| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972144
Identifier: 94972144
GI number: 94972144
Start: 351149
End: 351622
Strand: Direct
Name: 94972144
Synonym: Dgeo_2677
Alternate gene names: NA
Gene position: 351149-351622 (Clockwise)
Preceding gene: 94972145
Following gene: 94972143
Centisome position: 61.16
GC content: 65.4
Gene sequence:
>474_bases GTGACCTCTTCCAACATTCCCGGCGTTCACCCTGAGCCGGCCTCCGGCACCCGCGCCGCGACCGGACTGCTTGCTTACCT GCTTGCGGGCCTGTATTTCGGTGTGGTCCTGGTCAAGTCGGAGGCGGCGAGCTGGTACCGCATTCAGGAGATGTTCCGCT TCGAGTCCTTCCACATGTTCGGCCTGATCGGCTCGGCGGTGCTCACCGGGATGGTCACGACTGCACTGCTGCGCCGCAGT GGGGCGAGAAGCCGCGACGGACAGCGCATCACCGTCACGCCCAAAGACAAAGGCTGGTGGCGCTACGTCCTGGGCGGCCT GACCTTTGGGGTGGGCTGGGGCTTGGCAGGCGTGTGTCCGGGCCCGATCTTCACATTGCTTGGCGCAGGCGTCTGGGCCA TGCTCGTGGTGCTGGCTTTTGCCCTGCTGGGCACCTACCTGTACGGGGTGTTGAAAGACCGGCTCCCGCACTGA
Upstream 100 bases:
>100_bases CGACCCTACAAGGCCCTTCCCTGATCGCGACCGTGTCCTTTTTTGCGGGTGGCATCCTGAGCGCGAACTTTCTCCTCCCC CTCTTCATGGCGGTGATTCG
Downstream 100 bases:
>100_bases GCTGCTCTGGGGCAGAGGCAGACCACCCCGCCGCCTTATCCAGACTTGGAGAAGTTCAGGTCTCCTGGATTCGTCTCAAG ACAGACCCCAAGCACCACGC
Product: protein of unknown function DUF395, YeeE/YedE
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTSSNIPGVHPEPASGTRAATGLLAYLLAGLYFGVVLVKSEAASWYRIQEMFRFESFHMFGLIGSAVLTGMVTTALLRRS GARSRDGQRITVTPKDKGWWRYVLGGLTFGVGWGLAGVCPGPIFTLLGAGVWAMLVVLAFALLGTYLYGVLKDRLPH
Sequences:
>Translated_157_residues MTSSNIPGVHPEPASGTRAATGLLAYLLAGLYFGVVLVKSEAASWYRIQEMFRFESFHMFGLIGSAVLTGMVTTALLRRS GARSRDGQRITVTPKDKGWWRYVLGGLTFGVGWGLAGVCPGPIFTLLGAGVWAMLVVLAFALLGTYLYGVLKDRLPH >Mature_156_residues TSSNIPGVHPEPASGTRAATGLLAYLLAGLYFGVVLVKSEAASWYRIQEMFRFESFHMFGLIGSAVLTGMVTTALLRRSG ARSRDGQRITVTPKDKGWWRYVLGGLTFGVGWGLAGVCPGPIFTLLGAGVWAMLVVLAFALLGTYLYGVLKDRLPH
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16923; Mature: 16792
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSNIPGVHPEPASGTRAATGLLAYLLAGLYFGVVLVKSEAASWYRIQEMFRFESFHMF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIGSAVLTGMVTTALLRRSGARSRDGQRITVTPKDKGWWRYVLGGLTFGVGWGLAGVCP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC GPIFTLLGAGVWAMLVVLAFALLGTYLYGVLKDRLPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSSNIPGVHPEPASGTRAATGLLAYLLAGLYFGVVLVKSEAASWYRIQEMFRFESFHMF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIGSAVLTGMVTTALLRRSGARSRDGQRITVTPKDKGWWRYVLGGLTFGVGWGLAGVCP HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC GPIFTLLGAGVWAMLVVLAFALLGTYLYGVLKDRLPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA