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The map label for this gene is rhaB [H]

Identifier: 94971921

GI number: 94971921

Start: 32090

End: 33577

Strand: Direct

Name: rhaB [H]

Synonym: Dgeo_2453

Alternate gene names: 94971921

Gene position: 32090-33577 (Clockwise)

Preceding gene: 94971922

Following gene: 94971920

Centisome position: 5.59

GC content: 65.66

Gene sequence:

>1488_bases
ATGTCCGCTGAGGGTGCCCACGTGCGGCGGCATGTCGCCATTGATCTGGGTGCCTCCAGTGGCCGGGTAGCGCTGGGCAC
CGTGCAAGAGGGGCGGCTGTCGGTCAAGGTTCTTCACCGCTTCGCGAATGGAGGTGTGCCGCTGCGGGGCGGGCTGTACT
GGGACCTGCTCGGTCTCTGGCGGGAGATCCTGCATGGCCTGCGCCTCGCCGCACAAGACGGCCCTATCACCAGTGTCGGC
GTGGACTCCTGGGCGGTGGACTATGCCCTGTTGGACGAACACGACCTACTGCTGGACGGCGTGCATCACTACCGCGACCC
CCGGACGAATGGCGTGATGGAAACGGTGGTGGCCGAGTTGGGCCGCGCGACGATCTATGAGGCGACCGGTCTCCAGTTTT
TGCCCTTCAACACGGTCTATCAACTCCTTGCGCAGGCACGGCAGGCCCCCGGCTTACTCCAGCGGGCCAAGACCCTGCTG
CTGGTTCCAGATCTGCTGCACTTTTGGCTCTCTGGCCGCCGCGTGACCGAGCAAACGAATGCCAGCACCACGGGGCTATA
CGACCCCCGCCAGCGGGCCTGGTCCGCGCCGCTCCTTCAGGCGTGGGGCCTGCCCGCTGGGCTTTTTCCGCCGATCGTTG
CCCCAGGAACAGTGTTGGGTGAACTGACGCCAGAAGTCGCCCAGGAGACGGGCCTGTGGGGTACGCGCGTTGTGGTTCCC
GCAACCCATGACACCGCCAGCGCTGTGGCTGCTGTGCCTGCCACGGGCGAAGATTGGGCGTATCTGTCCAGCGGCACATG
GTCACTGGTGGGTGTGGAAACAGCTCATCCGGTCATCACGCCGGAGGCGCTGGCGCAGAACCTCACCAACGAAGCCGGCG
TCAACGGAACGACCCGTCTGCTCAAGAATGTCATGGGTCTGTGGATCGTGCAGGAGTGTCGCCGTGCCTGGGGAGAGCCG
GACTACAGAACGCTGTATGCCGAGGCTGCTGCCGCCCCCGCCGGTGGCCCCCTCATCGATCCGGATGATGCGTGCTTTCT
GCCCCCGGGCCTCGAGATGCCTCAGCGCATTCAGCGGTTTTGCGAGGCCACCGGTCAGCCTCTTCCGAGAACGCGGGCAG
AACTCGTCCGCTGCGTTCTGGAAAGCCTGGCCTACCGCACGGCAGAAATCCTCCAGCAACTGGAGGACGTGACCGGACGG
TCCATCACCACGCTGCATGTGGTGGGTGGTGGCGCCCAGATTGACTTTCTCAACCAGCTTCTCGCGGACGTGACCGGGCG
CCGGGTGGTGGCTGGGCCGGTGGAAGCCACCCTGCTCGGCAATCTGCTTGTGCAGGCAGAAGCCTGTGGGAGCATTCCGG
CGGATTGTCGGCGTGCTTTGGTGCTGTCCTCAGAAGCCCTGCACACCTTTGTCCCGCGCGAGGCCGTTGCCCCGGAGCGG
CTCGCCCTGTTCGCGCGGTTGCGTCGTCCCCACCGCGTGCTGTCTTGA

Upstream 100 bases:

>100_bases
CCCGAGGACATCGCGGAGGCAACCTTCTTCTTCGCGACGCCTGCTGCGAGCAAAACCACCGGCGGCATCCTCACGGTGGA
CGGCGGTGTTCCTCTCGCCT

Downstream 100 bases:

>100_bases
AACCGCACAGGGGGCTCCCGCCGTCACGTCCTGGCCTCAGCCTTTTTGATTTCTGCCCGAGGTATGCCCTGTGAAGATCG
ATCTATTCATCACCTGCCTC

Product: carbohydrate kinase, FGGY

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSAEGAHVRRHVAIDLGASSGRVALGTVQEGRLSVKVLHRFANGGVPLRGGLYWDLLGLWREILHGLRLAAQDGPITSVG
VDSWAVDYALLDEHDLLLDGVHHYRDPRTNGVMETVVAELGRATIYEATGLQFLPFNTVYQLLAQARQAPGLLQRAKTLL
LVPDLLHFWLSGRRVTEQTNASTTGLYDPRQRAWSAPLLQAWGLPAGLFPPIVAPGTVLGELTPEVAQETGLWGTRVVVP
ATHDTASAVAAVPATGEDWAYLSSGTWSLVGVETAHPVITPEALAQNLTNEAGVNGTTRLLKNVMGLWIVQECRRAWGEP
DYRTLYAEAAAAPAGGPLIDPDDACFLPPGLEMPQRIQRFCEATGQPLPRTRAELVRCVLESLAYRTAEILQQLEDVTGR
SITTLHVVGGGAQIDFLNQLLADVTGRRVVAGPVEATLLGNLLVQAEACGSIPADCRRALVLSSEALHTFVPREAVAPER
LALFARLRRPHRVLS

Sequences:

>Translated_495_residues
MSAEGAHVRRHVAIDLGASSGRVALGTVQEGRLSVKVLHRFANGGVPLRGGLYWDLLGLWREILHGLRLAAQDGPITSVG
VDSWAVDYALLDEHDLLLDGVHHYRDPRTNGVMETVVAELGRATIYEATGLQFLPFNTVYQLLAQARQAPGLLQRAKTLL
LVPDLLHFWLSGRRVTEQTNASTTGLYDPRQRAWSAPLLQAWGLPAGLFPPIVAPGTVLGELTPEVAQETGLWGTRVVVP
ATHDTASAVAAVPATGEDWAYLSSGTWSLVGVETAHPVITPEALAQNLTNEAGVNGTTRLLKNVMGLWIVQECRRAWGEP
DYRTLYAEAAAAPAGGPLIDPDDACFLPPGLEMPQRIQRFCEATGQPLPRTRAELVRCVLESLAYRTAEILQQLEDVTGR
SITTLHVVGGGAQIDFLNQLLADVTGRRVVAGPVEATLLGNLLVQAEACGSIPADCRRALVLSSEALHTFVPREAVAPER
LALFARLRRPHRVLS
>Mature_494_residues
SAEGAHVRRHVAIDLGASSGRVALGTVQEGRLSVKVLHRFANGGVPLRGGLYWDLLGLWREILHGLRLAAQDGPITSVGV
DSWAVDYALLDEHDLLLDGVHHYRDPRTNGVMETVVAELGRATIYEATGLQFLPFNTVYQLLAQARQAPGLLQRAKTLLL
VPDLLHFWLSGRRVTEQTNASTTGLYDPRQRAWSAPLLQAWGLPAGLFPPIVAPGTVLGELTPEVAQETGLWGTRVVVPA
THDTASAVAAVPATGEDWAYLSSGTWSLVGVETAHPVITPEALAQNLTNEAGVNGTTRLLKNVMGLWIVQECRRAWGEPD
YRTLYAEAAAAPAGGPLIDPDDACFLPPGLEMPQRIQRFCEATGQPLPRTRAELVRCVLESLAYRTAEILQQLEDVTGRS
ITTLHVVGGGAQIDFLNQLLADVTGRRVVAGPVEATLLGNLLVQAEACGSIPADCRRALVLSSEALHTFVPREAVAPERL
ALFARLRRPHRVLS

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=469, Percent_Identity=41.7910447761194, Blast_Score=326, Evalue=2e-90,
Organism=Escherichia coli, GI1789168, Length=358, Percent_Identity=29.608938547486, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787789, Length=334, Percent_Identity=29.0419161676647, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790005, Length=382, Percent_Identity=24.869109947644, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 53455; Mature: 53324

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEGAHVRRHVAIDLGASSGRVALGTVQEGRLSVKVLHRFANGGVPLRGGLYWDLLGLW
CCCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHH
REILHGLRLAAQDGPITSVGVDSWAVDYALLDEHDLLLDGVHHYRDPRTNGVMETVVAEL
HHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
GRATIYEATGLQFLPFNTVYQLLAQARQAPGLLQRAKTLLLVPDLLHFWLSGRRVTEQTN
CCCEEEECCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
ASTTGLYDPRQRAWSAPLLQAWGLPAGLFPPIVAPGTVLGELTPEVAQETGLWGTRVVVP
CCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCEEEEE
ATHDTASAVAAVPATGEDWAYLSSGTWSLVGVETAHPVITPEALAQNLTNEAGVNGTTRL
CCCCHHHHHEECCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH
LKNVMGLWIVQECRRAWGEPDYRTLYAEAAAAPAGGPLIDPDDACFLPPGLEMPQRIQRF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHH
CEATGQPLPRTRAELVRCVLESLAYRTAEILQQLEDVTGRSITTLHVVGGGAQIDFLNQL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
LADVTGRRVVAGPVEATLLGNLLVQAEACGSIPADCRRALVLSSEALHTFVPREAVAPER
HHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHH
LALFARLRRPHRVLS
HHHHHHHHCCHHCCC
>Mature Secondary Structure 
SAEGAHVRRHVAIDLGASSGRVALGTVQEGRLSVKVLHRFANGGVPLRGGLYWDLLGLW
CCCCCCEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHH
REILHGLRLAAQDGPITSVGVDSWAVDYALLDEHDLLLDGVHHYRDPRTNGVMETVVAEL
HHHHHHHHHHCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
GRATIYEATGLQFLPFNTVYQLLAQARQAPGLLQRAKTLLLVPDLLHFWLSGRRVTEQTN
CCCEEEECCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
ASTTGLYDPRQRAWSAPLLQAWGLPAGLFPPIVAPGTVLGELTPEVAQETGLWGTRVVVP
CCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCEEEEE
ATHDTASAVAAVPATGEDWAYLSSGTWSLVGVETAHPVITPEALAQNLTNEAGVNGTTRL
CCCCHHHHHEECCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHH
LKNVMGLWIVQECRRAWGEPDYRTLYAEAAAAPAGGPLIDPDDACFLPPGLEMPQRIQRF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHH
CEATGQPLPRTRAELVRCVLESLAYRTAEILQQLEDVTGRSITTLHVVGGGAQIDFLNQL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
LADVTGRRVVAGPVEATLLGNLLVQAEACGSIPADCRRALVLSSEALHTFVPREAVAPER
HHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHH
LALFARLRRPHRVLS
HHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]