| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is chrA1 [H]
Identifier: 94984228
GI number: 94984228
Start: 110479
End: 111642
Strand: Reverse
Name: chrA1 [H]
Synonym: Dgeo_0120
Alternate gene names: 94984228
Gene position: 111642-110479 (Counterclockwise)
Preceding gene: 94984229
Following gene: 94984225
Centisome position: 4.53
GC content: 68.21
Gene sequence:
>1164_bases GTGGCTGCTCGAGAAGTCTTCCTGGTGTTTCTGCGCCTGGGCCTGACCAGTTTTGGGGGGCCGGTGGCACACCTGGGCTT TTTCCGGCACGAGCTGGTCGAGCGGCGGCGCTGGCTCAGCGAAAGCGGGTACGCGGACGTTGTGGCGCTGGCCCAGTTTC TCCCGGGTCCAACCAGCAGCCAAGTGGGCATGACGCTGGGACTGCTGCGGGGCGGGTGGCCTGGCCTGCTCGCCGCGTGG TTGGGCTTTACACTCCCCAGCGCCCTGCTGATGTTCGCCTTTGCGCTGGGCATAACGCGTCTGGGAAATGTGACGGATGC AGGGTGGCTCTTGGGACTCAAGGTTGCGGCGGCCGCGGTCGTTGCACAGGCAGTCGCGGGGATGTGGGGAAGCCTGGTGG GAACGGACCGGCTGCGGGTAGCCCTGGCGCTGGGGGTGGCTGCGGCCCTGCTGCTGCTGCCTGGGGCGGGCGCCCAGGTA CTGGCTCTTGCCCTGTGCGCCCTCATCGGCTGGCGCCTCCTTCCCCCGGGGGAGCGCGGGACCGGTCACCTGCCGCGTGT GCCCGTTTCCCAACCGGTGGCAACCGTCCTGCTGCTGACCTGTGGACTCGGACTGTTCACGTTGCCTCTTCTCGCGCCCC TAGCCCCAGAGTGGGCGTTGCTGAACGCCACTTTCCGTGCGGGGGCGCTGGTGTTCGGGGGCGGACACGTGGTGCTGCCG CTGCTCGAAGCGGGCTTCGTTCCCCAGTTCCTCCCGCACGAGACGTTCGTAGCCGGATATGGGGCGGCCAACGCCCTGCC GGGACCACTGTTTACCTTCGCCAGCTATTTGGGGGCGGCGCAAAGAACGCTTCCGGCCTGGCAGGGGGCCATCATTGCCA CACTGGGTGTGTTCTTGCCGGGTGCACTGCTGATCTCGGGAGCGCTGCCCTTCTGGGCAAGGTTCGCGGCGCTTCCAGCC GCCCGCTCCGCGCTGGCCGGGCTGAATGCAGGGGTGGTGGGCCTGCTGCTTGCGGCTCTGTATACACCTGTCTTCACGTC AAGTATTCACAGTCCCGCAGAGGCAGCCTTAGCCCTGCTCGCCTACGCCGCCCTCACTGCCGGGCGCTGGCCCGCGTGGG CAGTGGTGGGGGCGTGCGTGGCCCTGGGAGCTGTGCTGCTTTAG
Upstream 100 bases:
>100_bases CGACGACTGAGAGCCGACCGCACAGAAGGCGCTTGCCAAAGCAGGTGCCTTTCCTTTTTTGTTCCATAAGATAAGCTTTT GTTCCATAAGATAAGCGCGG
Downstream 100 bases:
>100_bases CGGCTCGTTTCTCCTTCTAGCCCGTAAATCTCCAGAAAGCGCTGCACCCGCGCCTCCAGTGTGGGCAATGGGGCCACCTC GCCGCAGACCCAGTCGGGCT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MAAREVFLVFLRLGLTSFGGPVAHLGFFRHELVERRRWLSESGYADVVALAQFLPGPTSSQVGMTLGLLRGGWPGLLAAW LGFTLPSALLMFAFALGITRLGNVTDAGWLLGLKVAAAAVVAQAVAGMWGSLVGTDRLRVALALGVAAALLLLPGAGAQV LALALCALIGWRLLPPGERGTGHLPRVPVSQPVATVLLLTCGLGLFTLPLLAPLAPEWALLNATFRAGALVFGGGHVVLP LLEAGFVPQFLPHETFVAGYGAANALPGPLFTFASYLGAAQRTLPAWQGAIIATLGVFLPGALLISGALPFWARFAALPA ARSALAGLNAGVVGLLLAALYTPVFTSSIHSPAEAALALLAYAALTAGRWPAWAVVGACVALGAVLL
Sequences:
>Translated_387_residues MAAREVFLVFLRLGLTSFGGPVAHLGFFRHELVERRRWLSESGYADVVALAQFLPGPTSSQVGMTLGLLRGGWPGLLAAW LGFTLPSALLMFAFALGITRLGNVTDAGWLLGLKVAAAAVVAQAVAGMWGSLVGTDRLRVALALGVAAALLLLPGAGAQV LALALCALIGWRLLPPGERGTGHLPRVPVSQPVATVLLLTCGLGLFTLPLLAPLAPEWALLNATFRAGALVFGGGHVVLP LLEAGFVPQFLPHETFVAGYGAANALPGPLFTFASYLGAAQRTLPAWQGAIIATLGVFLPGALLISGALPFWARFAALPA ARSALAGLNAGVVGLLLAALYTPVFTSSIHSPAEAALALLAYAALTAGRWPAWAVVGACVALGAVLL >Mature_386_residues AAREVFLVFLRLGLTSFGGPVAHLGFFRHELVERRRWLSESGYADVVALAQFLPGPTSSQVGMTLGLLRGGWPGLLAAWL GFTLPSALLMFAFALGITRLGNVTDAGWLLGLKVAAAAVVAQAVAGMWGSLVGTDRLRVALALGVAAALLLLPGAGAQVL ALALCALIGWRLLPPGERGTGHLPRVPVSQPVATVLLLTCGLGLFTLPLLAPLAPEWALLNATFRAGALVFGGGHVVLPL LEAGFVPQFLPHETFVAGYGAANALPGPLFTFASYLGAAQRTLPAWQGAIIATLGVFLPGALLISGALPFWARFAALPAA RSALAGLNAGVVGLLLAALYTPVFTSSIHSPAEAALALLAYAALTAGRWPAWAVVGACVALGAVLL
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 39687; Mature: 39555
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAREVFLVFLRLGLTSFGGPVAHLGFFRHELVERRRWLSESGYADVVALAQFLPGPTSS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC QVGMTLGLLRGGWPGLLAAWLGFTLPSALLMFAFALGITRLGNVTDAGWLLGLKVAAAAV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAQAVAGMWGSLVGTDRLRVALALGVAAALLLLPGAGAQVLALALCALIGWRLLPPGERG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC TGHLPRVPVSQPVATVLLLTCGLGLFTLPLLAPLAPEWALLNATFRAGALVFGGGHVVLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCHHHHH LLEAGFVPQFLPHETFVAGYGAANALPGPLFTFASYLGAAQRTLPAWQGAIIATLGVFLP HHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALLISGALPFWARFAALPAARSALAGLNAGVVGLLLAALYTPVFTSSIHSPAEAALALL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AYAALTAGRWPAWAVVGACVALGAVLL HHHHHHCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure AAREVFLVFLRLGLTSFGGPVAHLGFFRHELVERRRWLSESGYADVVALAQFLPGPTSS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC QVGMTLGLLRGGWPGLLAAWLGFTLPSALLMFAFALGITRLGNVTDAGWLLGLKVAAAAV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAQAVAGMWGSLVGTDRLRVALALGVAAALLLLPGAGAQVLALALCALIGWRLLPPGERG HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC TGHLPRVPVSQPVATVLLLTCGLGLFTLPLLAPLAPEWALLNATFRAGALVFGGGHVVLP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEECCCHHHHH LLEAGFVPQFLPHETFVAGYGAANALPGPLFTFASYLGAAQRTLPAWQGAIIATLGVFLP HHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALLISGALPFWARFAALPAARSALAGLNAGVVGLLLAALYTPVFTSSIHSPAEAALALL HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AYAALTAGRWPAWAVVGACVALGAVLL HHHHHHCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]