| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984998
Identifier: 94984998
GI number: 94984998
Start: 950804
End: 951313
Strand: Reverse
Name: 94984998
Synonym: Dgeo_0891
Alternate gene names: NA
Gene position: 951313-950804 (Counterclockwise)
Preceding gene: 94984999
Following gene: 94984996
Centisome position: 38.56
GC content: 59.22
Gene sequence:
>510_bases ATGACACAACATCGCGAGCAACCAACCCGTGAGGAAGCCATCAAGACCCTCGCTGGTCTCATCCAGGGCATCAAGTTTGC GATGCTGACCGTCACCACCGATCAGGGTCACCTCAAAGCGCACCCGATGACGACTCAGCAGACCGAGTTCGACGGCGACC TCTGGTTTCTGGCCGACAAGAGCACCGAGCAGGTGCAGTGCATGCGCGAGCGGCCCGAGGTCAACGTCAGCTATTCGGAC CCCGGCAAGAACAACTACGTGAGTGTGAGTGGGACCGCCGAACTGGTCGAGGACCGTGCCAAGCTGGAAGAACTGTGGAG TGACTTCTACAAAGCCTACTTTCCCGAGGGCATCGACGACCCCAACATCCAGCTCGTTAAGGTCGAGGCTCACGGCGCCG AATATTGGGAAGGCAGCGGGAAGATGAAGGCGCTTTTCCAGATGGCCCGCGCCGCCGTTACCGGTAAGCCCGCGACCGAC ATGGGCAACAACGATACTGTCAAACTCTGA
Upstream 100 bases:
>100_bases GACCTCGTCCGCCCGCGTCCCCTCACACAACCTGACGGGAACCTTTAGACGGTGCCCCCCCTCCCAGAAGGGGCAGCGCG GGCCATGGAATGCTCGCCCC
Downstream 100 bases:
>100_bases GCACGTGGACCGGAGAAGGGACGGGACTTCCGGCACCTGCTCCGGCGCGATCTAGGGACATGAGTCAGACGGGCGAGGCA ACCCCTCGCCTTCTTCTCTG
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; General Stress
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTQHREQPTREEAIKTLAGLIQGIKFAMLTVTTDQGHLKAHPMTTQQTEFDGDLWFLADKSTEQVQCMRERPEVNVSYSD PGKNNYVSVSGTAELVEDRAKLEELWSDFYKAYFPEGIDDPNIQLVKVEAHGAEYWEGSGKMKALFQMARAAVTGKPATD MGNNDTVKL
Sequences:
>Translated_169_residues MTQHREQPTREEAIKTLAGLIQGIKFAMLTVTTDQGHLKAHPMTTQQTEFDGDLWFLADKSTEQVQCMRERPEVNVSYSD PGKNNYVSVSGTAELVEDRAKLEELWSDFYKAYFPEGIDDPNIQLVKVEAHGAEYWEGSGKMKALFQMARAAVTGKPATD MGNNDTVKL >Mature_168_residues TQHREQPTREEAIKTLAGLIQGIKFAMLTVTTDQGHLKAHPMTTQQTEFDGDLWFLADKSTEQVQCMRERPEVNVSYSDP GKNNYVSVSGTAELVEDRAKLEELWSDFYKAYFPEGIDDPNIQLVKVEAHGAEYWEGSGKMKALFQMARAAVTGKPATDM GNNDTVKL
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18959; Mature: 18828
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHREQPTREEAIKTLAGLIQGIKFAMLTVTTDQGHLKAHPMTTQQTEFDGDLWFLADK CCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECC STEQVQCMRERPEVNVSYSDPGKNNYVSVSGTAELVEDRAKLEELWSDFYKAYFPEGIDD CHHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PNIQLVKVEAHGAEYWEGSGKMKALFQMARAAVTGKPATDMGNNDTVKL CCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEC >Mature Secondary Structure TQHREQPTREEAIKTLAGLIQGIKFAMLTVTTDQGHLKAHPMTTQQTEFDGDLWFLADK CCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEECC STEQVQCMRERPEVNVSYSDPGKNNYVSVSGTAELVEDRAKLEELWSDFYKAYFPEGIDD CHHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PNIQLVKVEAHGAEYWEGSGKMKALFQMARAAVTGKPATDMGNNDTVKL CCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA