| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984241
Identifier: 94984241
GI number: 94984241
Start: 121896
End: 122510
Strand: Reverse
Name: 94984241
Synonym: Dgeo_0133
Alternate gene names: NA
Gene position: 122510-121896 (Counterclockwise)
Preceding gene: 94984242
Following gene: 94984240
Centisome position: 4.97
GC content: 69.76
Gene sequence:
>615_bases ATGATCGCCGAGCCGCCCAACCTCCGGCACCCGCTGGCCGAACTGGCCGGCTGGGAAGAACGGGTGCGGCTGATGGTCCG TCCGCGCCGCTTTGAACACGTGCTGCGGGTGGCCGAACTTGCCTGTCAGATCGCGCGCGCCAACGGTCTGGACGAGGCAC GGGCCTATGCCGCAGGGCTGCTGCACGACATCGCCCGCGACTTGCCGGACGCCGAGCTGCTGCGCCTTGCGCCGCCCGAG TGTGCGATTGACGCCGCGCATCCGCTCGCGCTGCATGGCCGGGCCGCCCGCACGCTGCTCGAGCGCTGGGGCTACAGTGA TTCGGTGGTGCTTGAAGCCGTCGAGGACCATACCACCGGCCCGCGCGGTGGCAATCCGGTGGCGGCCTGTGTCTATGTCG CAGACGTGTCCGAACCTGGGCGCGGCGTGAACGAGGACATCCGTGAGCTGGCGCTGCGCGACCTGAACGCCGCCCTCAAC CGCGCCATCGTTTCCAAAGTGACCTACCTCCAGGGGCGCGGCATTCAGGTGCATCCCCGCACCTTGCTCGCCTATCATGC CCTGCCGTGCGTCACGCCGGCTGCCGCGGCCCCTGACTCTCCCCTGCCGCCATGA
Upstream 100 bases:
>100_bases GGAGCAGCCTGGGTGGATCAAACTGGAAGGCATCTCAAGCTGAGAGGCGCTGCTGGGCGTATACTGAGGCCATGGTGTGG CGCATGACCCACGTGGCCGT
Downstream 100 bases:
>100_bases CTGTTGCTCCTCGCCCTCCCCACAACCCTGGCCTTTCTCCCCGCCGCCGGTCCCGCCTGCGCGCGGTGCAGTTCTTTGGC CTGAGCCTGGCAGCCCTCAC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIAEPPNLRHPLAELAGWEERVRLMVRPRRFEHVLRVAELACQIARANGLDEARAYAAGLLHDIARDLPDAELLRLAPPE CAIDAAHPLALHGRAARTLLERWGYSDSVVLEAVEDHTTGPRGGNPVAACVYVADVSEPGRGVNEDIRELALRDLNAALN RAIVSKVTYLQGRGIQVHPRTLLAYHALPCVTPAAAAPDSPLPP
Sequences:
>Translated_204_residues MIAEPPNLRHPLAELAGWEERVRLMVRPRRFEHVLRVAELACQIARANGLDEARAYAAGLLHDIARDLPDAELLRLAPPE CAIDAAHPLALHGRAARTLLERWGYSDSVVLEAVEDHTTGPRGGNPVAACVYVADVSEPGRGVNEDIRELALRDLNAALN RAIVSKVTYLQGRGIQVHPRTLLAYHALPCVTPAAAAPDSPLPP >Mature_204_residues MIAEPPNLRHPLAELAGWEERVRLMVRPRRFEHVLRVAELACQIARANGLDEARAYAAGLLHDIARDLPDAELLRLAPPE CAIDAAHPLALHGRAARTLLERWGYSDSVVLEAVEDHTTGPRGGNPVAACVYVADVSEPGRGVNEDIRELALRDLNAALN RAIVSKVTYLQGRGIQVHPRTLLAYHALPCVTPAAAAPDSPLPP
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005249 - InterPro: IPR004820 - InterPro: IPR003607 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 22131; Mature: 22131
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEPPNLRHPLAELAGWEERVRLMVRPRRFEHVLRVAELACQIARANGLDEARAYAAGL CCCCCCCCCCHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LHDIARDLPDAELLRLAPPECAIDAAHPLALHGRAARTLLERWGYSDSVVLEAVEDHTTG HHHHHHHCCCHHHHHCCCCCHHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCC PRGGNPVAACVYVADVSEPGRGVNEDIRELALRDLNAALNRAIVSKVTYLQGRGIQVHPR CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHH TLLAYHALPCVTPAAAAPDSPLPP HHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIAEPPNLRHPLAELAGWEERVRLMVRPRRFEHVLRVAELACQIARANGLDEARAYAAGL CCCCCCCCCCHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LHDIARDLPDAELLRLAPPECAIDAAHPLALHGRAARTLLERWGYSDSVVLEAVEDHTTG HHHHHHHCCCHHHHHCCCCCHHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCC PRGGNPVAACVYVADVSEPGRGVNEDIRELALRDLNAALNRAIVSKVTYLQGRGIQVHPR CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHH TLLAYHALPCVTPAAAAPDSPLPP HHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]