| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is sseA [H]
Identifier: 94984267
GI number: 94984267
Start: 147985
End: 148863
Strand: Reverse
Name: sseA [H]
Synonym: Dgeo_0159
Alternate gene names: 94984267
Gene position: 148863-147985 (Counterclockwise)
Preceding gene: 94984269
Following gene: 94984265
Centisome position: 6.03
GC content: 70.19
Gene sequence:
>879_bases ATGACCGCCACCGAATCACCGCTGAAGTCCGCCGAGTGGTTGCTCGCGCACCTGAATGATCCGCAGGTACGGGTGCTGGA CTGCCGCTACGCCCTGACTGACCCACTGCTGGGGCGCATCGCCTACCTGGAGGGACATATCCCGGGCGCGATCTACGCCG ACCTGGAGACCGACCTCAGCGGGCCGGTGCGGCCCGACGGCGCGGGAGGTCGCCACCCCCTGCCCGACCCGGCGACCCTG GCGGCCTGGCTGGGCCGCGTAGGCATCGGGAATGACAGTGTGGTGGTTGCCTACGACGATCCGCGGGGCGGCCAAGGCTT CTACGCCACGCGGGCCTGGTGGTTGCTGCGCTGGCTGGGACACCAGCAGGTCTATGTGCTGGATGGAGGCTGGCCCGCTT TCCTGGCAGCGGGCGGGCAGCCCAGCACCGCCGAGCCGGAGTTTGCCCCCACGACCTTCCGGCCCGATGTGCAGATGGAC ATGGTGGCCACCGCTGAGGACGTGGCGGGACGGGACGCGCACACCCTGCTGATCGACGCGCGTGCCCCGAACCGTTACCG CGGCGAGGTGGAGCCCCTCGACCGCAAAGCCGGGCATATCCCGGGCGCCGTGAACCGCGAGTGGGCCGGAGCGCTGGACG AGAGCGGCCACTGGCGGGAGGCTCAGGCCCAAGCCGCACGGCTCAAGGCCGGCGACGCGCCGACCATCACCTACTGCGGC AGCGGCGTGAGTGCCACGCCCAACCTGCTTGCTCGCGAGCTTGCCGGAGTGCCGCTGGGCCCACAAAATCGTCTGTACGC CGGGTCGTGGAGCGACTGGATCAGTGATGACGCGCGGCCGGTGGCAACGGGAGAGGAACCTGGCAGCCGTAAACCGTGA
Upstream 100 bases:
>100_bases AGACTGCCCCCGCACGGGGCTGGCCGTGCCTGTAGCGCCTGAGGTGCGGGAGGTGACGGGTGACGCCACCGTACCGCCTG CTGCCGTGTAGCCTGCGGGC
Downstream 100 bases:
>100_bases GCGCGGCCCTAGCGCGTTCCTCCGTACCCTCCCGAGCAGGGTGCGCCGCGCTCAGGGGCCGTCTCGCCCTGCCCGTACCG GTCAAGAAACGCCTTGAGGC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTATESPLKSAEWLLAHLNDPQVRVLDCRYALTDPLLGRIAYLEGHIPGAIYADLETDLSGPVRPDGAGGRHPLPDPATL AAWLGRVGIGNDSVVVAYDDPRGGQGFYATRAWWLLRWLGHQQVYVLDGGWPAFLAAGGQPSTAEPEFAPTTFRPDVQMD MVATAEDVAGRDAHTLLIDARAPNRYRGEVEPLDRKAGHIPGAVNREWAGALDESGHWREAQAQAARLKAGDAPTITYCG SGVSATPNLLARELAGVPLGPQNRLYAGSWSDWISDDARPVATGEEPGSRKP
Sequences:
>Translated_292_residues MTATESPLKSAEWLLAHLNDPQVRVLDCRYALTDPLLGRIAYLEGHIPGAIYADLETDLSGPVRPDGAGGRHPLPDPATL AAWLGRVGIGNDSVVVAYDDPRGGQGFYATRAWWLLRWLGHQQVYVLDGGWPAFLAAGGQPSTAEPEFAPTTFRPDVQMD MVATAEDVAGRDAHTLLIDARAPNRYRGEVEPLDRKAGHIPGAVNREWAGALDESGHWREAQAQAARLKAGDAPTITYCG SGVSATPNLLARELAGVPLGPQNRLYAGSWSDWISDDARPVATGEEPGSRKP >Mature_291_residues TATESPLKSAEWLLAHLNDPQVRVLDCRYALTDPLLGRIAYLEGHIPGAIYADLETDLSGPVRPDGAGGRHPLPDPATLA AWLGRVGIGNDSVVVAYDDPRGGQGFYATRAWWLLRWLGHQQVYVLDGGWPAFLAAGGQPSTAEPEFAPTTFRPDVQMDM VATAEDVAGRDAHTLLIDARAPNRYRGEVEPLDRKAGHIPGAVNREWAGALDESGHWREAQAQAARLKAGDAPTITYCGS GVSATPNLLARELAGVPLGPQNRLYAGSWSDWISDDARPVATGEEPGSRKP
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=281, Percent_Identity=33.8078291814947, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI194473668, Length=284, Percent_Identity=34.5070422535211, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI61835204, Length=284, Percent_Identity=34.5070422535211, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI194473681, Length=284, Percent_Identity=34.5070422535211, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI87082121, Length=277, Percent_Identity=33.9350180505415, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71997283, Length=309, Percent_Identity=25.8899676375405, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17561888, Length=291, Percent_Identity=24.7422680412371, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31354; Mature: 31223
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATESPLKSAEWLLAHLNDPQVRVLDCRYALTDPLLGRIAYLEGHIPGAIYADLETDLS CCCCCCCHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHHHEECCCCCCEEEEECCCCCC GPVRPDGAGGRHPLPDPATLAAWLGRVGIGNDSVVVAYDDPRGGQGFYATRAWWLLRWLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC HQQVYVLDGGWPAFLAAGGQPSTAEPEFAPTTFRPDVQMDMVATAEDVAGRDAHTLLIDA CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHEECHHHHCCCCCEEEEEEC RAPNRYRGEVEPLDRKAGHIPGAVNREWAGALDESGHWREAQAQAARLKAGDAPTITYCG CCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC SGVSATPNLLARELAGVPLGPQNRLYAGSWSDWISDDARPVATGEEPGSRKP CCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TATESPLKSAEWLLAHLNDPQVRVLDCRYALTDPLLGRIAYLEGHIPGAIYADLETDLS CCCCCCHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHHHEECCCCCCEEEEECCCCCC GPVRPDGAGGRHPLPDPATLAAWLGRVGIGNDSVVVAYDDPRGGQGFYATRAWWLLRWLG CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC HQQVYVLDGGWPAFLAAGGQPSTAEPEFAPTTFRPDVQMDMVATAEDVAGRDAHTLLIDA CCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHEECHHHHCCCCCEEEEEEC RAPNRYRGEVEPLDRKAGHIPGAVNREWAGALDESGHWREAQAQAARLKAGDAPTITYCG CCCCCCCCCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC SGVSATPNLLARELAGVPLGPQNRLYAGSWSDWISDDARPVATGEEPGSRKP CCCCCCHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]