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The map label for this gene is yehY [H]

Identifier: 94984281

GI number: 94984281

Start: 161681

End: 162874

Strand: Reverse

Name: yehY [H]

Synonym: Dgeo_0173

Alternate gene names: 94984281

Gene position: 162874-161681 (Counterclockwise)

Preceding gene: 94984282

Following gene: 94984280

Centisome position: 6.6

GC content: 69.51

Gene sequence:

>1194_bases
GTGAGGGTCGCCGGACAGCAGGAGGCGAGCTGGGCTGTCGCCCCCGCGACTGTCTCGGGAACGAACACGGTTCTGATGCT
GGCCATGCTGCCGATGCTGCTGGGCGCGCTGCTGCCCTGGGTGCTCCTGCGACCCAACCGCCTCGCACCGGGCACGTATC
TGCACCTGCCACCTGCTCTGGTGGGTGCGGCGCTGCTGCTGGCTGTATTGCCGCTCCTCACGGCCCGCTTCACTCCACGT
CTAACCTGGCTGGCTGCGGCCCTGGCAGTTGTGGCAGGGTTCTGGTGGCTGGGGAGTCAGACTCGGGCAGCACTGCTGAA
CCAGCTTCCCTTTGCGCGGGCGAGTGCCGCCAGTGGGGTATGGCTGTTTTTATTAGGCGCAGGCGTCGCCGCCTACGGAG
CGGGTCTGCTGAGCCGGTGCCGTGCGGAACGCTGGCTCGCTTGGGCCTGGCTGCCTGTGGTCACAGTCCTGTTCCTATCC
GGGCATCTGAACGCCTGGTCGGTCCTGGTTGAGGGCCGCAACGAGGGACCGCGCTGGGTGCAGGAATGGGTGCAGCACCT
GCGGCTGGTGGGGGAAGGGCTGGGCCTAGCCTTGCTGATCGGCGCGCCGCTGGCGGTGTGGGCCACGGGCCGCGAACGGG
TGGCCAGCGCAGTGCTGGGCGCAGCAAATGCCGTCCAAACCCTGCCCAGTCTCGCCCTGTTGGGCCTTCTCATTGCGCCG
CTGGCAGCCCTGGCGAATGCCTTTCCAGGCCTGCGGACCCTGGGCATAAGCGGCATCGGCGTGGCTCCAGCGCTCACCGC
CCTGACGCTGTATGCGCTGCTGCCGATCCTGCGCAATGGTGTGGTGGCGCTGCGGGGCGTGCCAACCGGTGTGGTCGACG
CCGCACGCGGCATGGGCATGACACCGGCGCAACTGTTCTGGCGGGTACGGCTGCCCCTGGCTTTGCCGGTCTGGCTCAGT
GGCATCCGGCAGGCCGCCGTGCTGCTGGTGGGCGTGGCGGCGGTGGCCGCCCTGATTGGCGCTGGGGGATTGGGCACCTA
CATCTTCAAGGGCCTCCAAAGTGCCGCCGCCGACCTGATCCTGCTCGGTGCGGTGCCCGCTGCCCTGCTCGCCCTAGGGC
TGGACGCCGCCCTGCGCGGGCTGGAGAGGCTGCTGGGGCAACGGCTGGGCAGCGTGCAGGGTAGGGTCGCGTGA

Upstream 100 bases:

>100_bases
GCGCAGGAGGTGGCCCAAAGCTACCTCAAGAGCAAGGGGCTGATCAAGTGATCCCGCAACGCCTGGAACGCTGCTGCCCG
CGCGGGGACAAGCGTCTCGC

Downstream 100 bases:

>100_bases
GGGGTGGCAAGAGACAGGCTGCAGTGCGTGCTTGTGCCCACGTCCCGCCTCCGGAGCCGTTATGATCGAACTGCAACACC
TCGAAAAGCGTTACGGCGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MRVAGQQEASWAVAPATVSGTNTVLMLAMLPMLLGALLPWVLLRPNRLAPGTYLHLPPALVGAALLLAVLPLLTARFTPR
LTWLAAALAVVAGFWWLGSQTRAALLNQLPFARASAASGVWLFLLGAGVAAYGAGLLSRCRAERWLAWAWLPVVTVLFLS
GHLNAWSVLVEGRNEGPRWVQEWVQHLRLVGEGLGLALLIGAPLAVWATGRERVASAVLGAANAVQTLPSLALLGLLIAP
LAALANAFPGLRTLGISGIGVAPALTALTLYALLPILRNGVVALRGVPTGVVDAARGMGMTPAQLFWRVRLPLALPVWLS
GIRQAAVLLVGVAAVAALIGAGGLGTYIFKGLQSAAADLILLGAVPAALLALGLDAALRGLERLLGQRLGSVQGRVA

Sequences:

>Translated_397_residues
MRVAGQQEASWAVAPATVSGTNTVLMLAMLPMLLGALLPWVLLRPNRLAPGTYLHLPPALVGAALLLAVLPLLTARFTPR
LTWLAAALAVVAGFWWLGSQTRAALLNQLPFARASAASGVWLFLLGAGVAAYGAGLLSRCRAERWLAWAWLPVVTVLFLS
GHLNAWSVLVEGRNEGPRWVQEWVQHLRLVGEGLGLALLIGAPLAVWATGRERVASAVLGAANAVQTLPSLALLGLLIAP
LAALANAFPGLRTLGISGIGVAPALTALTLYALLPILRNGVVALRGVPTGVVDAARGMGMTPAQLFWRVRLPLALPVWLS
GIRQAAVLLVGVAAVAALIGAGGLGTYIFKGLQSAAADLILLGAVPAALLALGLDAALRGLERLLGQRLGSVQGRVA
>Mature_397_residues
MRVAGQQEASWAVAPATVSGTNTVLMLAMLPMLLGALLPWVLLRPNRLAPGTYLHLPPALVGAALLLAVLPLLTARFTPR
LTWLAAALAVVAGFWWLGSQTRAALLNQLPFARASAASGVWLFLLGAGVAAYGAGLLSRCRAERWLAWAWLPVVTVLFLS
GHLNAWSVLVEGRNEGPRWVQEWVQHLRLVGEGLGLALLIGAPLAVWATGRERVASAVLGAANAVQTLPSLALLGLLIAP
LAALANAFPGLRTLGISGIGVAPALTALTLYALLPILRNGVVALRGVPTGVVDAARGMGMTPAQLFWRVRLPLALPVWLS
GIRQAAVLLVGVAAVAALIGAGGLGTYIFKGLQSAAADLILLGAVPAALLALGLDAALRGLERLLGQRLGSVQGRVA

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=369, Percent_Identity=40.9214092140921, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1788449, Length=156, Percent_Identity=35.8974358974359, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789033, Length=188, Percent_Identity=28.7234042553192, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41123; Mature: 41123

Theoretical pI: Translated: 12.23; Mature: 12.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAGQQEASWAVAPATVSGTNTVLMLAMLPMLLGALLPWVLLRPNRLAPGTYLHLPPAL
CCCCCCCCCCCEECCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
VGAALLLAVLPLLTARFTPRLTWLAAALAVVAGFWWLGSQTRAALLNQLPFARASAASGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCH
WLFLLGAGVAAYGAGLLSRCRAERWLAWAWLPVVTVLFLSGHLNAWSVLVEGRNEGPRWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
QEWVQHLRLVGEGLGLALLIGAPLAVWATGRERVASAVLGAANAVQTLPSLALLGLLIAP
HHHHHHHHHHHCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALANAFPGLRTLGISGIGVAPALTALTLYALLPILRNGVVALRGVPTGVVDAARGMGM
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCC
TPAQLFWRVRLPLALPVWLSGIRQAAVLLVGVAAVAALIGAGGLGTYIFKGLQSAAADLI
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLGAVPAALLALGLDAALRGLERLLGQRLGSVQGRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRVAGQQEASWAVAPATVSGTNTVLMLAMLPMLLGALLPWVLLRPNRLAPGTYLHLPPAL
CCCCCCCCCCCEECCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
VGAALLLAVLPLLTARFTPRLTWLAAALAVVAGFWWLGSQTRAALLNQLPFARASAASGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCH
WLFLLGAGVAAYGAGLLSRCRAERWLAWAWLPVVTVLFLSGHLNAWSVLVEGRNEGPRWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
QEWVQHLRLVGEGLGLALLIGAPLAVWATGRERVASAVLGAANAVQTLPSLALLGLLIAP
HHHHHHHHHHHCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALANAFPGLRTLGISGIGVAPALTALTLYALLPILRNGVVALRGVPTGVVDAARGMGM
HHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCC
TPAQLFWRVRLPLALPVWLSGIRQAAVLLVGVAAVAALIGAGGLGTYIFKGLQSAAADLI
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLGAVPAALLALGLDAALRGLERLLGQRLGSVQGRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]