| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984447
Identifier: 94984447
GI number: 94984447
Start: 340611
End: 341261
Strand: Reverse
Name: 94984447
Synonym: Dgeo_0339
Alternate gene names: NA
Gene position: 341261-340611 (Counterclockwise)
Preceding gene: 94984448
Following gene: 94984446
Centisome position: 13.83
GC content: 66.05
Gene sequence:
>651_bases GTGCCCCCGCCCCCGTTGCCCAGGAACGCGGGCGCCTATCATGGAGGGATGACCGACTCCCCCCACATTCACCTGGGTTC ACTCCTGCGCTCGGCCACCGACGCGCACGTGGAAGGCGAACTCGACCATCTGATCTATGAGCAGGGTGGCCGCGAGCAGA CGCTGCGCTTCGCGCGCCGGGCACCTTACCGGGTGGACGTCAACCCTTTGGGCGGTGGAGAAATGTATCTCCAGGGCCGC TTTGCGCCCACCCTGATTCTCGAATGTGCCCGCTGCCTGCGCGACGTCGAGGTGCCGCTGGACCTCAAGCTGGGTACCCT GATGCGCCACGACCCAGCCGTGAACGCCCCCTATCTGGAGGAAGCTGAGACCGGCGAGGAGGTCCTGGTCTTCGGTCATC CCGACCTGGATCTCAGCGCCTACCTGGCCGAGACAGCGCTGCTGGCCGCACCCCTGACGGTGCTGCATGCCCCCGATTGC AAGGGGTTATGTCAGGTTTGCGGCCACGACCTGAACGAGGGGCCATGCGAACATCTGGCGCAGGTGCCTATCGAGGAGAT CGACGACGCGCTGGGTACGCCTGAGGGATTGGCGCACGCCCGGCAGAATCCCTTCGCCGCTCTGCGCGACCTTAACCTCC CCGAGGACTGA
Upstream 100 bases:
>100_bases TGCGCCCCCTGTCCGGAATGACACTGCGGCCTGACCCTGCTTCTACGGGTAAGTGCTACGGGAAAGCGTGGCGAACCCAA CTGGAGGTTTCCGTCTGACC
Downstream 100 bases:
>100_bases GGGTGAGCCCAGAGCAGGACACCTCCCCAGAGCTGACCCATTTCCGTGATGGTCTGCCGCGCATGGTCGATGTCACCGAA AAGGCGGCCACCCTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGR FAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDC KGLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED
Sequences:
>Translated_216_residues MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGR FAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDC KGLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED >Mature_215_residues PPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARRAPYRVDVNPLGGGEMYLQGRF APTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLEEAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCK GLCQVCGHDLNEGPCEHLAQVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23468; Mature: 23337
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC APYRVDVNPLGGGEMYLQGRFAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLE CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC EAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCKGLCQVCGHDLNEGPCEHLA CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHH QVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED HCCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure PPPPLPRNAGAYHGGMTDSPHIHLGSLLRSATDAHVEGELDHLIYEQGGREQTLRFARR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHC APYRVDVNPLGGGEMYLQGRFAPTLILECARCLRDVEVPLDLKLGTLMRHDPAVNAPYLE CCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC EAETGEEVLVFGHPDLDLSAYLAETALLAAPLTVLHAPDCKGLCQVCGHDLNEGPCEHLA CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCHHHHHH QVPIEEIDDALGTPEGLAHARQNPFAALRDLNLPED HCCHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA