| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984910
Identifier: 94984910
GI number: 94984910
Start: 859476
End: 860537
Strand: Reverse
Name: 94984910
Synonym: Dgeo_0803
Alternate gene names: NA
Gene position: 860537-859476 (Counterclockwise)
Preceding gene: 94984911
Following gene: 94984909
Centisome position: 34.88
GC content: 68.83
Gene sequence:
>1062_bases GTGACACGGCTCTCCTCGAGAAAGATTCCAACGGCGCGCATCGAAACACACGTCTTAGAACGGCCTGCGCTGGGCGCGGC GACACGGCGGATGCTGCTGGTCCACGGCAACGTGTCGAGCGGGGCCTTTTTTCGCGACCTGCTGGAAGCCCTGCCCGCAG ACATCCACGCCGCCGCGCCGGACCTGCGCGGGTACGGCGGAAGCGAGGCGGCGCCGGTGGACGCAACGCGCGGTCTGCGT GACTGGTCGGATGATCTCGTGGCGCTGCTGGATGCGCTGGGCTGGGCGGATGCCCACCTGCTGGGCTGGAGCCTGGGCGG CGGCGTGGTGATGAATCTGGCGGTGGATCACCCGAAGCGGGTCCGGTCTGTGACGCTGGTCGCGCCGATCAGCCCGTTCG GGTTTGGCGGCACGCGGGAGGCAAACGGCACGCCGAACAGCCCGGACTTCGCGGGGTCAGGGGGCGGCACGGTGAACGCG GGCTTCGTGGCCGCGGTCGCGGCAGGGGACCGCTCGGACGCGCCGGGCAGCCCCCGGGACGTGCTGCGGAAGTTCTACGT CAATCCGCAACGCTTCCAGCCCACCCCCGAGCAGGAGGAAGCCTGGCTGTCCGCCATGCTGACCACACGAACGGGTGACG ACCATTACCCCGGTGACTTCACGCCTAGCCCCCACTGGCCGCACGTCGCGCCGGGAACGCGGGGGGTGGCGAATGCCTTC AGCCCCAGGTACACGAACCTGAGTGCCTTTGCGGACCTGAGACCCCCGCCGCCGGTGTTGTGGGTGCGCGGCGATGCAGA CGTGATTGTGGGGGACAGCAGCCTCTTCGACCTCGCGCAACTCGGGGCACTGGGCGTGGTCCCCGGCTGGCCCGGTCCCG ATAGCTGCCCGCCGCAGCCCATGCTGAAGCAGCTGCGTGCCCTCCTGGAACGCGGCCAGGCAAACGGCGGCAGTTACCGT GAAGTCGTCTTGCCGGATGTAGGTCATGCTCCCTTTCTGGAGGCACCGGAAGCCTTTCTGGCGGCCTTGATCGAACATCT GTCCGAGGAGCGTCAACCCTAG
Upstream 100 bases:
>100_bases CGCATGTGGTGCTCCTGGCTGCCTGCGGCGAGCTGAACGCTTTTCAGGGCCGCGCGGCTTGAAGGTGGGCGGCCCTGTAG CCTCAGAAAGGAGAGGATGG
Downstream 100 bases:
>100_bases ATGGAACTCTTTTGGCAAACCCTGCTCAATGGCCTGCTGCAAAGCGGCCTGTACGCGCTCGTCGCAGCGGGGCTGGCGCT GGCGGTGGGCGTGGTCGGCA
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTRLSSRKIPTARIETHVLERPALGAATRRMLLVHGNVSSGAFFRDLLEALPADIHAAAPDLRGYGGSEAAPVDATRGLR DWSDDLVALLDALGWADAHLLGWSLGGGVVMNLAVDHPKRVRSVTLVAPISPFGFGGTREANGTPNSPDFAGSGGGTVNA GFVAAVAAGDRSDAPGSPRDVLRKFYVNPQRFQPTPEQEEAWLSAMLTTRTGDDHYPGDFTPSPHWPHVAPGTRGVANAF SPRYTNLSAFADLRPPPPVLWVRGDADVIVGDSSLFDLAQLGALGVVPGWPGPDSCPPQPMLKQLRALLERGQANGGSYR EVVLPDVGHAPFLEAPEAFLAALIEHLSEERQP
Sequences:
>Translated_353_residues MTRLSSRKIPTARIETHVLERPALGAATRRMLLVHGNVSSGAFFRDLLEALPADIHAAAPDLRGYGGSEAAPVDATRGLR DWSDDLVALLDALGWADAHLLGWSLGGGVVMNLAVDHPKRVRSVTLVAPISPFGFGGTREANGTPNSPDFAGSGGGTVNA GFVAAVAAGDRSDAPGSPRDVLRKFYVNPQRFQPTPEQEEAWLSAMLTTRTGDDHYPGDFTPSPHWPHVAPGTRGVANAF SPRYTNLSAFADLRPPPPVLWVRGDADVIVGDSSLFDLAQLGALGVVPGWPGPDSCPPQPMLKQLRALLERGQANGGSYR EVVLPDVGHAPFLEAPEAFLAALIEHLSEERQP >Mature_352_residues TRLSSRKIPTARIETHVLERPALGAATRRMLLVHGNVSSGAFFRDLLEALPADIHAAAPDLRGYGGSEAAPVDATRGLRD WSDDLVALLDALGWADAHLLGWSLGGGVVMNLAVDHPKRVRSVTLVAPISPFGFGGTREANGTPNSPDFAGSGGGTVNAG FVAAVAAGDRSDAPGSPRDVLRKFYVNPQRFQPTPEQEEAWLSAMLTTRTGDDHYPGDFTPSPHWPHVAPGTRGVANAFS PRYTNLSAFADLRPPPPVLWVRGDADVIVGDSSLFDLAQLGALGVVPGWPGPDSCPPQPMLKQLRALLERGQANGGSYRE VVLPDVGHAPFLEAPEAFLAALIEHLSEERQP
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37480; Mature: 37348
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSSRKIPTARIETHVLERPALGAATRRMLLVHGNVSSGAFFRDLLEALPADIHAAAP CCCCCCCCCCHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCHHHHHHHHHCCCHHHHCCC DLRGYGGSEAAPVDATRGLRDWSDDLVALLDALGWADAHLLGWSLGGGVVMNLAVDHPKR CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEECCCCHH VRSVTLVAPISPFGFGGTREANGTPNSPDFAGSGGGTVNAGFVAAVAAGDRSDAPGSPRD HCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCHHH VLRKFYVNPQRFQPTPEQEEAWLSAMLTTRTGDDHYPGDFTPSPHWPHVAPGTRGVANAF HHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC SPRYTNLSAFADLRPPPPVLWVRGDADVIVGDSSLFDLAQLGALGVVPGWPGPDSCPPQP CCCCCCHHHHHCCCCCCCEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHH MLKQLRALLERGQANGGSYREVVLPDVGHAPFLEAPEAFLAALIEHLSEERQP HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRLSSRKIPTARIETHVLERPALGAATRRMLLVHGNVSSGAFFRDLLEALPADIHAAAP CCCCCCCCCHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCHHHHHHHHHCCCHHHHCCC DLRGYGGSEAAPVDATRGLRDWSDDLVALLDALGWADAHLLGWSLGGGVVMNLAVDHPKR CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEECCCCHH VRSVTLVAPISPFGFGGTREANGTPNSPDFAGSGGGTVNAGFVAAVAAGDRSDAPGSPRD HCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCCCCHHH VLRKFYVNPQRFQPTPEQEEAWLSAMLTTRTGDDHYPGDFTPSPHWPHVAPGTRGVANAF HHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC SPRYTNLSAFADLRPPPPVLWVRGDADVIVGDSSLFDLAQLGALGVVPGWPGPDSCPPQP CCCCCCHHHHHCCCCCCCEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHH MLKQLRALLERGQANGGSYREVVLPDVGHAPFLEAPEAFLAALIEHLSEERQP HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA