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The map label for this gene is afsQ1 [H]

Identifier: 94985173

GI number: 94985173

Start: 1140759

End: 1141145

Strand: Reverse

Name: afsQ1 [H]

Synonym: Dgeo_1069

Alternate gene names: 94985173

Gene position: 1141145-1140759 (Counterclockwise)

Preceding gene: 94985174

Following gene: 94985172

Centisome position: 46.25

GC content: 66.67

Gene sequence:

>387_bases
ATGGCGGCTATGGCGTATACCATCCTCGTCGCGGACGACGAACCGGCCATCCGGACCATGCTGGAGGTCATTCTGTCGGC
GGACGGGCACGAAATCGTCACGGTGCCGGACGGCAAGGCGGCACTGGACTACCTGCGCGACCACACCCCGGATGCGCTGC
TGCTGGACGTGCAAATGCCGCAGATGGACGGCTTTGAGATCTGCTCGCGGGTCAAGCGCGTCAAGCGGCTGAGTGGGACG
GCGGTGCTGCTTCTCACGGGCCGCGACGATGACCAGACCCGCGATCAGGCCCGGCTTGTGGGGGCGGACGACCTGATCTA
CAAGCCGCTGAGCGGCAAGAACCTGCGCGGGCGCATCAACCAGCTGATCGAGGCGCGGCGCCGGTGA

Upstream 100 bases:

>100_bases
GTCCACGTCACCGCTGTGGCACTCTCATGCAGACCACACCCAAGCTTCTCATTGTCCTGCCAGCGGGTTGGAGACCGCTC
CAGGCAGAGGCTGCATTATC

Downstream 100 bases:

>100_bases
AGCCGGAGCAAGGCCGCACCACAAAGGAGAACACCGCTTGTTTCTGAGGTTTCTGAAATTCACCACGTCGCTGCTGCTGG
CGGGGGGCGTGGCCGCCGCT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAAMAYTILVADDEPAIRTMLEVILSADGHEIVTVPDGKAALDYLRDHTPDALLLDVQMPQMDGFEICSRVKRVKRLSGT
AVLLLTGRDDDQTRDQARLVGADDLIYKPLSGKNLRGRINQLIEARRR

Sequences:

>Translated_128_residues
MAAMAYTILVADDEPAIRTMLEVILSADGHEIVTVPDGKAALDYLRDHTPDALLLDVQMPQMDGFEICSRVKRVKRLSGT
AVLLLTGRDDDQTRDQARLVGADDLIYKPLSGKNLRGRINQLIEARRR
>Mature_127_residues
AAMAYTILVADDEPAIRTMLEVILSADGHEIVTVPDGKAALDYLRDHTPDALLLDVQMPQMDGFEICSRVKRVKRLSGTA
VLLLTGRDDDQTRDQARLVGADDLIYKPLSGKNLRGRINQLIEARRR

Specific function: Forms part of a two-component regulatory system AfsQ1/AfsQ2 involved in secondary metabolism [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=35, Blast_Score=73, Evalue=5e-15,
Organism=Escherichia coli, GI1790860, Length=117, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=29.3103448275862, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1788550, Length=103, Percent_Identity=33.0097087378641, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 14244; Mature: 14112

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMAYTILVADDEPAIRTMLEVILSADGHEIVTVPDGKAALDYLRDHTPDALLLDVQMP
CCCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECC
QMDGFEICSRVKRVKRLSGTAVLLLTGRDDDQTRDQARLVGADDLIYKPLSGKNLRGRIN
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCHHEECCCCCCCHHHHHH
QLIEARRR
HHHHHHCC
>Mature Secondary Structure 
AAMAYTILVADDEPAIRTMLEVILSADGHEIVTVPDGKAALDYLRDHTPDALLLDVQMP
CCEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECC
QMDGFEICSRVKRVKRLSGTAVLLLTGRDDDQTRDQARLVGADDLIYKPLSGKNLRGRIN
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCHHEECCCCCCCHHHHHH
QLIEARRR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339426; 12000953 [H]