| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is arsR [C]
Identifier: 94972017
GI number: 94972017
Start: 501768
End: 502079
Strand: Direct
Name: arsR [C]
Synonym: Dgeo_2549
Alternate gene names: 94972017
Gene position: 501768-502079 (Clockwise)
Preceding gene: 94972018
Following gene: 94972016
Centisome position: 87.4
GC content: 60.26
Gene sequence:
>312_bases TTGGCTGTTCCCGGCGTGCTTGACCAGCTCAAGGCACTCTCCCACGAGATTCGCTACGACCTGATCCGGCACCTTGCCGG GGGCGAACGCTGCGTGTGCGACCTGGAAGCCCTGCTCGACCTGCCCCAGTCCAAGGTCTCCTACCACCTGGGCATCCTGC GCGAGGCTGAACTGGTCACCGCCGAGCAGCGCGGCAAGAACACCTACTACAGCCTGCGCCAGGATCAACTCTTTCAGTTG GGTGGTGCCCTGCTCAAAGAGATTTTCACCGACCCGCTCGCCTTGACGCATCAAAATAATTCCATATGCTGA
Upstream 100 bases:
>100_bases TGGCAGCGAGGCACAGCCCGCTATGAGGGAGCGGGTTCGTAACAAACCGAGTTGGTCTTTGTTGGAGCGTCCCATCCTCT AGAATGGCTGGGTGACCACC
Downstream 100 bases:
>100_bases GAGTGTGAAGCGCGTCCTGATCCTCTGCACCCACAACTCCGCCCGCTCCCAGATGGCCGAAGCCCTCACCCGGGCCGCCG CCCAGCGACTGGGGTTCGAC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Bacterial Regulatory Protein ArsR Family; Transcriptional Regulator
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAVPGVLDQLKALSHEIRYDLIRHLAGGERCVCDLEALLDLPQSKVSYHLGILREAELVTAEQRGKNTYYSLRQDQLFQL GGALLKEIFTDPLALTHQNNSIC
Sequences:
>Translated_103_residues MAVPGVLDQLKALSHEIRYDLIRHLAGGERCVCDLEALLDLPQSKVSYHLGILREAELVTAEQRGKNTYYSLRQDQLFQL GGALLKEIFTDPLALTHQNNSIC >Mature_102_residues AVPGVLDQLKALSHEIRYDLIRHLAGGERCVCDLEALLDLPQSKVSYHLGILREAELVTAEQRGKNTYYSLRQDQLFQLG GALLKEIFTDPLALTHQNNSIC
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11548; Mature: 11417
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPGVLDQLKALSHEIRYDLIRHLAGGERCVCDLEALLDLPQSKVSYHLGILREAELVT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEQRGKNTYYSLRQDQLFQLGGALLKEIFTDPLALTHQNNSIC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure AVPGVLDQLKALSHEIRYDLIRHLAGGERCVCDLEALLDLPQSKVSYHLGILREAELVT CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEQRGKNTYYSLRQDQLFQLGGALLKEIFTDPLALTHQNNSIC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA