| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94985169
Identifier: 94985169
GI number: 94985169
Start: 1135758
End: 1137017
Strand: Reverse
Name: 94985169
Synonym: Dgeo_1065
Alternate gene names: NA
Gene position: 1137017-1135758 (Counterclockwise)
Preceding gene: 94985171
Following gene: 94985167
Centisome position: 46.09
GC content: 67.14
Gene sequence:
>1260_bases GTGGCTGCCGATAATGCACAGGTGACTGCCGTTCGCAAGCTGCGCCTCAACTGGAACCGCAACGAACGCCTGGGGATTCT GAACGGGTGGTTGGTGTTCTTGGGAGACGGATTTCTGAGCGTTTCGGTGGTGGTGGCGGGCTTCGCAGCTCGGCTGGGGG CACCGAACGCCGTGATCGGACTGCTGCCTGCCATCGCTCAGGGGGGATGGATGCTGCCGCAGCTGCTGGTGGCGGCACGC GTGCGCGCGCTGCCCTACAAGTTGCCGGTGTACCGCTCAGCCGCGCTGGTCAGGATGCTGACCTACCTGGCGATGGTCGT GATCACGGCGACGCTGGCCGGCTCTCCCGCACTCTGCCTCACCCTATTCGTGCTGGCGATGCTGCTGAATGCCCTCGCGT CGGGAATCTCGGGCTTGCCCTTCTTGGAGGTGGTGAGCAAGATCGTGCCGCCCAAGCGGCGGGCTTGGTTCTTCGCCACC CGCAACCTCTACGGCGGCCTGCTGGCTTTTGGGGCTGGACTGGCCGTGCGCTGGATCCTGGCTTCGGGCCTGAGCTTCCC GCTGAACTACGCGCTGATCTTCCTGCTGGGAACGGTGGCCTATACGGTGGGCTACGGCATCTTCGGGCGGGTGACCGAAC CCGCTGACCCACCCCTTCCGCCCGCGAGGTTACGCGAGGAGATCCGGGCCATTCCAGAAACGCTGACCGACCGGCATTTT CGGGCCTTCCTGACCGTGCGGCTGCTGCTCGCCGCGGCGAGCATGGGTGACCCCTTCTATGCGGTCTATGCCCTGCGCGA CCTGCAGTACCCGGCCGCCACGCTGGGCGCCTTTGTGATGGCGCTTACCGGTGCGGCGCCCCTCTCGAACATCGTGTGGC AGCGCGTGGCCGAACGCAAGGGATCGCGGCGCATCATCCGCTACGCGTCCTTTTTCGCAGGCCTCGCGCCGCTGCTGGCC CTGGCGGTTGGCGCGCTGCACCTGCCCGCCGGCGTGTACCTGCTGGTGTTTATCCTCTCCAGTGTGGCCTTGCAAGGCTT CAACCTGGGCCACACCAACCACCTGCTCAATCTCGCGCCCCCGGAAGCCCGCAGCCGCTACATCGGCACGCTCAACACGC TGGTCGGCGCCGCGCTGTTCGCCCCGGTTTTCGGCGGGCTGCTGGCCGACGCCGCCGGGTACCGGGCGGTGTTTGTCCTC AGCGCCGTGCTGTTTGCCGCCGCCTGGTGGCAGTGCGGAAAGCTGCGGCGAGACGCCTAG
Upstream 100 bases:
>100_bases AGGCGCTGCCCGCTGGTAGGGGCCGAGGTCGAATCGGATCGGGTCATGCGTGGCGGGGATTGTAACACGGCCCGTCTCTC CATCCCGAACAAGGCACAGA
Downstream 100 bases:
>100_bases GCGGGCGTGGCCCCTCAGTGGCCAAGGATCTTGCTGAGGAAGGCCTGAGCGCGTTCGTGCTGGGGACGCGTGTAAAAGGC TTCGGGCGTCGTGTCCTCTA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Permease
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAAR VRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFAT RNLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLA LAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVL SAVLFAAAWWQCGKLRRDA
Sequences:
>Translated_419_residues MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAAR VRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFAT RNLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLA LAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVL SAVLFAAAWWQCGKLRRDA >Mature_418_residues AADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIGLLPAIAQGGWMLPQLLVAARV RALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCLTLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATR NLYGGLLAFGAGLAVRWILASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHFR AFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERKGSRRIIRYASFFAGLAPLLAL AVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAPPEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLS AVLFAAAWWQCGKLRRDA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44925; Mature: 44794
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIG CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH LLPAIAQGGWMLPQLLVAARVRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATRNLYGGLLAFGAGLAVRWIL HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHH ASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GSRRIIRYASFFAGLAPLLALAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLSAVLFAAAWWQCGKLRRDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AADNAQVTAVRKLRLNWNRNERLGILNGWLVFLGDGFLSVSVVVAGFAARLGAPNAVIG CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH LLPAIAQGGWMLPQLLVAARVRALPYKLPVYRSAALVRMLTYLAMVVITATLAGSPALCL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TLFVLAMLLNALASGISGLPFLEVVSKIVPPKRRAWFFATRNLYGGLLAFGAGLAVRWIL HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHH ASGLSFPLNYALIFLLGTVAYTVGYGIFGRVTEPADPPLPPARLREEIRAIPETLTDRHF HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RAFLTVRLLLAAASMGDPFYAVYALRDLQYPAATLGAFVMALTGAAPLSNIVWQRVAERK HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GSRRIIRYASFFAGLAPLLALAVGALHLPAGVYLLVFILSSVALQGFNLGHTNHLLNLAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PEARSRYIGTLNTLVGAALFAPVFGGLLADAAGYRAVFVLSAVLFAAAWWQCGKLRRDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA