| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984762
Identifier: 94984762
GI number: 94984762
Start: 711189
End: 712013
Strand: Reverse
Name: 94984762
Synonym: Dgeo_0655
Alternate gene names: NA
Gene position: 712013-711189 (Counterclockwise)
Preceding gene: 94984763
Following gene: 94984761
Centisome position: 28.86
GC content: 71.52
Gene sequence:
>825_bases GTGACGTCCGGCCCGCTGCTGACAACCTCGCCCCTCTCCGGCTTCGGCGTGGAGGTGGTGATGGCCTCTTCAGCAGCGCT CCCCGGCGCGGCAGGGCTGCTCGTGCCCCATGACGGGGAACCGGTCGCGGATGTGCGAGACCGGCCTGACCGCTGGACAC TGCTGACGCTGCTCGCGGAGGCTGTGCGGCGGGGCGTGCCGGTGCTCGCCTGGGGAAGCGGGGCCGCACTGGCAGGCCGG GTGCTGGGCGCGCGGGTCAGGCCGGGGGAGGGCGCGGCGGATTGGGCGGAAGCGCCGCGCGGAGCGACAGTCGAGCGCTG GCAAGGCGAGGTGCCGCTGCTGTGGCGAGCAGGACCGGTAACGGCCTGGGCTGGAGAAACCCTGCCGGAGGACTTGCGGT CCGAGTTTCTGGCGCGCCTCATGCAGGCAGAACCACGTGCGCCAGGCTCGCCGCTGGAGGTAGTGGGCGGCGAGGCGGCG CTGCGGACGATGTTGGCTGACTTCTACGCTCGGGCGCGCGCAGACACACTGCTTGGGCCGGTCTTCGCCGCCCACGTTCA GGACTGGGAGGCCCATCTGGACCGCGTGACGGCCTTCTGGGTGACGATGCTGGGCGGCGGGCCAGCCTGGCGCGGGAATC TGAACAGCGTCCATGCGGGGTTGGGCCTGCGCGGCACGCACCTGAGGCGTTGGTTGGCTCTGTTCCGAGAAGCTGCCGAA GATTGCCTCGGTCCGGAAGCGGCGGCGCCCCTCACTGCACGGGCAGAAGCGATGGGTCATCGGCTGGGCCAGAGAAACGC TCCTCACGTCGGGCGCGTACCGTAG
Upstream 100 bases:
>100_bases CTCACCGACATCTACGCCTACCTGAAGTCGCTCGTGAAGTGAAGCGGCCGCGTTCCCCCGCCAGCCTGCCCTTCCCCCCG GCAGGCTCTATTTTTGTGGT
Downstream 100 bases:
>100_bases GGGTATGACACCCTTCCACCTTCCCTTTCTCGGCCAGGACCGTGACAAGCTCCCGGACGGCGTGACCCGCCCCACTTGGG TGATCCTCGACGTGACCGGT
Product: globin
Products: NA
Alternate protein names: Globin-Like Protein; Globin Family Protein; SEC-Independent Protein Translocase Protein TatC; Sec-Independent Protein Translocase Protein TatC
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTSGPLLTTSPLSGFGVEVVMASSAALPGAAGLLVPHDGEPVADVRDRPDRWTLLTLLAEAVRRGVPVLAWGSGAALAGR VLGARVRPGEGAADWAEAPRGATVERWQGEVPLLWRAGPVTAWAGETLPEDLRSEFLARLMQAEPRAPGSPLEVVGGEAA LRTMLADFYARARADTLLGPVFAAHVQDWEAHLDRVTAFWVTMLGGGPAWRGNLNSVHAGLGLRGTHLRRWLALFREAAE DCLGPEAAAPLTARAEAMGHRLGQRNAPHVGRVP
Sequences:
>Translated_274_residues MTSGPLLTTSPLSGFGVEVVMASSAALPGAAGLLVPHDGEPVADVRDRPDRWTLLTLLAEAVRRGVPVLAWGSGAALAGR VLGARVRPGEGAADWAEAPRGATVERWQGEVPLLWRAGPVTAWAGETLPEDLRSEFLARLMQAEPRAPGSPLEVVGGEAA LRTMLADFYARARADTLLGPVFAAHVQDWEAHLDRVTAFWVTMLGGGPAWRGNLNSVHAGLGLRGTHLRRWLALFREAAE DCLGPEAAAPLTARAEAMGHRLGQRNAPHVGRVP >Mature_273_residues TSGPLLTTSPLSGFGVEVVMASSAALPGAAGLLVPHDGEPVADVRDRPDRWTLLTLLAEAVRRGVPVLAWGSGAALAGRV LGARVRPGEGAADWAEAPRGATVERWQGEVPLLWRAGPVTAWAGETLPEDLRSEFLARLMQAEPRAPGSPLEVVGGEAAL RTMLADFYARARADTLLGPVFAAHVQDWEAHLDRVTAFWVTMLGGGPAWRGNLNSVHAGLGLRGTHLRRWLALFREAAED CLGPEAAAPLTARAEAMGHRLGQRNAPHVGRVP
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29013; Mature: 28882
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGPLLTTSPLSGFGVEVVMASSAALPGAAGLLVPHDGEPVADVRDRPDRWTLLTLLAE CCCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCHHHHHHHHHH AVRRGVPVLAWGSGAALAGRVLGARVRPGEGAADWAEAPRGATVERWQGEVPLLWRAGPV HHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHCCCCCEEEECCCC TAWAGETLPEDLRSEFLARLMQAEPRAPGSPLEVVGGEAALRTMLADFYARARADTLLGP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VFAAHVQDWEAHLDRVTAFWVTMLGGGPAWRGNLNSVHAGLGLRGTHLRRWLALFREAAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH DCLGPEAAAPLTARAEAMGHRLGQRNAPHVGRVP HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSGPLLTTSPLSGFGVEVVMASSAALPGAAGLLVPHDGEPVADVRDRPDRWTLLTLLAE CCCCCEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCCCHHHHHHHHHH AVRRGVPVLAWGSGAALAGRVLGARVRPGEGAADWAEAPRGATVERWQGEVPLLWRAGPV HHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHCCCCCEEEECCCC TAWAGETLPEDLRSEFLARLMQAEPRAPGSPLEVVGGEAALRTMLADFYARARADTLLGP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VFAAHVQDWEAHLDRVTAFWVTMLGGGPAWRGNLNSVHAGLGLRGTHLRRWLALFREAAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH DCLGPEAAAPLTARAEAMGHRLGQRNAPHVGRVP HHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA