| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is feoB [H]
Identifier: 94985001
GI number: 94985001
Start: 952990
End: 955215
Strand: Reverse
Name: feoB [H]
Synonym: Dgeo_0894
Alternate gene names: 94985001
Gene position: 955215-952990 (Counterclockwise)
Preceding gene: 94985002
Following gene: 94985000
Centisome position: 38.72
GC content: 69.81
Gene sequence:
>2226_bases GTGACCGTGCAGTCACCCCCGCCCGGCCTGCTGGTGCCCGACGAGGCCGCCTGCGCGGCGACGGTGGAGCAGCTGCGGGC CGCCTGCGAACCGCGCGTGGTGGTTGTCGGCAATCCCAACGTAGGCAAGACGACCCTGATCAACGCCGTGGCCGGCACCC GGCTCAAGGTCGGCAACTGGTCGGGCGTGACCATCGAAAAACGCGAAGCGCGGCTGACGCACGCAGGCCGCTCGGTCTAC CTGCTCGACCTTCCCGGCGCGTACTCGCTCAGCCCCCATACCCCTGAAGAACTGATCACCCGCACGGCCCTGCTGGACGA GGCGCCCGACGCGGTGATCAACGTGCTCGACGCCGGAAACCTGGAACGCAACCTCTATCTGACGCTGCAACTGCTCGACT TCCGGGTGCCGGTGGCCGTCGCCCTCAATCTGGTGGATGAGGCGCGCGACAAGGGGTTGACGGTAGACCCCGCGGCGCTC GCGCGGGCGCTGGGCGTGCCAGTGGTGGAGACCGTGGCGAGCCGAAGCGAGGGCACCGGAGCACTGCTCGAACAGACGCT CTCGCGGGCCACGCTCGGCATCGGCGTGCGCTATCCCGAAGCCATCGAGGCCGCCGTGAGCGATCTGACGGCGCGGATGG CGGAGCTGCCTACCCTGCCGCCCCACGCGCACCGCTACCTTGCGCTCGCCTTGCTGGAAGGCGATCCCAGCGTGCGCGGG CGGCTCGCTGCGACTGGCCATACCCCGCTGCTCGACGCAGCCGACGCGCACCTGGCGGCGCTGGAGGTGGGAGGCGTCGA TGCGCTGATCGAGATCGCGGAGGCACGTTATGCCCGGGCGGGCGACCTGGCACGGCTGGCGGTCCCACAGGCAGAAGCGC GGCGCACGCTCAGCGAGCGGTTAGACCGCCTGGCGCTGCACCCGCTATTGGGCATTCCGCTGTTCCTGGCGCTGGTGCTG CTGGTGTTTCGCCTCACCTTCAATGTGGCCTCACCCTTCGTGGACCTGATCGGCGGGCCGCTGCAGGACACCGTGAGCGG GTGGGCGTCAGCGGCCCTGGGCTGGTTCCCGCTCGCCCGCGATCTGGTGGTGGGGGCGATCATCCCCGGCGTGGGGACGG TGCTGAGCTTCTTGCCTACGCTGCTGGTGCTGTACCTCGCCATGAGCTTTTTGGAAGACAGCGGCTACATGGCCCGCGCC GCCTTCCTGATGGACCGGGCCATGCGCACCGTCGGGCTGGACGGGCGGGCCTTTATCCCGCTGATCCTGGGCTTCGGCTG CAACGTGCCCGCCGTCTACGCCACGCGCACATTAGAACGGCGCAGTGACCGCGTGCTCGTCAGCATGATCTTGCCCTTCA TGAGCTGCTCGGCCCGGCTGCCGGTGTATGTGGTGTTTGCCGCCGCCCTGTTCCCACGGTACGGGAGCTGGGTGGTCTGG GCACTGTATGTGCTGGGCATGGTGGTCGCCTTCGCCTTTGCACTGCTGCTGCGCCGGACCTCCCTGCCCGCCGAGGGGGA CGGCGTGTTGCTGGAGCTGCCGCCCTACCGCTTCCCCGCCTGGAAGGTGCTGTGGAAGCACGCCTGGCGCCGCACCGCGA GCTTTGCCAAACGGGCGCGGACGACCGTGCTCGCGACGGTCGCGGTGGTGTGGCTGCTGCTGGCGCTTCCGGCAGTCGCG GGCGGTCAGTTTGCCACTGTTCCCCCGCAAGACAGCCTCTTTGGGCGGGTCAGCCAGGCTGCGTCCCCGGTTTTCGCGCC GCTGGGCTTCGGGAACTGGCAGGCGACCGGGGCGCTGGTGCCGGGCTTCATCGCCAAGGAGGTTGTGGTCGGCACGCTGG GGCAGATCTACCTGGGCGAACAGGCCGCCCGGCCTGCGCCGCTGGGCCTGCTGGCTGGGGCCCACCAGGCCCTGACCGCC ACCTGGGACGCCCTCAAGGCGAGCGTATCGGCCATCCCGACCGTGCTGGCGCTGCCCCATCTGGGCGCGGACACCAGCGC CGAGGCCAAGACGCCGCTGGCCGCCGCGCTGGCACGGGCCTTTACCCCGGCGAGTGCCCTGGCCTATCTGGTGTTCGTGC TGCTGTATACACCGTGCATCGCCACGGTCGGCGCGCTCGCACAGGAACACGGGCGCCGAGTGGCCTGGACGACGGTTGCG TACCAACTCACCACCGCTTGGGTCGCAGGCTTCCTGGTGTACCAGCTTGCGGTGAGGCTGCTGTGA
Upstream 100 bases:
>100_bases TGGTTCGCCGCGCTCCACTGGGTGATCCAGTGGAAGTGCGCGTCAACGGAACCGAATTGGCACTGCGGGTTGCCGACCTG CGGGGCATTCGGGTGCGGGC
Downstream 100 bases:
>100_bases TGGAGGAGCTGTGACCGCGCCGCTGGCCACCATCCTGCAGGCTGTGGCCGGTGAGCCGCGCACTCCCGCCGAACTCGCCC GCACGCTGGGCAGCAGCGAG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MTVQSPPPGLLVPDEAACAATVEQLRAACEPRVVVVGNPNVGKTTLINAVAGTRLKVGNWSGVTIEKREARLTHAGRSVY LLDLPGAYSLSPHTPEELITRTALLDEAPDAVINVLDAGNLERNLYLTLQLLDFRVPVAVALNLVDEARDKGLTVDPAAL ARALGVPVVETVASRSEGTGALLEQTLSRATLGIGVRYPEAIEAAVSDLTARMAELPTLPPHAHRYLALALLEGDPSVRG RLAATGHTPLLDAADAHLAALEVGGVDALIEIAEARYARAGDLARLAVPQAEARRTLSERLDRLALHPLLGIPLFLALVL LVFRLTFNVASPFVDLIGGPLQDTVSGWASAALGWFPLARDLVVGAIIPGVGTVLSFLPTLLVLYLAMSFLEDSGYMARA AFLMDRAMRTVGLDGRAFIPLILGFGCNVPAVYATRTLERRSDRVLVSMILPFMSCSARLPVYVVFAAALFPRYGSWVVW ALYVLGMVVAFAFALLLRRTSLPAEGDGVLLELPPYRFPAWKVLWKHAWRRTASFAKRARTTVLATVAVVWLLLALPAVA GGQFATVPPQDSLFGRVSQAASPVFAPLGFGNWQATGALVPGFIAKEVVVGTLGQIYLGEQAARPAPLGLLAGAHQALTA TWDALKASVSAIPTVLALPHLGADTSAEAKTPLAAALARAFTPASALAYLVFVLLYTPCIATVGALAQEHGRRVAWTTVA YQLTTAWVAGFLVYQLAVRLL
Sequences:
>Translated_741_residues MTVQSPPPGLLVPDEAACAATVEQLRAACEPRVVVVGNPNVGKTTLINAVAGTRLKVGNWSGVTIEKREARLTHAGRSVY LLDLPGAYSLSPHTPEELITRTALLDEAPDAVINVLDAGNLERNLYLTLQLLDFRVPVAVALNLVDEARDKGLTVDPAAL ARALGVPVVETVASRSEGTGALLEQTLSRATLGIGVRYPEAIEAAVSDLTARMAELPTLPPHAHRYLALALLEGDPSVRG RLAATGHTPLLDAADAHLAALEVGGVDALIEIAEARYARAGDLARLAVPQAEARRTLSERLDRLALHPLLGIPLFLALVL LVFRLTFNVASPFVDLIGGPLQDTVSGWASAALGWFPLARDLVVGAIIPGVGTVLSFLPTLLVLYLAMSFLEDSGYMARA AFLMDRAMRTVGLDGRAFIPLILGFGCNVPAVYATRTLERRSDRVLVSMILPFMSCSARLPVYVVFAAALFPRYGSWVVW ALYVLGMVVAFAFALLLRRTSLPAEGDGVLLELPPYRFPAWKVLWKHAWRRTASFAKRARTTVLATVAVVWLLLALPAVA GGQFATVPPQDSLFGRVSQAASPVFAPLGFGNWQATGALVPGFIAKEVVVGTLGQIYLGEQAARPAPLGLLAGAHQALTA TWDALKASVSAIPTVLALPHLGADTSAEAKTPLAAALARAFTPASALAYLVFVLLYTPCIATVGALAQEHGRRVAWTTVA YQLTTAWVAGFLVYQLAVRLL >Mature_740_residues TVQSPPPGLLVPDEAACAATVEQLRAACEPRVVVVGNPNVGKTTLINAVAGTRLKVGNWSGVTIEKREARLTHAGRSVYL LDLPGAYSLSPHTPEELITRTALLDEAPDAVINVLDAGNLERNLYLTLQLLDFRVPVAVALNLVDEARDKGLTVDPAALA RALGVPVVETVASRSEGTGALLEQTLSRATLGIGVRYPEAIEAAVSDLTARMAELPTLPPHAHRYLALALLEGDPSVRGR LAATGHTPLLDAADAHLAALEVGGVDALIEIAEARYARAGDLARLAVPQAEARRTLSERLDRLALHPLLGIPLFLALVLL VFRLTFNVASPFVDLIGGPLQDTVSGWASAALGWFPLARDLVVGAIIPGVGTVLSFLPTLLVLYLAMSFLEDSGYMARAA FLMDRAMRTVGLDGRAFIPLILGFGCNVPAVYATRTLERRSDRVLVSMILPFMSCSARLPVYVVFAAALFPRYGSWVVWA LYVLGMVVAFAFALLLRRTSLPAEGDGVLLELPPYRFPAWKVLWKHAWRRTASFAKRARTTVLATVAVVWLLLALPAVAG GQFATVPPQDSLFGRVSQAASPVFAPLGFGNWQATGALVPGFIAKEVVVGTLGQIYLGEQAARPAPLGLLAGAHQALTAT WDALKASVSAIPTVLALPHLGADTSAEAKTPLAAALARAFTPASALAYLVFVLLYTPCIATVGALAQEHGRRVAWTTVAY QLTTAWVAGFLVYQLAVRLL
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=723, Percent_Identity=37.344398340249, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 78702; Mature: 78571
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQSPPPGLLVPDEAACAATVEQLRAACEPRVVVVGNPNVGKTTLINAVAGTRLKVGNW CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEECCC SGVTIEKREARLTHAGRSVYLLDLPGAYSLSPHTPEELITRTALLDEAPDAVINVLDAGN CCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC LERNLYLTLQLLDFRVPVAVALNLVDEARDKGLTVDPAALARALGVPVVETVASRSEGTG CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCCH ALLEQTLSRATLGIGVRYPEAIEAAVSDLTARMAELPTLPPHAHRYLALALLEGDPSVRG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCC RLAATGHTPLLDAADAHLAALEVGGVDALIEIAEARYARAGDLARLAVPQAEARRTLSER EEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH LDRLALHPLLGIPLFLALVLLVFRLTFNVASPFVDLIGGPLQDTVSGWASAALGWFPLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLVVGAIIPGVGTVLSFLPTLLVLYLAMSFLEDSGYMARAAFLMDRAMRTVGLDGRAFIP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH LILGFGCNVPAVYATRTLERRSDRVLVSMILPFMSCSARLPVYVVFAAALFPRYGSWVVW HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH ALYVLGMVVAFAFALLLRRTSLPAEGDGVLLELPPYRFPAWKVLWKHAWRRTASFAKRAR HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH TTVLATVAVVWLLLALPAVAGGQFATVPPQDSLFGRVSQAASPVFAPLGFGNWQATGALV HHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCC PGFIAKEVVVGTLGQIYLGEQAARPAPLGLLAGAHQALTATWDALKASVSAIPTVLALPH CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC LGADTSAEAKTPLAAALARAFTPASALAYLVFVLLYTPCIATVGALAQEHGRRVAWTTVA CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHH YQLTTAWVAGFLVYQLAVRLL HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVQSPPPGLLVPDEAACAATVEQLRAACEPRVVVVGNPNVGKTTLINAVAGTRLKVGNW CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEECCC SGVTIEKREARLTHAGRSVYLLDLPGAYSLSPHTPEELITRTALLDEAPDAVINVLDAGN CCCEEEHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC LERNLYLTLQLLDFRVPVAVALNLVDEARDKGLTVDPAALARALGVPVVETVASRSEGTG CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCCCH ALLEQTLSRATLGIGVRYPEAIEAAVSDLTARMAELPTLPPHAHRYLALALLEGDPSVRG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCCCC RLAATGHTPLLDAADAHLAALEVGGVDALIEIAEARYARAGDLARLAVPQAEARRTLSER EEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH LDRLALHPLLGIPLFLALVLLVFRLTFNVASPFVDLIGGPLQDTVSGWASAALGWFPLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DLVVGAIIPGVGTVLSFLPTLLVLYLAMSFLEDSGYMARAAFLMDRAMRTVGLDGRAFIP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH LILGFGCNVPAVYATRTLERRSDRVLVSMILPFMSCSARLPVYVVFAAALFPRYGSWVVW HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH ALYVLGMVVAFAFALLLRRTSLPAEGDGVLLELPPYRFPAWKVLWKHAWRRTASFAKRAR HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH TTVLATVAVVWLLLALPAVAGGQFATVPPQDSLFGRVSQAASPVFAPLGFGNWQATGALV HHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCC PGFIAKEVVVGTLGQIYLGEQAARPAPLGLLAGAHQALTATWDALKASVSAIPTVLALPH CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC LGADTSAEAKTPLAAALARAFTPASALAYLVFVLLYTPCIATVGALAQEHGRRVAWTTVA CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHH YQLTTAWVAGFLVYQLAVRLL HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA