Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985169

Identifier: 94985169

GI number: 94985169

Start: 1135758

End: 1137017

Strand: Reverse

Name: 94985169

Synonym: Dgeo_1065

Alternate gene names: NA

Gene position: 1137017-1135758 (Counterclockwise)

Preceding gene: 94985171

Following gene: 94985167

Centisome position: 46.09

GC content: 67.14

Gene sequence:

>1260_bases
GTGGCTGCCGATAATGCACAGGTGACTGCCGTTCGCAAGCTGCGCCTCAACTGGAACCGCAACGAACGCCTGGGGATTCT
GAACGGGTGGTTGGTGTTCTTGGGAGACGGATTTCTGAGCGTTTCGGTGGTGGTGGCGGGCTTCGCAGCTCGGCTGGGGG
CACCGAACGCCGTGATCGGACTGCTGCCTGCCATCGCTCAGGGGGGATGGATGCTGCCGCAGCTGCTGGTGGCGGCACGC
GTGCGCGCGCTGCCCTACAAGTTGCCGGTGTACCGCTCAGCCGCGCTGGTCAGGATGCTGACCTACCTGGCGATGGTCGT
GATCACGGCGACGCTGGCCGGCTCTCCCGCACTCTGCCTCACCCTATTCGTGCTGGCGATGCTGCTGAATGCCCTCGCGT
CGGGAATCTCGGGCTTGCCCTTCTTGGAGGTGGTGAGCAAGATCGTGCCGCCCAAGCGGCGGGCTTGGTTCTTCGCCACC
CGCAACCTCTACGGCGGCCTGCTGGCTTTTGGGGCTGGACTGGCCGTGCGCTGGATCCTGGCTTCGGGCCTGAGCTTCCC
GCTGAACTACGCGCTGATCTTCCTGCTGGGAACGGTGGCCTATACGGTGGGCTACGGCATCTTCGGGCGGGTGACCGAAC
CCGCTGACCCACCCCTTCCGCCCGCGAGGTTACGCGAGGAGATCCGGGCCATTCCAGAAACGCTGACCGACCGGCATTTT
CGGGCCTTCCTGACCGTGCGGCTGCTGCTCGCCGCGGCGAGCATGGGTGACCCCTTCTATGCGGTCTATGCCCTGCGCGA
CCTGCAGTACCCGGCCGCCACGCTGGGCGCCTTTGTGATGGCGCTTACCGGTGCGGCGCCCCTCTCGAACATCGTGTGGC
AGCGCGTGGCCGAACGCAAGGGATCGCGGCGCATCATCCGCTACGCGTCCTTTTTCGCAGGCCTCGCGCCGCTGCTGGCC
CTGGCGGTTGGCGCGCTGCACCTGCCCGCCGGCGTGTACCTGCTGGTGTTTATCCTCTCCAGTGTGGCCTTGCAAGGCTT
CAACCTGGGCCACACCAACCACCTGCTCAATCTCGCGCCCCCGGAAGCCCGCAGCCGCTACATCGGCACGCTCAACACGC
TGGTCGGCGCCGCGCTGTTCGCCCCGGTTTTCGGCGGGCTGCTGGCCGACGCCGCCGGGTACCGGGCGGTGTTTGTCCTC
AGCGCCGTGCTGTTTGCCGCCGCCTGGTGGCAGTGCGGAAAGCTGCGGCGAGACGCCTAG

Upstream 100 bases:

>100_bases
AGGCGCTGCCCGCTGGTAGGGGCCGAGGTCGAATCGGATCGGGTCATGCGTGGCGGGGATTGTAACACGGCCCGTCTCTC
CATCCCGAACAAGGCACAGA

Downstream 100 bases:

>100_bases
GCGGGCGTGGCCCCTCAGTGGCCAAGGATCTTGCTGAGGAAGGCCTGAGCGCGTTCGTGCTGGGGACGCGTGTAAAAGGC
TTCGGGCGTCGTGTCCTCTA

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Permease

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAAR
VRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFAT
RNLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF
RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLA
LAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVL
SAVLFAAAWWQCGKLRRDA

Sequences:

>Translated_419_residues
MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAAR
VRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFAT
RNLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF
RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLA
LAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVL
SAVLFAAAWWQCGKLRRDA
>Mature_418_residues
AADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAARV
RALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATR
NLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHFR
AFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLAL
AVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLS
AVLFAAAWWQCGKLRRDA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44925; Mature: 44794

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIG
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
LLPAIAQGGWMLPQLLVAARVRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATRNLYGGLLAFGAGLAVRWIL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHH
ASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GSRRIIRYASFFAGLAPLLALAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLSAVLFAAAWWQCGKLRRDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIG
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
LLPAIAQGGWMLPQLLVAARVRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATRNLYGGLLAFGAGLAVRWIL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHH
ASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GSRRIIRYASFFAGLAPLLALAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLSAVLFAAAWWQCGKLRRDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA