| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yjiB [H]
Identifier: 94984251
GI number: 94984251
Start: 132759
End: 133982
Strand: Reverse
Name: yjiB [H]
Synonym: Dgeo_0143
Alternate gene names: 94984251
Gene position: 133982-132759 (Counterclockwise)
Preceding gene: 94984256
Following gene: 94984248
Centisome position: 5.43
GC content: 66.5
Gene sequence:
>1224_bases ATGACCACTTCCGAAGCCCCACAATGCCCCTACCATCTCAAACAGTCTCTCACCCGCCGGCCCACCGCTGGCGCCCGGCC GAGTGCGGCCATCGAGGTGGACGGAAACGGCATTTACCGCATTCACGCCTTTCAGGCGGCCCGCGACATCCTGCGTTCGA ACAGCGTGCGGCAGGCGGGCTTCATGTCGGAGAGCGCCCGGGGCGTGCGGGGTTTGGGCAACCCGCCCGTGCTGTTCGAG GAGGGCGAAAAGCACCACGAGATGCGCCGCTCGACGGCCCGCTACTTCACACCCACCCAGGTCGCGGAGTACCAGCCCAT GATCGCCGCGCTCGCCGACGACCTGATTGCAGAACTCATTCGCCGGGGCGAGATGAACCTCGATGACCTCAGCCTGAGGC TGGCGGTGAATGTGGCCGCGCGGGTGGTGGGCCTTACCAGCAGCCGCGTGCCGGGGCTAGAGCGGCGCGTCATCTCCTTT GTGGAGAGCGGCGGCGACAGCGAACCGAGCAGCACCCAGCCCAGGAAAAGCCGACTGGAAAGCCTGCGGCAACAGGCCAA GATGGCCCTCTTCTACTTCCTCGACGTCAAACCCGCCATCGCAGCCAGACGCCAACAACGCCAAGACGACCTGATCAGCC ACCTGCTCGACCGCGAATACAACGACCTCGAGATCTTGACCGAGTGCCTGACCTACGGCACGGCGGGTATGGTCACCACC CGCGAGTTCATCAGCGTGGCGGCCTGGCACCTGCTCAGAAATCCGGGGCTGCGCGCCGAATATGTCCACGGCACCGAGCC GGAACGCCACGCCATCCTGCACGAGATTCTGCGTCTGGAACCGGTGGTGACCATGCTCTACCGCCGCGCCGAAGGAGAGC TGACGGTGGCCGGTCAGACCATCCCCGCAGGGAGCCTGCTGGCCCTCCACCTTCAGGAGGCCAACACGGATCCAGCAGTG GCGGGCGCGGATGCCGAGCAGCTCTGCCCAGGCCGCACCTTGCCGCGCGGCGTAGCGCCACAGGTGCTGGCCTTTGGTGA CGGTCACCACCGTTGCCCCGGTGCCTTCCTGGCCATCAAGGAATCGGACGTGTTCCTGCGGCGCTTGCTCGTGTGGCAGG ACCTGGAGATCGTCTCCGAACCCGAGGTGAACTCCAACGAGGTCGTCAAGGGCTACGAGCTGCGCGGCTTTCGGGTGCGC TTGGGGCGGGCGGCCCGGCCCTGA
Upstream 100 bases:
>100_bases GCTTGACCCGCATGCGCTTCTCGGACCCACGGCTGCTCTCACCCGCGCCCTGTTCACGGTTGGCACAAGTCGCTCGTTCT CTGCCCTTTCAGGAGTCCAC
Downstream 100 bases:
>100_bases ACGGCCTGCCGCCGCGGTGGGGTCCCGTCACATCCCCTTGTCATCTGTGCCGGTCGTGCCAAAGGTCGTCCCCGTTGAGG TGCCGTCGTTCGTCTCGCCG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTTSEAPQCPYHLKQSLTRRPTAGARPSAAIEVDGNGIYRIHAFQAARDILRSNSVRQAGFMSESARGVRGLGNPPVLFE EGEKHHEMRRSTARYFTPTQVAEYQPMIAALADDLIAELIRRGEMNLDDLSLRLAVNVAARVVGLTSSRVPGLERRVISF VESGGDSEPSSTQPRKSRLESLRQQAKMALFYFLDVKPAIAARRQQRQDDLISHLLDREYNDLEILTECLTYGTAGMVTT REFISVAAWHLLRNPGLRAEYVHGTEPERHAILHEILRLEPVVTMLYRRAEGELTVAGQTIPAGSLLALHLQEANTDPAV AGADAEQLCPGRTLPRGVAPQVLAFGDGHHRCPGAFLAIKESDVFLRRLLVWQDLEIVSEPEVNSNEVVKGYELRGFRVR LGRAARP
Sequences:
>Translated_407_residues MTTSEAPQCPYHLKQSLTRRPTAGARPSAAIEVDGNGIYRIHAFQAARDILRSNSVRQAGFMSESARGVRGLGNPPVLFE EGEKHHEMRRSTARYFTPTQVAEYQPMIAALADDLIAELIRRGEMNLDDLSLRLAVNVAARVVGLTSSRVPGLERRVISF VESGGDSEPSSTQPRKSRLESLRQQAKMALFYFLDVKPAIAARRQQRQDDLISHLLDREYNDLEILTECLTYGTAGMVTT REFISVAAWHLLRNPGLRAEYVHGTEPERHAILHEILRLEPVVTMLYRRAEGELTVAGQTIPAGSLLALHLQEANTDPAV AGADAEQLCPGRTLPRGVAPQVLAFGDGHHRCPGAFLAIKESDVFLRRLLVWQDLEIVSEPEVNSNEVVKGYELRGFRVR LGRAARP >Mature_406_residues TTSEAPQCPYHLKQSLTRRPTAGARPSAAIEVDGNGIYRIHAFQAARDILRSNSVRQAGFMSESARGVRGLGNPPVLFEE GEKHHEMRRSTARYFTPTQVAEYQPMIAALADDLIAELIRRGEMNLDDLSLRLAVNVAARVVGLTSSRVPGLERRVISFV ESGGDSEPSSTQPRKSRLESLRQQAKMALFYFLDVKPAIAARRQQRQDDLISHLLDREYNDLEILTECLTYGTAGMVTTR EFISVAAWHLLRNPGLRAEYVHGTEPERHAILHEILRLEPVVTMLYRRAEGELTVAGQTIPAGSLLALHLQEANTDPAVA GADAEQLCPGRTLPRGVAPQVLAFGDGHHRCPGAFLAIKESDVFLRRLLVWQDLEIVSEPEVNSNEVVKGYELRGFRVRL GRAARP
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45178; Mature: 45047
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSEAPQCPYHLKQSLTRRPTAGARPSAAIEVDGNGIYRIHAFQAARDILRSNSVRQAG CCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCHHHHH FMSESARGVRGLGNPPVLFEEGEKHHEMRRSTARYFTPTQVAEYQPMIAALADDLIAELI CHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RRGEMNLDDLSLRLAVNVAARVVGLTSSRVPGLERRVISFVESGGDSEPSSTQPRKSRLE HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH SLRQQAKMALFYFLDVKPAIAARRQQRQDDLISHLLDREYNDLEILTECLTYGTAGMVTT HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH REFISVAAWHLLRNPGLRAEYVHGTEPERHAILHEILRLEPVVTMLYRRAEGELTVAGQT HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC IPAGSLLALHLQEANTDPAVAGADAEQLCPGRTLPRGVAPQVLAFGDGHHRCPGAFLAIK CCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE ESDVFLRRLLVWQDLEIVSEPEVNSNEVVKGYELRGFRVRLGRAARP CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCEEEECCCCCCC >Mature Secondary Structure TTSEAPQCPYHLKQSLTRRPTAGARPSAAIEVDGNGIYRIHAFQAARDILRSNSVRQAG CCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHCCCHHHHH FMSESARGVRGLGNPPVLFEEGEKHHEMRRSTARYFTPTQVAEYQPMIAALADDLIAELI CHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RRGEMNLDDLSLRLAVNVAARVVGLTSSRVPGLERRVISFVESGGDSEPSSTQPRKSRLE HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH SLRQQAKMALFYFLDVKPAIAARRQQRQDDLISHLLDREYNDLEILTECLTYGTAGMVTT HHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH REFISVAAWHLLRNPGLRAEYVHGTEPERHAILHEILRLEPVVTMLYRRAEGELTVAGQT HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC IPAGSLLALHLQEANTDPAVAGADAEQLCPGRTLPRGVAPQVLAFGDGHHRCPGAFLAIK CCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE ESDVFLRRLLVWQDLEIVSEPEVNSNEVVKGYELRGFRVRLGRAARP CHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]