Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94984137

Identifier: 94984137

GI number: 94984137

Start: 27484

End: 27840

Strand: Reverse

Name: 94984137

Synonym: Dgeo_0029

Alternate gene names: NA

Gene position: 27840-27484 (Counterclockwise)

Preceding gene: 94984138

Following gene: 94984136

Centisome position: 1.13

GC content: 67.51

Gene sequence:

>357_bases
ATGCCCCGACCTCTCCCCCTTCCCTTCCCGGACGAGACCGAAGCTCCGCTGGTGACGGAGCTGCGCTTTCCGAGCAGCGG
CGTGACCGTGCGCGGCGTCTTCGAGCTGAATGAGTTCGCGACCCTGACGCCCGAGAACCTGGAGTTCCTGCGGCTGTATA
TCCGCGTGCGCGGCAATCTGAAGGAGGTCGAGCGGGTGCTGGGCCTCAGCTACCCCACCGTCCGCGCCCGCTTCGACATG
CTGCTACGCGCCATCGGGTATGAGGCCGAACTGGCCGACCCCCAGGCGGAAGTCCTGGAACGCCTGGAACGCGGCGAGAT
CACCCCGGATGAGGCGGCCAGAAAGCTGCGGCGCTAG

Upstream 100 bases:

>100_bases
GCTCGGGCAACAGTGTGCGGATCAGCCTGAAATGAAGGAGGCCGAGGACGGCTGGCACCTTGAAGCCCCCGGCCCTCTGC
TCGCTGCGTAGAGTGACTCC

Downstream 100 bases:

>100_bases
CCTCACCACACGCCCAAGCGGCCGGCATGCCCTTTGCCGCTCCACCCTCAGAGCGGCCAGAAGGGCAGGGGAACAGTGGA
GCTGCTGTCAAGCAACGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator Fis Family

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPRPLPLPFPDETEAPLVTELRFPSSGVTVRGVFELNEFATLTPENLEFLRLYIRVRGNLKEVERVLGLSYPTVRARFDM
LLRAIGYEAELADPQAEVLERLERGEITPDEAARKLRR

Sequences:

>Translated_118_residues
MPRPLPLPFPDETEAPLVTELRFPSSGVTVRGVFELNEFATLTPENLEFLRLYIRVRGNLKEVERVLGLSYPTVRARFDM
LLRAIGYEAELADPQAEVLERLERGEITPDEAARKLRR
>Mature_117_residues
PRPLPLPFPDETEAPLVTELRFPSSGVTVRGVFELNEFATLTPENLEFLRLYIRVRGNLKEVERVLGLSYPTVRARFDML
LRAIGYEAELADPQAEVLERLERGEITPDEAARKLRR

Specific function: Unknown

COG id: COG3877

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13537; Mature: 13406

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPLPLPFPDETEAPLVTELRFPSSGVTVRGVFELNEFATLTPENLEFLRLYIRVRGNL
CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCH
KEVERVLGLSYPTVRARFDMLLRAIGYEAELADPQAEVLERLERGEITPDEAARKLRR
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PRPLPLPFPDETEAPLVTELRFPSSGVTVRGVFELNEFATLTPENLEFLRLYIRVRGNL
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCH
KEVERVLGLSYPTVRARFDMLLRAIGYEAELADPQAEVLERLERGEITPDEAARKLRR
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA