| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972146
Identifier: 94972146
GI number: 94972146
Start: 349772
End: 350575
Strand: Direct
Name: 94972146
Synonym: Dgeo_2679
Alternate gene names: NA
Gene position: 349772-350575 (Clockwise)
Preceding gene: 94972147
Following gene: 94972145
Centisome position: 60.92
GC content: 68.03
Gene sequence:
>804_bases ATGATGCTCGCCTGGCTCGGCGCGGTGCTGATCGGCCTCTCGCTCGGCCTGCTGGGATCGGGTGGCTCCATCCTGACGGT GCCGGTCCTGGTCTACCTCGCCGGGGAGGATCCCAAGCTCGCCGTCGCAGAAAGCCTCGCCATCGTCGGTGTGATCGCCC TGTTCGGCGCGCTGCCCTACGCCCGCCGGGGGTGCGTGCAGTGGCGCAGCGTGGGGCTGTTTGGAACGCCCGGGGTCGTT GGCACCGTCCTGGGAAGCCTCCTGAGTCACCGGCTCCCCGCCGCGCTGCAACTGCTGATCTTTGCCGCCGTGATGCTGAC TGCCGCCGTGCGGATGTTCCGCCCTATGGCCACCCCCGACGCAGGCTGCGCGCGCCCCAGCTGGCAGGTGATCCTCACTG GCCTCGGCGTCGGCGTGTTGACCGGCGTGGTCGGGGTGGGTGGGGGCTTCCTGATCCTCCCGGCGCTGGTGCTGCTGCTC GGCCTGCCCATGCCGCAGGCTGTGGGGACCAGCCTGGTGATCATCGCCCTCAATTCTGCCTTCGGGTTTGCCGCCCACCT TCCGCAGTTCGGGAGCCACCTGCACTGGGGCATCATTGCCCTGTTGGGCAGCATCGGCGTGCTGGGCAGCTTCCTCGGCG AGTCCCTGTCCAAGTTTTGTTCGCCCCTCACCTTGCGGCGCGCGTTCGCTGCTTTTCTGGTGGTGCTTGGCGGGTACATC CTCGTCAGCAACCTGCCTCAGGCTGTGGGCCAATGGCAACAAGCCCGCATTCCCAGCGCCGTGCACGCTGTCAAATACCC CTGA
Upstream 100 bases:
>100_bases CCTATCTCGCCGCTCAAGGCAAAACAGGACTGATGAATCTCTCGGGCGGCACGGCGGCTTGGCTGCGCGAAGGCCGCGCA GTGAGCCAGGGCGAGCGGCC
Downstream 100 bases:
>100_bases TATGACCGAACTGTTCGATTTCCTCCGCTCGCCCTGGCCCTGGTATGTGGGCGGCCCCCTGATTGGCCTGACTGTGCCGC TGCTGCTGTGGCTGGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MMLAWLGAVLIGLSLGLLGSGGSILTVPVLVYLAGEDPKLAVAESLAIVGVIALFGALPYARRGCVQWRSVGLFGTPGVV GTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPDAGCARPSWQVILTGLGVGVLTGVVGVGGGFLILPALVLLL GLPMPQAVGTSLVIIALNSAFGFAAHLPQFGSHLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLGGYI LVSNLPQAVGQWQQARIPSAVHAVKYP
Sequences:
>Translated_267_residues MMLAWLGAVLIGLSLGLLGSGGSILTVPVLVYLAGEDPKLAVAESLAIVGVIALFGALPYARRGCVQWRSVGLFGTPGVV GTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPDAGCARPSWQVILTGLGVGVLTGVVGVGGGFLILPALVLLL GLPMPQAVGTSLVIIALNSAFGFAAHLPQFGSHLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLGGYI LVSNLPQAVGQWQQARIPSAVHAVKYP >Mature_267_residues MMLAWLGAVLIGLSLGLLGSGGSILTVPVLVYLAGEDPKLAVAESLAIVGVIALFGALPYARRGCVQWRSVGLFGTPGVV GTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPDAGCARPSWQVILTGLGVGVLTGVVGVGGGFLILPALVLLL GLPMPQAVGTSLVIIALNSAFGFAAHLPQFGSHLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLGGYI LVSNLPQAVGQWQQARIPSAVHAVKYP
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27445; Mature: 27445
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLAWLGAVLIGLSLGLLGSGGSILTVPVLVYLAGEDPKLAVAESLAIVGVIALFGALPY CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHH ARRGCVQWRSVGLFGTPGVVGTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGCARPSWQVILTGLGVGVLTGVVGVGGGFLILPALVLLLGLPMPQAVGTSLVIIALNSA CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCH FGFAAHLPQFGSHLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLGGYI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSNLPQAVGQWQQARIPSAVHAVKYP HHHHHHHHHCCHHHHCCCHHHHHCCCC >Mature Secondary Structure MMLAWLGAVLIGLSLGLLGSGGSILTVPVLVYLAGEDPKLAVAESLAIVGVIALFGALPY CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHH ARRGCVQWRSVGLFGTPGVVGTVLGSLLSHRLPAALQLLIFAAVMLTAAVRMFRPMATPD HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGCARPSWQVILTGLGVGVLTGVVGVGGGFLILPALVLLLGLPMPQAVGTSLVIIALNSA CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEEECCH FGFAAHLPQFGSHLHWGIIALLGSIGVLGSFLGESLSKFCSPLTLRRAFAAFLVVLGGYI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVSNLPQAVGQWQQARIPSAVHAVKYP HHHHHHHHHCCHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA