| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984387
Identifier: 94984387
GI number: 94984387
Start: 274131
End: 276341
Strand: Reverse
Name: 94984387
Synonym: Dgeo_0279
Alternate gene names: NA
Gene position: 276341-274131 (Counterclockwise)
Preceding gene: 94984391
Following gene: 94984386
Centisome position: 11.2
GC content: 64.86
Gene sequence:
>2211_bases ATGCCCTCTTCGGAGCAGCCTGCACAGCCCCGCAGTGCCCTTCGCCGCTGGTTTCTAGAGACCGAAACACCCCAACAGGA CCGCGAGGGATTCTACGAGAACGAGCAAGCTGCGCAGACCCAGCACCACCAGCATCCCTGGTGGCAAGTGATGTGCCTCA CCGGCGTGGACTACTTCTCCAGCCTAGGCTACGCGCCGGGCATCGCCTTTCTGGCAGCGGGGGCGCTCTCCCCTATAGCG ACACTGGTGCTGGTGCTGGTGACGCTGGGTTGCGCCCTGCCGATGTATCGACGGGTCGCCTACGAAAGCCCACACGGCGA CGGCTCCCTGAGCATGCTCGAGCGGCTACTCACCTACTGGCCCAGCAAACTGCTGGTGCTGGCGCTGCTCGGCTTTGTCG CCACAGGCTTTGTGGTCACCATCACACTCTCGGCGGCGGATGCGGCAGCGCACCTGATCGAAAACCCCTTTTTCAAGAAC GTGCTGGCAGGTCAGCAGGTCATCGTCACGCTGGCCCTGATCGCCTTGCTGGGAGCGGTGTTTCTCAAAGGTTTTAAAGA GGCCATCGGAATTGCGGTCGCACTGGTGGTGCTGTATCTGGGACTGAATGTGATCCTGATTGGGCGCGGCTTGGTGGAGG TGGTGACCCATGCGAATCTGGTGGGCGACTGGTGGTCAGGCCTGCGGCAGACCTACTTGTCGCCGCTCGCGCTCATCGGC GCGGCGCTGCTGGTGTTTCCCCGGCTGGCGCTGGGGATGAGCGGTTTCGAGACCGGCGTGCTGGTGATGCCGCTGGTCCG TGGCAAGCCCGGCGATACGCCCGAACGGCCGCTGGGACGCATTCAGAATGCCCGCAAGCTGCTCACCACCGCTGCCATCA TCATGAGCACCCTGCTGCTCTCCTCATCGGTGGTGAGTACCGTGCTGACCCCCCCCGCCGCCTTCTGGCCCGCCATCACC TATACCCACGGCGTCAATGCCGGCGACCTCACGCGCGGCAGCGCGGTGGTCAATGTGCCGCTGGACAGCGCGGATAACCC GCAACAGTTCTATACCCTACAGCTGCCCGCCAGCAGCCCCACCGGCCCACGCAGCTTCAAGATGCAGGCCCAGACAGTGG GTGGCCCGGTAACGCTGAACGTCACGGTCACGCCCACCTCGCCCGGCTCAGCGGTGGTCACAGTGACCAAAGCAGCGGGC GAAGCGAACGGCCGCGCCCTGGCTTACCTCGCCCACCGACTGCTGGGCGAGGGCTTCGGCACCCTGTATGACATCAGCAC CATCCTGATTCTGTGGTTTGCGGGAGCAAGCGCGATGACCGGGCTGCTCAACATCGTGCCCCGCTACCTGCCGCGCTACG GCATGGCCCCCGACTGGGCACGCGCCACCCGCCCCCTGGTGGTGATTTTCACAGCGATCTGTTTCCTGGTCACGCTGCTG TTCCGCGCGGACGTCAACGCGCAGGGCGGCGCCTACGCGACTGGCGTCCTGGCCCTGATGACCTCGGCGGCCGTCGCTGT CTTTCTCACCGAACTGCGGCGGCGGCACCGGGTTACGTCCGTCTTTTTTGGCCTGGTCAGCGCAATCTTTATCTACACCA TCAGCGTCACGATCCTGGGACAGCCTCAGGGCCTCTACATCGCCCTGCTGTTTATTGCGGCAATTCTGGTGGTCAGCGTG GCCTCGCGGGTGAGCCGCTCGACCGAGCTGCGCGTCTCACAGGTCACGTTCGACGCGGAGGCCACCCGGCTGCTGCGTGA CACAGCCCGACGAGGACTGCCGCTGCGTTTCATCGCCAACCGCCTGAATGCCGGTGACAGCCGTGAGTACCGCCTCAAGG AACTGGAGGTGCGCCTAGACACCCACCTGCCACAGGGCGAACCAGCCGTGTTTCTCGAGGTGGTTGTGACCGACCCCAGC AACTTCAGCGATACGGTCACCGTCACCGGGGTGCAAGTTGGGCGCTACGCGATTCTGCGCGCACGCGGCAACAGCGTACC CAACACCATTGCCGCCGTGCTGCTGCACGTGCGTGACCGGACAGGCGTCCCGCCCCACGTCTACTTTGAGTGGAGCGAGA AAGGTCCGGCGGTCAACGCCCTGCGCTTCTTGTTGGCCGGGGAAGGTGACATCCCGCCCCTCACCCATGAGGTCTTACGC CTGGCCGAACCTGACCCAGTTCGCCGCCCGGTGGTTCACGTCGGCGGGTAA
Upstream 100 bases:
>100_bases GCGGGGGTGACTTGGCGGCGCCGTTTCCTAAAGCTTCTCTCCTTCTGGAGAAACGAGATCACTTGATGCGGGCCGAGAGT GGGCGGTATACACTCCACCA
Downstream 100 bases:
>100_bases TCAGGCCGTCATGCAAAGCCGTGAGCACTTCAAAGCCGTCTTGGTTGCCGCTGACGCCAGCGACTGGAGGTAACCGCTCT CCACAAGGCGCTCACAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein LysR Family Signature Domain Protein; Integral Membrane Protein; Regulatory Protein
Number of amino acids: Translated: 736; Mature: 735
Protein sequence:
>736_residues MPSSEQPAQPRSALRRWFLETETPQQDREGFYENEQAAQTQHHQHPWWQVMCLTGVDYFSSLGYAPGIAFLAAGALSPIA TLVLVLVTLGCALPMYRRVAYESPHGDGSLSMLERLLTYWPSKLLVLALLGFVATGFVVTITLSAADAAAHLIENPFFKN VLAGQQVIVTLALIALLGAVFLKGFKEAIGIAVALVVLYLGLNVILIGRGLVEVVTHANLVGDWWSGLRQTYLSPLALIG AALLVFPRLALGMSGFETGVLVMPLVRGKPGDTPERPLGRIQNARKLLTTAAIIMSTLLLSSSVVSTVLTPPAAFWPAIT YTHGVNAGDLTRGSAVVNVPLDSADNPQQFYTLQLPASSPTGPRSFKMQAQTVGGPVTLNVTVTPTSPGSAVVTVTKAAG EANGRALAYLAHRLLGEGFGTLYDISTILILWFAGASAMTGLLNIVPRYLPRYGMAPDWARATRPLVVIFTAICFLVTLL FRADVNAQGGAYATGVLALMTSAAVAVFLTELRRRHRVTSVFFGLVSAIFIYTISVTILGQPQGLYIALLFIAAILVVSV ASRVSRSTELRVSQVTFDAEATRLLRDTARRGLPLRFIANRLNAGDSREYRLKELEVRLDTHLPQGEPAVFLEVVVTDPS NFSDTVTVTGVQVGRYAILRARGNSVPNTIAAVLLHVRDRTGVPPHVYFEWSEKGPAVNALRFLLAGEGDIPPLTHEVLR LAEPDPVRRPVVHVGG
Sequences:
>Translated_736_residues MPSSEQPAQPRSALRRWFLETETPQQDREGFYENEQAAQTQHHQHPWWQVMCLTGVDYFSSLGYAPGIAFLAAGALSPIA TLVLVLVTLGCALPMYRRVAYESPHGDGSLSMLERLLTYWPSKLLVLALLGFVATGFVVTITLSAADAAAHLIENPFFKN VLAGQQVIVTLALIALLGAVFLKGFKEAIGIAVALVVLYLGLNVILIGRGLVEVVTHANLVGDWWSGLRQTYLSPLALIG AALLVFPRLALGMSGFETGVLVMPLVRGKPGDTPERPLGRIQNARKLLTTAAIIMSTLLLSSSVVSTVLTPPAAFWPAIT YTHGVNAGDLTRGSAVVNVPLDSADNPQQFYTLQLPASSPTGPRSFKMQAQTVGGPVTLNVTVTPTSPGSAVVTVTKAAG EANGRALAYLAHRLLGEGFGTLYDISTILILWFAGASAMTGLLNIVPRYLPRYGMAPDWARATRPLVVIFTAICFLVTLL FRADVNAQGGAYATGVLALMTSAAVAVFLTELRRRHRVTSVFFGLVSAIFIYTISVTILGQPQGLYIALLFIAAILVVSV ASRVSRSTELRVSQVTFDAEATRLLRDTARRGLPLRFIANRLNAGDSREYRLKELEVRLDTHLPQGEPAVFLEVVVTDPS NFSDTVTVTGVQVGRYAILRARGNSVPNTIAAVLLHVRDRTGVPPHVYFEWSEKGPAVNALRFLLAGEGDIPPLTHEVLR LAEPDPVRRPVVHVGG >Mature_735_residues PSSEQPAQPRSALRRWFLETETPQQDREGFYENEQAAQTQHHQHPWWQVMCLTGVDYFSSLGYAPGIAFLAAGALSPIAT LVLVLVTLGCALPMYRRVAYESPHGDGSLSMLERLLTYWPSKLLVLALLGFVATGFVVTITLSAADAAAHLIENPFFKNV LAGQQVIVTLALIALLGAVFLKGFKEAIGIAVALVVLYLGLNVILIGRGLVEVVTHANLVGDWWSGLRQTYLSPLALIGA ALLVFPRLALGMSGFETGVLVMPLVRGKPGDTPERPLGRIQNARKLLTTAAIIMSTLLLSSSVVSTVLTPPAAFWPAITY THGVNAGDLTRGSAVVNVPLDSADNPQQFYTLQLPASSPTGPRSFKMQAQTVGGPVTLNVTVTPTSPGSAVVTVTKAAGE ANGRALAYLAHRLLGEGFGTLYDISTILILWFAGASAMTGLLNIVPRYLPRYGMAPDWARATRPLVVIFTAICFLVTLLF RADVNAQGGAYATGVLALMTSAAVAVFLTELRRRHRVTSVFFGLVSAIFIYTISVTILGQPQGLYIALLFIAAILVVSVA SRVSRSTELRVSQVTFDAEATRLLRDTARRGLPLRFIANRLNAGDSREYRLKELEVRLDTHLPQGEPAVFLEVVVTDPSN FSDTVTVTGVQVGRYAILRARGNSVPNTIAAVLLHVRDRTGVPPHVYFEWSEKGPAVNALRFLLAGEGDIPPLTHEVLRL AEPDPVRRPVVHVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79268; Mature: 79137
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSEQPAQPRSALRRWFLETETPQQDREGFYENEQAAQTQHHQHPWWQVMCLTGVDYFS CCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHCCCCCHHEEHHHHHHHHHH SLGYAPGIAFLAAGALSPIATLVLVLVTLGCALPMYRRVAYESPHGDGSLSMLERLLTYW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC PSKLLVLALLGFVATGFVVTITLSAADAAAHLIENPFFKNVLAGQQVIVTLALIALLGAV CHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLKGFKEAIGIAVALVVLYLGLNVILIGRGLVEVVTHANLVGDWWSGLRQTYLSPLALIG HHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLVFPRLALGMSGFETGVLVMPLVRGKPGDTPERPLGRIQNARKLLTTAAIIMSTLLL HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSSVVSTVLTPPAAFWPAITYTHGVNAGDLTRGSAVVNVPLDSADNPQQFYTLQLPASSP HHHHHHHHHCCCHHHHCCHHEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC TGPRSFKMQAQTVGGPVTLNVTVTPTSPGSAVVTVTKAAGEANGRALAYLAHRLLGEGFG CCCCCEEEEHEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCH TLYDISTILILWFAGASAMTGLLNIVPRYLPRYGMAPDWARATRPLVVIFTAICFLVTLL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHH FRADVNAQGGAYATGVLALMTSAAVAVFLTELRRRHRVTSVFFGLVSAIFIYTISVTILG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE QPQGLYIALLFIAAILVVSVASRVSRSTELRVSQVTFDAEATRLLRDTARRGLPLRFIAN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHCCCCHHHHHH RLNAGDSREYRLKELEVRLDTHLPQGEPAVFLEVVVTDPSNFSDTVTVTGVQVGRYAILR HHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCEEEEE ARGNSVPNTIAAVLLHVRDRTGVPPHVYFEWSEKGPAVNALRFLLAGEGDIPPLTHEVLR ECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHH LAEPDPVRRPVVHVGG HCCCCCCCCCCEECCC >Mature Secondary Structure PSSEQPAQPRSALRRWFLETETPQQDREGFYENEQAAQTQHHQHPWWQVMCLTGVDYFS CCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHCCCCCHHEEHHHHHHHHHH SLGYAPGIAFLAAGALSPIATLVLVLVTLGCALPMYRRVAYESPHGDGSLSMLERLLTYW HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC PSKLLVLALLGFVATGFVVTITLSAADAAAHLIENPFFKNVLAGQQVIVTLALIALLGAV CHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLKGFKEAIGIAVALVVLYLGLNVILIGRGLVEVVTHANLVGDWWSGLRQTYLSPLALIG HHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLVFPRLALGMSGFETGVLVMPLVRGKPGDTPERPLGRIQNARKLLTTAAIIMSTLLL HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSSVVSTVLTPPAAFWPAITYTHGVNAGDLTRGSAVVNVPLDSADNPQQFYTLQLPASSP HHHHHHHHHCCCHHHHCCHHEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC TGPRSFKMQAQTVGGPVTLNVTVTPTSPGSAVVTVTKAAGEANGRALAYLAHRLLGEGFG CCCCCEEEEHEECCCEEEEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCH TLYDISTILILWFAGASAMTGLLNIVPRYLPRYGMAPDWARATRPLVVIFTAICFLVTLL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHH FRADVNAQGGAYATGVLALMTSAAVAVFLTELRRRHRVTSVFFGLVSAIFIYTISVTILG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE QPQGLYIALLFIAAILVVSVASRVSRSTELRVSQVTFDAEATRLLRDTARRGLPLRFIAN CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHCCCCHHHHHH RLNAGDSREYRLKELEVRLDTHLPQGEPAVFLEVVVTDPSNFSDTVTVTGVQVGRYAILR HHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCEEEEE ARGNSVPNTIAAVLLHVRDRTGVPPHVYFEWSEKGPAVNALRFLLAGEGDIPPLTHEVLR ECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHH LAEPDPVRRPVVHVGG HCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA