| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972003
Identifier: 94972003
GI number: 94972003
Start: 512418
End: 512819
Strand: Direct
Name: 94972003
Synonym: Dgeo_2535
Alternate gene names: NA
Gene position: 512418-512819 (Clockwise)
Preceding gene: 94972005
Following gene: 94972000
Centisome position: 89.25
GC content: 59.7
Gene sequence:
>402_bases GTGTTCAAAGAGGAACGGCCCGCCAAACCGACTTTCGGCCTTCGCCCTGGGTGCTTTCGGCTACAGCACCCTTCTGCTCG CCTTCGTCGCGAGGTGATTTACCCATTCGTCAGGAGGACCCACCTTGTTGTCCCTCATGTTTGTAACCGGGATCGAGAAC AGTCATCCCCCATCCGCTCTGGATGGGGGCGCCAGGATGAGCTGGAAAAAACGTGCCCCTGGCTCTTCACGGACAAGGTG TTTCGGAGCGAGGGTCTCAAGACCCACGTTCGGCTTTGCCCCCTGGCCTGGTTCGGAATGATTCCGCAGGGGAACCACCA CCCGCGTCCACGGGTCGCTCGTCCAGAGGTCTCTTCCACCCTGCGCTCCCCGTCATTTGAAGAACAGTTCGTTCATGGGT GA
Upstream 100 bases:
>100_bases CTAACCTCCTCTTCGCTCGAACACGAACCACGTCCAGTGGTGCTGCTCGGCTGCGCTCAGTGGGCCTGGAGGCAGTTTTC GCCGGTGGAGCCTGCTGGGC
Downstream 100 bases:
>100_bases AGCGTTCCTGCTCTCGCCGAGGGGCTTCAGGTTCCAGGCGTCGGTGAGGGTCCGCAGCAGGCTGTAGTGGTTGAAGTTCC GGTCACTCTGAAGGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MFKEERPAKPTFGLRPGCFRLQHPSARLRREVIYPFVRRTHLVVPHVCNRDREQSSPIRSGWGRQDELEKTCPWLFTDKV FRSEGLKTHVRLCPLAWFGMIPQGNHHPRPRVARPEVSSTLRSPSFEEQFVHG
Sequences:
>Translated_133_residues MFKEERPAKPTFGLRPGCFRLQHPSARLRREVIYPFVRRTHLVVPHVCNRDREQSSPIRSGWGRQDELEKTCPWLFTDKV FRSEGLKTHVRLCPLAWFGMIPQGNHHPRPRVARPEVSSTLRSPSFEEQFVHG >Mature_133_residues MFKEERPAKPTFGLRPGCFRLQHPSARLRREVIYPFVRRTHLVVPHVCNRDREQSSPIRSGWGRQDELEKTCPWLFTDKV FRSEGLKTHVRLCPLAWFGMIPQGNHHPRPRVARPEVSSTLRSPSFEEQFVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15610; Mature: 15610
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKEERPAKPTFGLRPGCFRLQHPSARLRREVIYPFVRRTHLVVPHVCNRDREQSSPIRS CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHH GWGRQDELEKTCPWLFTDKVFRSEGLKTHVRLCPLAWFGMIPQGNHHPRPRVARPEVSST CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LRSPSFEEQFVHG HCCCCCHHHCCCC >Mature Secondary Structure MFKEERPAKPTFGLRPGCFRLQHPSARLRREVIYPFVRRTHLVVPHVCNRDREQSSPIRS CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHH GWGRQDELEKTCPWLFTDKVFRSEGLKTHVRLCPLAWFGMIPQGNHHPRPRVARPEVSST CCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LRSPSFEEQFVHG HCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA