| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985070
Identifier: 94985070
GI number: 94985070
Start: 1032364
End: 1033572
Strand: Reverse
Name: 94985070
Synonym: Dgeo_0965
Alternate gene names: NA
Gene position: 1033572-1032364 (Counterclockwise)
Preceding gene: 94985072
Following gene: 94985069
Centisome position: 41.89
GC content: 70.22
Gene sequence:
>1209_bases ATGCCCAGAACCCCACCCCCCCTCCCCACCGACCTGCCCGACCTCTCTCCTCCCGAACAGCTCACCGTCCAGTTGCGGAC CATCACTCCCATGTTCGGTGGGAGTGCCGAGACCCGCGAGGTGGACGAGCGTCACCCCGTGCGTGCGGCCAGCGTGCGCG GCCACCTGCGGTTTTGGTGGCGGGCCACCGCTGGGGCCGGGTACGCCACAGCAAAGGAGCTGCACAAAGCCGAGTCGGGG CTGTGGGGCAACACCGAGAAGCCGGGGCGGGTGCGGGTGGAGGTGGAGGTGACGGAGCGGGGCACGCGCGTTTACCCCTC CGAACTGAACAAGGGGGGCGACAGCCCCGCCAAGACCGGGCCTCGCGAAGCGTACTTCGTGCATCCTTTTCAGGAGATTC GCTCCGAAAACAAGCCGGAAACCTTCGGCCTCAGGGACGTCGCCTTCACCGTAACCCTCACCCTGCATAGGCTGAGCGCC GCCGAGCGTGAGCAGGTCATCACGGCGCTGCGGGCCTGGATTGCCTTTGGGGGCGTGGGTGCCCGCACCCGCCGGGGTTG CGGTGCCCTCACCGTCGCCGGGGACGCGGCTCAGTGGCTGCCCGCCCAGCCCGCCGACTTGTGGGCGTGGTTTGGCCGCG AGGAACGCGCGGTGCCCACGCCGCAACACAGTGTTCTGGCTGGAGCCAAAGCGCTGCTCGGCCCGGTGGGTGCCGACCCG GTGAAGGGGGTATGGCGCGACCTAGGCCGCTTCTGGGCACGGTTTCGCAAGGGGCACTACACCGAGCGCCGCCCTGCTTA CAGCCCCATGAGCGGCGGCGCGTGGCGCGACCACCGCACCCTTCAGGCGGGGCTGCGGCGCGACGAACCCGCTCGGCTCG CCAAGCCCTTTCTCGGCCTGCCCATCGTGTACCAGAAGTTTCCCAAGACGGACGCCTTCGCGGGCACCATCGAGGGCGCG CAGGAGGGCAAAAAGCGCATGGCGTCCCCGGTCATCCTCAAGCCCTGCGCCTTTCGCGACGGGGTGCGGGGGCTGGTGCT CGTCCTGAACGCGCCCCCCCCGCGCCAGGTCAAGGTGTCGGGACAGCCGCATCCCCTGGAGATTCCGCCCCATGACCCCG TGCTGGCAGCGCTGGGGGTGCGCGGCCCGCTGGCTGCCGTTCGCGCCGCTGCCAAGGTGGACGGCTACTCCGAGGAGGTC TCCCTGTGA
Upstream 100 bases:
>100_bases GCATCTTTTGGCAACGGCGCCTCCCTGCCTTTGGCTCCTTCCGTCTTCAGGAATGCCATAAGGCGAGACCGGAAGCCGGC GTGCCTCCACGGAGAACTTG
Downstream 100 bases:
>100_bases CCCGCCATCTCCTTTCTCTCTCCCTCGGCCCGGTGCAGGAGTTCATCGCCGCGGCCCGCAAAACCGCCGACCTGGAAGCT GGGTCCACCCTGCTGGTCGA
Product: CRISPR-associated Cmr1 family protein
Products: NA
Alternate protein names: CRISPR-Associated RAMP Cmr1 Family Protein; CRISPR-Associated Cmr1 Family Protein; Cmr1 Family CRISPR-Associated RAMP Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPRTPPPLPTDLPDLSPPEQLTVQLRTITPMFGGSAETREVDERHPVRAASVRGHLRFWWRATAGAGYATAKELHKAESG LWGNTEKPGRVRVEVEVTERGTRVYPSELNKGGDSPAKTGPREAYFVHPFQEIRSENKPETFGLRDVAFTVTLTLHRLSA AEREQVITALRAWIAFGGVGARTRRGCGALTVAGDAAQWLPAQPADLWAWFGREERAVPTPQHSVLAGAKALLGPVGADP VKGVWRDLGRFWARFRKGHYTERRPAYSPMSGGAWRDHRTLQAGLRRDEPARLAKPFLGLPIVYQKFPKTDAFAGTIEGA QEGKKRMASPVILKPCAFRDGVRGLVLVLNAPPPRQVKVSGQPHPLEIPPHDPVLAALGVRGPLAAVRAAAKVDGYSEEV SL
Sequences:
>Translated_402_residues MPRTPPPLPTDLPDLSPPEQLTVQLRTITPMFGGSAETREVDERHPVRAASVRGHLRFWWRATAGAGYATAKELHKAESG LWGNTEKPGRVRVEVEVTERGTRVYPSELNKGGDSPAKTGPREAYFVHPFQEIRSENKPETFGLRDVAFTVTLTLHRLSA AEREQVITALRAWIAFGGVGARTRRGCGALTVAGDAAQWLPAQPADLWAWFGREERAVPTPQHSVLAGAKALLGPVGADP VKGVWRDLGRFWARFRKGHYTERRPAYSPMSGGAWRDHRTLQAGLRRDEPARLAKPFLGLPIVYQKFPKTDAFAGTIEGA QEGKKRMASPVILKPCAFRDGVRGLVLVLNAPPPRQVKVSGQPHPLEIPPHDPVLAALGVRGPLAAVRAAAKVDGYSEEV SL >Mature_401_residues PRTPPPLPTDLPDLSPPEQLTVQLRTITPMFGGSAETREVDERHPVRAASVRGHLRFWWRATAGAGYATAKELHKAESGL WGNTEKPGRVRVEVEVTERGTRVYPSELNKGGDSPAKTGPREAYFVHPFQEIRSENKPETFGLRDVAFTVTLTLHRLSAA EREQVITALRAWIAFGGVGARTRRGCGALTVAGDAAQWLPAQPADLWAWFGREERAVPTPQHSVLAGAKALLGPVGADPV KGVWRDLGRFWARFRKGHYTERRPAYSPMSGGAWRDHRTLQAGLRRDEPARLAKPFLGLPIVYQKFPKTDAFAGTIEGAQ EGKKRMASPVILKPCAFRDGVRGLVLVLNAPPPRQVKVSGQPHPLEIPPHDPVLAALGVRGPLAAVRAAAKVDGYSEEVS L
Specific function: Unknown
COG id: COG1367
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43956; Mature: 43825
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTPPPLPTDLPDLSPPEQLTVQLRTITPMFGGSAETREVDERHPVRAASVRGHLRFWW CCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHCCCEEEEE RATAGAGYATAKELHKAESGLWGNTEKPGRVRVEVEVTERGTRVYPSELNKGGDSPAKTG EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCCCCC PREAYFVHPFQEIRSENKPETFGLRDVAFTVTLTLHRLSAAEREQVITALRAWIAFGGVG CCCEEEECCHHHHCCCCCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARTRRGCGALTVAGDAAQWLPAQPADLWAWFGREERAVPTPQHSVLAGAKALLGPVGADP CCCCCCCCEEEECCCCHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH VKGVWRDLGRFWARFRKGHYTERRPAYSPMSGGAWRDHRTLQAGLRRDEPARLAKPFLGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC PIVYQKFPKTDAFAGTIEGAQEGKKRMASPVILKPCAFRDGVRGLVLVLNAPPPRQVKVS CHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCEEEEC GQPHPLEIPPHDPVLAALGVRGPLAAVRAAAKVDGYSEEVSL CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure PRTPPPLPTDLPDLSPPEQLTVQLRTITPMFGGSAETREVDERHPVRAASVRGHLRFWW CCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHCCCHHHHHCCCEEEEE RATAGAGYATAKELHKAESGLWGNTEKPGRVRVEVEVTERGTRVYPSELNKGGDSPAKTG EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEECHHHHCCCCCCCCCCC PREAYFVHPFQEIRSENKPETFGLRDVAFTVTLTLHRLSAAEREQVITALRAWIAFGGVG CCCEEEECCHHHHCCCCCCCCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARTRRGCGALTVAGDAAQWLPAQPADLWAWFGREERAVPTPQHSVLAGAKALLGPVGADP CCCCCCCCEEEECCCCHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH VKGVWRDLGRFWARFRKGHYTERRPAYSPMSGGAWRDHRTLQAGLRRDEPARLAKPFLGL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCC PIVYQKFPKTDAFAGTIEGAQEGKKRMASPVILKPCAFRDGVRGLVLVLNAPPPRQVKVS CHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCEEEEC GQPHPLEIPPHDPVLAALGVRGPLAAVRAAAKVDGYSEEVSL CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA