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The map label for this gene is ssb [H]

Identifier: 94984273

GI number: 94984273

Start: 153202

End: 154107

Strand: Reverse

Name: ssb [H]

Synonym: Dgeo_0165

Alternate gene names: 94984273

Gene position: 154107-153202 (Counterclockwise)

Preceding gene: 94984274

Following gene: 94984272

Centisome position: 6.25

GC content: 67.0

Gene sequence:

>906_bases
ATGGCCCGAGGCATGAACCACGTCTTTTTGATCGGCGCCCTCGCTCGCGATCCCGAACTCCGGTACACGCCCAGCGGTGT
GGCTGTTTTTGAAGCCACGGTGGCCGGGGAAGATCACCTGATTGGGAACGATGGCCGCGAGCGCAAACTCCCCTGGTACC
ACCGCGTCTCCCTCCTCGGCAAACCCGCCGAGTGGCAAGCCGAACGCAACCTAAGGGCCGGTGACGCCGTGATGGTGGAA
GGCGGCTTGGAGTACAGCCAGTGGGAAGCGCCGGAAGGCGGCAAACGCAGCATGGTCCGCGTGAAGGCCGGGCGTATCGA
GCAGCTCGGATCTCAGCCCGAACTCGTGCAAGACGCCGGCGGCGGCGTGCGCATGGCAGGCGGCCTGAACGAGGTGATCC
TGATTGGGAACGTCACCCGGGATCCCGAACTGCGCTACACCCCTGCCGGAGACGCCGTGCTCGGACTCGGCTTGGCCGTC
AACGAGAGCTGGCAGGACCGTCAGGGACAGCGGCAGGAGAAGACCCACTGGGTCGACGTGACCCTGTGGCGTGACCTGGC
CGAAGCCATGAAGGATCTGCGCAAGGGCGATCCCGTCCTGGTGCAGGGCAGGCTTGTGAACGAGGCGTGGACCGACCGCG
ACGGCAACAAGCGCAACAGCACCAAAGTAGAGGCGACGCGAGTCGAAGCCCTGTCCCGAGGTGCGGCCACCGGCAGCGCC
GCAGCCACCCCCGCCGCGCCCCGCACGCAGACCGCGGGCAGCACGGCGCGCCCCCAGCCCAGCAGCGTCGGCGTGAGCCG
CACGCAGCCTAGCCGGGCGGCGAATACGGGGACCCGTTCGGGCGGCTTGGATATTGATCAAGGTCTCGATGATTTTCCGC
CGGAAGAAGAAGACCTGCCCTTCTGA

Upstream 100 bases:

>100_bases
TAACAAACTTGGTCTGTTACCGTACGGTCAACCCGCAAGGGCCAACGCCAGCCAGTTCGAAGTTCCAGTTATCTCGCCAG
CAACGAAGGAGAACCCAGTT

Downstream 100 bases:

>100_bases
GCAGGTTTGAGGAACCCCAATGACACAGCAGAGCAACACCGAGCGCAAGCCCCGTGCCAAGGGGCCCAAGCGCCCCAGAA
AGCCAAAGGTTGATCCGTTC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MARGMNHVFLIGALARDPELRYTPSGVAVFEATVAGEDHLIGNDGRERKLPWYHRVSLLGKPAEWQAERNLRAGDAVMVE
GGLEYSQWEAPEGGKRSMVRVKAGRIEQLGSQPELVQDAGGGVRMAGGLNEVILIGNVTRDPELRYTPAGDAVLGLGLAV
NESWQDRQGQRQEKTHWVDVTLWRDLAEAMKDLRKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGAATGSA
AATPAAPRTQTAGSTARPQPSSVGVSRTQPSRAANTGTRSGGLDIDQGLDDFPPEEEDLPF

Sequences:

>Translated_301_residues
MARGMNHVFLIGALARDPELRYTPSGVAVFEATVAGEDHLIGNDGRERKLPWYHRVSLLGKPAEWQAERNLRAGDAVMVE
GGLEYSQWEAPEGGKRSMVRVKAGRIEQLGSQPELVQDAGGGVRMAGGLNEVILIGNVTRDPELRYTPAGDAVLGLGLAV
NESWQDRQGQRQEKTHWVDVTLWRDLAEAMKDLRKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGAATGSA
AATPAAPRTQTAGSTARPQPSSVGVSRTQPSRAANTGTRSGGLDIDQGLDDFPPEEEDLPF
>Mature_300_residues
ARGMNHVFLIGALARDPELRYTPSGVAVFEATVAGEDHLIGNDGRERKLPWYHRVSLLGKPAEWQAERNLRAGDAVMVEG
GLEYSQWEAPEGGKRSMVRVKAGRIEQLGSQPELVQDAGGGVRMAGGLNEVILIGNVTRDPELRYTPAGDAVLGLGLAVN
ESWQDRQGQRQEKTHWVDVTLWRDLAEAMKDLRKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGAATGSAA
ATPAAPRTQTAGSTARPQPSSVGVSRTQPSRAANTGTRSGGLDIDQGLDDFPPEEEDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 SSB domains [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=98, Percent_Identity=46.9387755102041, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 32536; Mature: 32404

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGMNHVFLIGALARDPELRYTPSGVAVFEATVAGEDHLIGNDGRERKLPWYHRVSLLG
CCCCCCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHCC
KPAEWQAERNLRAGDAVMVEGGLEYSQWEAPEGGKRSMVRVKAGRIEQLGSQPELVQDAG
CCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHCC
GGVRMAGGLNEVILIGNVTRDPELRYTPAGDAVLGLGLAVNESWQDRQGQRQEKTHWVDV
CCEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEECEEECCCHHHHCCCCHHCCEEEEH
TLWRDLAEAMKDLRKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGAATGSA
HHHHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AATPAAPRTQTAGSTARPQPSSVGVSRTQPSRAANTGTRSGGLDIDQGLDDFPPEEEDLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure 
ARGMNHVFLIGALARDPELRYTPSGVAVFEATVAGEDHLIGNDGRERKLPWYHRVSLLG
CCCCCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHCC
KPAEWQAERNLRAGDAVMVEGGLEYSQWEAPEGGKRSMVRVKAGRIEQLGSQPELVQDAG
CCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHCC
GGVRMAGGLNEVILIGNVTRDPELRYTPAGDAVLGLGLAVNESWQDRQGQRQEKTHWVDV
CCEEEECCCCEEEEEECCCCCCCEEECCCCCCEEEECEEECCCHHHHCCCCHHCCEEEEH
TLWRDLAEAMKDLRKGDPVLVQGRLVNEAWTDRDGNKRNSTKVEATRVEALSRGAATGSA
HHHHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
AATPAAPRTQTAGSTARPQPSSVGVSRTQPSRAANTGTRSGGLDIDQGLDDFPPEEEDLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]