAACTGGCT GGGCGGCTGGGCCTCGATCCGGTCCATGCCGCCGAGCTGCTGACGGCCTATCCCTACGAGCGGTACCTGAAGCCGGTGCC GGGCGCACGGGAGGTGCTGACCGAACTGCGCGCGCGCGGCCTGAGGATCGGGGTGCTGAGCAACACCTTGCCGAGCATTG ACCGGACCCTCACGGCGCTGGGGTTGGCGGACTTGGTGGATGTGGCGGTGGCGAGCTGCACGGCTGGAGTGCACAAGCCG GAGCCGGGAGCCTTTGAATACGCGCTCACGAGGCTCGGGCTGCCCGCCGAAACGGTGCTGTTTGTGGATGACCGGCCTGA GAACGTCGCAGCCGCGCGCGCGCTGGGGCTGCAGGCGGTGCAGATCGACCTGACAGGTGAAGCGCCAGACGCGCTGCATG ACCTGTGGGCGGTCCTGGAGCTGGTCGGGGAACCGGTGAGGCCGTGA
Upstream 100 bases:
>100_bases ATCGAGCGCCCGCCAGGCCAGAACCACAAGTGCATCGTTTCACGATCCATCAGGACGTGAAGGTCTTCTTCTGTGCGGGG AACGCTCTAGAATCTGACGG
Downstream 100 bases:
>100_bases GCCTGATGCTGATAGACGGCCACCTGGACCTCGCCTACAACGCCGCGCGCGGGCGCGATCTCACCCTCCCGCTGGCGGCG CTGCGGAAAGCCGATTCGGT
Product: HAD family hydrolase
Products: Beta-D-Glucose 6- Phosphate. [C]
Alternate protein names: Haloacid Dehalogenase Type II; HAD Family Hydrolase; HAD-Superfamily Hydrolase Subfamily IA; CbbY/CbbZ/GpH/YieH Family Hydrolase; Hydrolase Related 2-Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKTPQRIQAVLFDRDDTLALTDPEVYHAAARWIAEHFGLDARRAGEALRAQWQERAFSWWDLRTLEEEDAFWRQYGEELA GRLGLDPVHAAELLTAYPYERYLKPVPGAREVLTELRARGLRIGVLSNTLPSIDRTLTALGLADLVDVAVASCTAGVHKP EPGAFEYALTRLGLPAETVLFVDDRPENVAAARALGLQAVQIDLTGEAPDALHDLWAVLELVGEPVRP
Sequences:
>Translated_228_residues MKTPQRIQAVLFDRDDTLALTDPEVYHAAARWIAEHFGLDARRAGEALRAQWQERAFSWWDLRTLEEEDAFWRQYGEELA GRLGLDPVHAAELLTAYPYERYLKPVPGAREVLTELRARGLRIGVLSNTLPSIDRTLTALGLADLVDVAVASCTAGVHKP EPGAFEYALTRLGLPAETVLFVDDRPENVAAARALGLQAVQIDLTGEAPDALHDLWAVLELVGEPVRP >Mature_228_residues MKTPQRIQAVLFDRDDTLALTDPEVYHAAARWIAEHFGLDARRAGEALRAQWQERAFSWWDLRTLEEEDAFWRQYGEELA GRLGLDPVHAAELLTAYPYERYLKPVPGAREVLTELRARGLRIGVLSNTLPSIDRTLTALGLADLVDVAVASCTAGVHKP EPGAFEYALTRLGLPAETVLFVDDRPENVAAARALGLQAVQIDLTGEAPDALHDLWAVLELVGEPVRP
Specific function: Reversible Transformation Of Glucose 6-Phosphate And Beta-Glucose 1-Phosphate (By Similarity). [C]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=227, Percent_Identity=28.6343612334802, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI211971008, Length=215, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24639695, Length=248, Percent_Identity=29.0322580645161, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.4.2.6 [C]
Molecular weight: Translated: 25255; Mature: 25255
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPQRIQAVLFDRDDTLALTDPEVYHAAARWIAEHFGLDARRAGEALRAQWQERAFSWW CCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH DLRTLEEEDAFWRQYGEELAGRLGLDPVHAAELLTAYPYERYLKPVPGAREVLTELRARG HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCC LRIGVLSNTLPSIDRTLTALGLADLVDVAVASCTAGVHKPEPGAFEYALTRLGLPAETVL EEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEE FVDDRPENVAAARALGLQAVQIDLTGEAPDALHDLWAVLELVGEPVRP EECCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKTPQRIQAVLFDRDDTLALTDPEVYHAAARWIAEHFGLDARRAGEALRAQWQERAFSWW CCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHH DLRTLEEEDAFWRQYGEELAGRLGLDPVHAAELLTAYPYERYLKPVPGAREVLTELRARG HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHCC LRIGVLSNTLPSIDRTLTALGLADLVDVAVASCTAGVHKPEPGAFEYALTRLGLPAETVL EEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEE FVDDRPENVAAARALGLQAVQIDLTGEAPDALHDLWAVLELVGEPVRP EECCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Beta-D-Glucose 1-Phosphate [C]
Specific reaction: Beta-D-Glucose 1-Phosphate = Beta-D-Glucose 6- Phosphate. [C]
General reaction: Group transfer (intramolecular phosphate group isomerization [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA