| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ilvB [H]
Identifier: 94984709
GI number: 94984709
Start: 642652
End: 644373
Strand: Reverse
Name: ilvB [H]
Synonym: Dgeo_0602
Alternate gene names: 94984709
Gene position: 644373-642652 (Counterclockwise)
Preceding gene: 94984710
Following gene: 94984708
Centisome position: 26.12
GC content: 66.78
Gene sequence:
>1722_bases ATGACGCAGGGGGAGATGACGGGCGCCAAGGCGCTGTGGGCGACGCTGGTCCGGCACGGCATCAACACCGTGTTCGGCTA TCCGGGTGGGGCGATTATGCCCGTGTATGACGCGCTGACTTTCTACCCAGAGGTCCGGCACATCCTCACGCGCCACGAGC AGGGGGCCATCCACGCGGCAGAAGGCTGGGCCAAGGCGACCGGCGAAATCGGCGTGTGTCTTGCCACGTCGGGGCCGGGG GCCACCAACCTGGTGACCGGCCTGGCGGACGCGATGATGGACTCGGTGCCGATCCTCGCCATCACCGGGAACGTGGCACG GCACCTGATGGGCACCGATGCCTTTCAGGAGGCAGATATCACCGGGATCACGCTGCCCATCACCAAGCACAACTACGTGG TGCGGGAGGTGGAGGAGTTGCCCCGCATTCTCGCGGAGGCGATCCGCATCGCGCGCAGCGGGCGGCCCGGCCCAGTGCTG GTCGACATTCCCAAGGACATCCAGCTCGCGCCCTATCACGGAGAGATTGCCGCACCGCATGCGCGGCCAGAAGCCCCCGC CCCCGCGCCCGAAGCCATTCAGCGTGCCCGCGAGCTGCTGCGAGGAGCAAAAAAGCCCGTTCTCCTCGTGGGCGGCGGCT CGTTGGATGCAGCGGCAGAGATCACCGCGCTGGCCCGCGCCTGGCATCTTCCGGTGATCACCACCCTGATGGGCTTAGGG GCCTTTCCAGCGAGCGATCCGCTGTGGCTGGGCATGCCGGGCATGCACGGCTCGGTCGCGGCCAACCGTGCGATCAGCGA GGCAGACGTGCTGCTGGGTATCGGGCTCCGCTTTGACGACCGGGTGACGGGCCGAGTGAACGGCTTTGCGCCGAATGCCG CCATCATCCACGTCGAACTCGATGCCGCTGAGATCGGCAAGATCGTGCGAACACACGTGCCGGTGCGCGGGGACGCCGCG ATCGCCGCCCGGCTGCTGACAGAGGGCGCACAGCGGCTCGACTTGCCGGAATGGCAGGCACAGCTTGAGGCGTGGAAGGC GCGCACGCAAAAACCCGACCACTGGGGCGCAGCCTCTGCGGTGCAGGCCGTCGTGGAACGCCTGCGCCCCGACGACATCC TCGCTTCCGACGTGGGACAGCACCAGATGCTGGCCGCACAGCTCGCCCGTTTCGAACGGCCCCGGCGCTGGCTGAACTCG GGCGGCCTGGGCACCATGGGCTTCGGCTTCCCAGCGGCGATCGGGGCGGCCTTGGCTGAGCCAGGCGTGCGCTCCGTGGT AATTGCCGGGGACGGCGGTTTTCAGATGACCGCCCAGGAACTCGCCACCCTCAAGATGTACGACATCCGCAACGTCAAGA TCTGCATCATCAACAATTCCTATCTGGGAATGGTGCGCCAGTGGCAAGAACTCTTCCACGAGCGCCGCTACTCCGAGGTG TGGTTGGGTGACTCCAATCCCGACTTCCTAAAGCTGGCCGATGCCTACGGCGTTCCTGGCTACCGCGCCGATTGCGCCGA GGAACTCCCAGCGGCCATCAACGCCTGGCTGGCCGACCCCAAAAGTGCCCTGCTGGAGATTGTGGTGCCCCACGAGCACG GCGTCTTTCCGATGGTGCCCGCCGGAGCGGCCCTCAGCGAGATGATCGAACAAGAGCCGCCCCGCGTTCCCACGCCGGGG ATTGAGAAAAATGCCGCCGCCAAGGAGGCACAGGACGCATGA
Upstream 100 bases:
>100_bases ACTGGAAAACGGCCCGTCCGGAGACAACGCCACGGGCCACCTGCCGCGCCGCGCCGCCTCTTGGTGAGCGTGGCGCGCGC GCTTTGGCGGGAGGTCAGGC
Downstream 100 bases:
>100_bases CTGACCCCACCCCACGTGACCACCTCGTCTCCGCCCTGGTGCGCGACGAGCCGCGTGTCCTGACCCGCATCACCTCCCTC TTCGGGCGGCGCGGGTACAA
Product: acetolactate synthase, large subunit, biosynthetic type
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS; Vegetative protein 105; VEG105 [H]
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTQGEMTGAKALWATLVRHGINTVFGYPGGAIMPVYDALTFYPEVRHILTRHEQGAIHAAEGWAKATGEIGVCLATSGPG ATNLVTGLADAMMDSVPILAITGNVARHLMGTDAFQEADITGITLPITKHNYVVREVEELPRILAEAIRIARSGRPGPVL VDIPKDIQLAPYHGEIAAPHARPEAPAPAPEAIQRARELLRGAKKPVLLVGGGSLDAAAEITALARAWHLPVITTLMGLG AFPASDPLWLGMPGMHGSVAANRAISEADVLLGIGLRFDDRVTGRVNGFAPNAAIIHVELDAAEIGKIVRTHVPVRGDAA IAARLLTEGAQRLDLPEWQAQLEAWKARTQKPDHWGAASAVQAVVERLRPDDILASDVGQHQMLAAQLARFERPRRWLNS GGLGTMGFGFPAAIGAALAEPGVRSVVIAGDGGFQMTAQELATLKMYDIRNVKICIINNSYLGMVRQWQELFHERRYSEV WLGDSNPDFLKLADAYGVPGYRADCAEELPAAINAWLADPKSALLEIVVPHEHGVFPMVPAGAALSEMIEQEPPRVPTPG IEKNAAAKEAQDA
Sequences:
>Translated_573_residues MTQGEMTGAKALWATLVRHGINTVFGYPGGAIMPVYDALTFYPEVRHILTRHEQGAIHAAEGWAKATGEIGVCLATSGPG ATNLVTGLADAMMDSVPILAITGNVARHLMGTDAFQEADITGITLPITKHNYVVREVEELPRILAEAIRIARSGRPGPVL VDIPKDIQLAPYHGEIAAPHARPEAPAPAPEAIQRARELLRGAKKPVLLVGGGSLDAAAEITALARAWHLPVITTLMGLG AFPASDPLWLGMPGMHGSVAANRAISEADVLLGIGLRFDDRVTGRVNGFAPNAAIIHVELDAAEIGKIVRTHVPVRGDAA IAARLLTEGAQRLDLPEWQAQLEAWKARTQKPDHWGAASAVQAVVERLRPDDILASDVGQHQMLAAQLARFERPRRWLNS GGLGTMGFGFPAAIGAALAEPGVRSVVIAGDGGFQMTAQELATLKMYDIRNVKICIINNSYLGMVRQWQELFHERRYSEV WLGDSNPDFLKLADAYGVPGYRADCAEELPAAINAWLADPKSALLEIVVPHEHGVFPMVPAGAALSEMIEQEPPRVPTPG IEKNAAAKEAQDA >Mature_572_residues TQGEMTGAKALWATLVRHGINTVFGYPGGAIMPVYDALTFYPEVRHILTRHEQGAIHAAEGWAKATGEIGVCLATSGPGA TNLVTGLADAMMDSVPILAITGNVARHLMGTDAFQEADITGITLPITKHNYVVREVEELPRILAEAIRIARSGRPGPVLV DIPKDIQLAPYHGEIAAPHARPEAPAPAPEAIQRARELLRGAKKPVLLVGGGSLDAAAEITALARAWHLPVITTLMGLGA FPASDPLWLGMPGMHGSVAANRAISEADVLLGIGLRFDDRVTGRVNGFAPNAAIIHVELDAAEIGKIVRTHVPVRGDAAI AARLLTEGAQRLDLPEWQAQLEAWKARTQKPDHWGAASAVQAVVERLRPDDILASDVGQHQMLAAQLARFERPRRWLNSG GLGTMGFGFPAAIGAALAEPGVRSVVIAGDGGFQMTAQELATLKMYDIRNVKICIINNSYLGMVRQWQELFHERRYSEVW LGDSNPDFLKLADAYGVPGYRADCAEELPAAINAWLADPKSALLEIVVPHEHGVFPMVPAGAALSEMIEQEPPRVPTPGI EKNAAAKEAQDA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=564, Percent_Identity=28.1914893617021, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI21361361, Length=495, Percent_Identity=28.0808080808081, Blast_Score=155, Evalue=1e-37, Organism=Escherichia coli, GI1790104, Length=558, Percent_Identity=44.8028673835125, Blast_Score=453, Evalue=1e-128, Organism=Escherichia coli, GI87081685, Length=569, Percent_Identity=42.7065026362039, Blast_Score=452, Evalue=1e-128, Organism=Escherichia coli, GI1786717, Length=534, Percent_Identity=35.5805243445693, Blast_Score=302, Evalue=4e-83, Organism=Escherichia coli, GI1787096, Length=549, Percent_Identity=27.3224043715847, Blast_Score=169, Evalue=6e-43, Organism=Escherichia coli, GI1788716, Length=566, Percent_Identity=27.3851590106007, Blast_Score=148, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17531301, Length=493, Percent_Identity=29.8174442190669, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17531299, Length=493, Percent_Identity=29.8174442190669, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17542570, Length=528, Percent_Identity=25.3787878787879, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323755, Length=581, Percent_Identity=42.3407917383821, Blast_Score=417, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6320816, Length=485, Percent_Identity=26.3917525773196, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321524, Length=531, Percent_Identity=22.2222222222222, Blast_Score=90, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323163, Length=555, Percent_Identity=23.7837837837838, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI19922626, Length=547, Percent_Identity=27.6051188299817, Blast_Score=157, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61277; Mature: 61146
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGEMTGAKALWATLVRHGINTVFGYPGGAIMPVYDALTFYPEVRHILTRHEQGAIHAA CCCCCCCHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECC EGWAKATGEIGVCLATSGPGATNLVTGLADAMMDSVPILAITGNVARHLMGTDAFQEADI CCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHCCCC TGITLPITKHNYVVREVEELPRILAEAIRIARSGRPGPVLVDIPKDIQLAPYHGEIAAPH CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCC ARPEAPAPAPEAIQRARELLRGAKKPVLLVGGGSLDAAAEITALARAWHLPVITTLMGLG CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC AFPASDPLWLGMPGMHGSVAANRAISEADVLLGIGLRFDDRVTGRVNGFAPNAAIIHVEL CCCCCCCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEE DAAEIGKIVRTHVPVRGDAAIAARLLTEGAQRLDLPEWQAQLEAWKARTQKPDHWGAASA CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH VQAVVERLRPDDILASDVGQHQMLAAQLARFERPRRWLNSGGLGTMGFGFPAAIGAALAE HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC PGVRSVVIAGDGGFQMTAQELATLKMYDIRNVKICIINNSYLGMVRQWQELFHERRYSEV CCCCEEEEECCCCCCHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCEE WLGDSNPDFLKLADAYGVPGYRADCAEELPAAINAWLADPKSALLEIVVPHEHGVFPMVP EECCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCC AGAALSEMIEQEPPRVPTPGIEKNAAAKEAQDA CCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TQGEMTGAKALWATLVRHGINTVFGYPGGAIMPVYDALTFYPEVRHILTRHEQGAIHAA CCCCCCHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECC EGWAKATGEIGVCLATSGPGATNLVTGLADAMMDSVPILAITGNVARHLMGTDAFQEADI CCHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHCCCC TGITLPITKHNYVVREVEELPRILAEAIRIARSGRPGPVLVDIPKDIQLAPYHGEIAAPH CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCC ARPEAPAPAPEAIQRARELLRGAKKPVLLVGGGSLDAAAEITALARAWHLPVITTLMGLG CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC AFPASDPLWLGMPGMHGSVAANRAISEADVLLGIGLRFDDRVTGRVNGFAPNAAIIHVEL CCCCCCCEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCCCEEEEEEEE DAAEIGKIVRTHVPVRGDAAIAARLLTEGAQRLDLPEWQAQLEAWKARTQKPDHWGAASA CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH VQAVVERLRPDDILASDVGQHQMLAAQLARFERPRRWLNSGGLGTMGFGFPAAIGAALAE HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC PGVRSVVIAGDGGFQMTAQELATLKMYDIRNVKICIINNSYLGMVRQWQELFHERRYSEV CCCCEEEEECCCCCCHHHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCEE WLGDSNPDFLKLADAYGVPGYRADCAEELPAAINAWLADPKSALLEIVVPHEHGVFPMVP EECCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCC AGAALSEMIEQEPPRVPTPGIEKNAAAKEAQDA CCHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377; 1577690; 9298659 [H]