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The map label for this gene is yxjL [H]

Identifier: 94971954

GI number: 94971954

Start: 564016

End: 564642

Strand: Direct

Name: yxjL [H]

Synonym: Dgeo_2486

Alternate gene names: 94971954

Gene position: 564016-564642 (Clockwise)

Preceding gene: 94971955

Following gene: 94971953

Centisome position: 98.24

GC content: 67.46

Gene sequence:

>627_bases
ATGACCATCACCCTCGCCCTCGTGGACGACCAGCCCCTGATGCGCTTCGGCCTGAGTTCCCTTTTCGAGACAGACGACGA
TTTCGAGGTCGTGGGCGAGGCCGGGAACGGCGCCGACGCCGTGCGCCTGGTGCAGGACCTGCGGCCCGACGTGGTCCTGA
TGGACGTGCAGATGCCCGAACTCGACGGCGTCAGGGCCACCGCGCGCATCCGCGAACTCGGCCTCCCCTCCCGCGTCCTG
ATCCTCACGACCTTCGATACCGAGGGCTACGTGCTGGACGGCATCCGGGCGGGCGCCAGCGGGTACCTGCTCAAGGACAT
GCGCCCCACAGAACTCTTCGACGTGGTGCGGCGGGTGGCGGCGGGCGAACTCTTTATCCAGCCCAGCGTGGCGAGCAAGT
ACCTGCACCTGCTGACCACCCGGCAACTGGGGGCCGAACACCTCAGCCCCCGCGAGGAAGACGTGCTGCGCCTGCTCGCG
CGCGGGCTGAGCAACAAGGCGATTGCCCGCGACCTCGCCATCAGCGAGAGCACCGTCAAAAACCACGTCAAGAGCATCCT
CGCCAAGATGCAGGTCAGAAACCGCACGGAAGCGGCGCTGAACGCGAGCCGCTGGGTGGGCGAGTGA

Upstream 100 bases:

>100_bases
TGCTCGGCGGACACTTGACCATCGACAGCCAGCCCGGTCAGGGCACTCGGCTCACCGCTACCCTTCCCCTGCGCGCCCCC
ACCCCGGAGGTTCAACCCAC

Downstream 100 bases:

>100_bases
GTGCACTGGACGAGGTGGAGAAGGTTCTCTGGGACCACTATGGCCTGCGTGGCCCCTTCGAAGTCACTGCCCTGGCCGCC
GAGGGGCGGAACAACAGCCT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTITLALVDDQPLMRFGLSSLFETDDDFEVVGEAGNGADAVRLVQDLRPDVVLMDVQMPELDGVRATARIRELGLPSRVL
ILTTFDTEGYVLDGIRAGASGYLLKDMRPTELFDVVRRVAAGELFIQPSVASKYLHLLTTRQLGAEHLSPREEDVLRLLA
RGLSNKAIARDLAISESTVKNHVKSILAKMQVRNRTEAALNASRWVGE

Sequences:

>Translated_208_residues
MTITLALVDDQPLMRFGLSSLFETDDDFEVVGEAGNGADAVRLVQDLRPDVVLMDVQMPELDGVRATARIRELGLPSRVL
ILTTFDTEGYVLDGIRAGASGYLLKDMRPTELFDVVRRVAAGELFIQPSVASKYLHLLTTRQLGAEHLSPREEDVLRLLA
RGLSNKAIARDLAISESTVKNHVKSILAKMQVRNRTEAALNASRWVGE
>Mature_207_residues
TITLALVDDQPLMRFGLSSLFETDDDFEVVGEAGNGADAVRLVQDLRPDVVLMDVQMPELDGVRATARIRELGLPSRVLI
LTTFDTEGYVLDGIRAGASGYLLKDMRPTELFDVVRRVAAGELFIQPSVASKYLHLLTTRQLGAEHLSPREEDVLRLLAR
GLSNKAIARDLAISESTVKNHVKSILAKMQVRNRTEAALNASRWVGE

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=209, Percent_Identity=39.7129186602871, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=42.713567839196, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1790102, Length=197, Percent_Identity=32.48730964467, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1788222, Length=202, Percent_Identity=29.7029702970297, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=29, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788712, Length=187, Percent_Identity=25.1336898395722, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788546, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082052, Length=103, Percent_Identity=34.9514563106796, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22942; Mature: 22811

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITLALVDDQPLMRFGLSSLFETDDDFEVVGEAGNGADAVRLVQDLRPDVVLMDVQMPE
CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC
LDGVRATARIRELGLPSRVLILTTFDTEGYVLDGIRAGASGYLLKDMRPTELFDVVRRVA
CCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHH
AGELFIQPSVASKYLHLLTTRQLGAEHLSPREEDVLRLLARGLSNKAIARDLAISESTVK
CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NHVKSILAKMQVRNRTEAALNASRWVGE
HHHHHHHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TITLALVDDQPLMRFGLSSLFETDDDFEVVGEAGNGADAVRLVQDLRPDVVLMDVQMPE
EEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCC
LDGVRATARIRELGLPSRVLILTTFDTEGYVLDGIRAGASGYLLKDMRPTELFDVVRRVA
CCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHH
AGELFIQPSVASKYLHLLTTRQLGAEHLSPREEDVLRLLARGLSNKAIARDLAISESTVK
CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
NHVKSILAKMQVRNRTEAALNASRWVGE
HHHHHHHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]