Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94984447

Identifier: 94984447

GI number: 94984447

Start: 340611

End: 341261

Strand: Reverse

Name: 94984447

Synonym: Dgeo_0339

Alternate gene names: NA

Gene position: 341261-340611 (Counterclockwise)

Preceding gene: 94984448

Following gene: 94984446

Centisome position: 13.83

GC content: 66.05

Gene sequence:

>651_bases
GTGCCCCCGCCCCCGTTGCCCAGGAACGCGGGCGCCTATCATGGAGGGATGACCGACTCCCCCCACATTCACCTGGGTTC
ACTCCTGCGCTCGGCCACCGACGCGCACGTGGAAGGCGAACTCGACCATCTGATCTATGAGCAGGGTGGCCGCGAGCAGA
CGCTGCGCTTCGCGCGCCGGGCACCTTACCGGGTGGACGTCAACCCTTTGGGCGGTGGAGAAATGTATCTCCAGGGCCGC
TTTGCGCCCACCCTGATTCTCGAATGTGCCCGCTGCCTGCGCGACGTCGAGGTGCCGCTGGACCTCAAGCTGGGTACCCT
GATGCGCCACGACCCAGCCGTGAACGCCCCCTATCTGGAGGAAGCTGAGACCGGCGAGGAGGTCCTGGTCTTCGGTCATC
CCGACCTGGATCTCAGCGCCTACCTGGCCGAGACAGCGCTGCTGGCCGCACCCCTGACGGTGCTGCATGCCCCCGATTGC
AAGGGGTTATGTCAGGTTTGCGGCCACGACCTGAACGAGGGGCCATGCGAACATCTGGCGCAGGTGCCTATCGAGGAGAT
CGACGACGCGCTGGGTACGCCTGAGGGATTGGCGCACGCCCGGCAGAATCCCTTCGCCGCTCTGCGCGACCTTAACCTCC
CCGAGGACTGA

Upstream 100 bases:

>100_bases
TGCGCCCCCTGTCCGGAATGACACTGCGGCCTGACCCTGCTTCTACGGGTAAGTGCTACGGGAAAGCGTGGCGAACCCAA
CTGGAGGTTTCCGTCTGACC

Downstream 100 bases:

>100_bases
GGGTGAGCCCAGAGCAGGACACCTCCCCAGAGCTGACCCATTTCCGTGATGGTCTGCCGCGCATGGTCGATGTCACCGAA
AAGGCGGCCACCCTGCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGR
FAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDC
KGLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED

Sequences:

>Translated_216_residues
MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGR
FAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDC
KGLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED
>Mature_215_residues
PPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGRF
APTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCK
GLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23468; Mature: 23337

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC
APYRVDVNPLGGGEMYLQGRFAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLE
CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC
EAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCKGLCQVCGHDLNEGPCEHLA
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHH
QVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED
HCCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC
APYRVDVNPLGGGEMYLQGRFAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLE
CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC
EAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCKGLCQVCGHDLNEGPCEHLA
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHH
QVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED
HCCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA