| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971891
Identifier: 94971891
GI number: 94971891
Start: 64300
End: 65217
Strand: Direct
Name: 94971891
Synonym: Dgeo_2423
Alternate gene names: NA
Gene position: 64300-65217 (Clockwise)
Preceding gene: 94971897
Following gene: 94971890
Centisome position: 11.2
GC content: 64.71
Gene sequence:
>918_bases ATGAACAAACTGGAGCAAGCCCCGCTGACGGTTGGTCCCGAAGGGGGCGTCTCGCCCGCGAGCGGGGTGGCGAGTGTGGA ACGGCGTGCCTTCGGGCTGCCGGGCGTTCCGGCAGTGTTGCTGTGGCTGGTGCTGGTCGCGTTGGCGTTCTGGGTCACGC TAAGCGGTCTGAGTATCGGTCTGGGGTTTGTGCTCGGCCTGCTGGCGCTGTTTACCCTGTTGGGATTTTTTGTCGTGCAG CCCAACCAGGCCAAGGTTCTCACCCTCTTTGGCCGCTACGTGGGCACCGAGCGGCGCAACGGCTTCTACTGGACCAACCC TTTCACCGTGCGCCAGAATGTGTCCCTGCGGATTCGCAACTTCAACTCCGAACGGTTGAAGGTGAACGACCAGACCGGCA ACCCCATCGAGATTGCCGCCGTGATTGTCTGGCGAGTGGTGGATACGGCCCGCGCCGTCTTTGACGTCGAGGACTACGCC GAGTTTGTGGCGATCCAGTCCGAGACGGCCCTGCGTCACCTCGCCGCGGGGTACCCCTATGACGACTACGACGGCAAGAG CCTTTCCCTGCGCGGCAATCCCGATGAGGTCTCTGAGGCGCTTGCCCGCGAACTCGCCACCCGGCTGCGGCACGCGGGCG TGGAGGTGCTGGAAGCCCGCCTCTCCCACCTCGCCTACTCGCCCGAGATTGCCGGGGCGATGCTGCAACGCCAGCAGGCC AGTGCGATCATCGCCGCCCGACAGCAGATCGTGCAGGGGGCTGTCGGCATGGTCGAGATGGCCCTGACCCAGCTTTCCGA ACAAGACATCGTGCAGCTCGACGAGGAACGCAAGGCGCAGATGGTCAGCAATCTGCTCGTCGTGCTGACGAGCGAGCGCG GCACCCAGCCCGTCGTGAACGCCGGGAGCCTGTATTGA
Upstream 100 bases:
>100_bases CACCCGGCCGCCGACCACCTTGCCTGAGACCACCGTGCCCGAGACCACCAGTGCTCATCTTTTTGATGTCAATGTGATAT CACTATGACTGGAGGTGAGT
Downstream 100 bases:
>100_bases GCGCAAGGCAGTGGGCCTGGACCGGGAAGGCCGGGTGAGGAAGCGTGCCTCGCAAGCATTACCCGCTGCGGATCAGTCCC GAACTGTACGCTGCCCTGGA
Product: band 7 protein
Products: NA
Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; Somatin-Like Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Transmembrane Protein; Membrane Protease Subunit Stomatin/Prohibitin; HFLK Protein
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNKLEQAPLTVGPEGGVSPASGVASVERRAFGLPGVPAVLLWLVLVALAFWVTLSGLSIGLGFVLGLLALFTLLGFFVVQ PNQAKVLTLFGRYVGTERRNGFYWTNPFTVRQNVSLRIRNFNSERLKVNDQTGNPIEIAAVIVWRVVDTARAVFDVEDYA EFVAIQSETALRHLAAGYPYDDYDGKSLSLRGNPDEVSEALARELATRLRHAGVEVLEARLSHLAYSPEIAGAMLQRQQA SAIIAARQQIVQGAVGMVEMALTQLSEQDIVQLDEERKAQMVSNLLVVLTSERGTQPVVNAGSLY
Sequences:
>Translated_305_residues MNKLEQAPLTVGPEGGVSPASGVASVERRAFGLPGVPAVLLWLVLVALAFWVTLSGLSIGLGFVLGLLALFTLLGFFVVQ PNQAKVLTLFGRYVGTERRNGFYWTNPFTVRQNVSLRIRNFNSERLKVNDQTGNPIEIAAVIVWRVVDTARAVFDVEDYA EFVAIQSETALRHLAAGYPYDDYDGKSLSLRGNPDEVSEALARELATRLRHAGVEVLEARLSHLAYSPEIAGAMLQRQQA SAIIAARQQIVQGAVGMVEMALTQLSEQDIVQLDEERKAQMVSNLLVVLTSERGTQPVVNAGSLY >Mature_305_residues MNKLEQAPLTVGPEGGVSPASGVASVERRAFGLPGVPAVLLWLVLVALAFWVTLSGLSIGLGFVLGLLALFTLLGFFVVQ PNQAKVLTLFGRYVGTERRNGFYWTNPFTVRQNVSLRIRNFNSERLKVNDQTGNPIEIAAVIVWRVVDTARAVFDVEDYA EFVAIQSETALRHLAAGYPYDDYDGKSLSLRGNPDEVSEALARELATRLRHAGVEVLEARLSHLAYSPEIAGAMLQRQQA SAIIAARQQIVQGAVGMVEMALTQLSEQDIVQLDEERKAQMVSNLLVVLTSERGTQPVVNAGSLY
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33265; Mature: 33265
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLEQAPLTVGPEGGVSPASGVASVERRAFGLPGVPAVLLWLVLVALAFWVTLSGLSIG CCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGFVLGLLALFTLLGFFVVQPNQAKVLTLFGRYVGTERRNGFYWTNPFTVRQNVSLRIRN HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCEEECCCEEEECCCEEEEEE FNSERLKVNDQTGNPIEIAAVIVWRVVDTARAVFDVEDYAEFVAIQSETALRHLAAGYPY CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDYDGKSLSLRGNPDEVSEALARELATRLRHAGVEVLEARLSHLAYSPEIAGAMLQRQQA CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SAIIAARQQIVQGAVGMVEMALTQLSEQDIVQLDEERKAQMVSNLLVVLTSERGTQPVVN HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC AGSLY CCCCC >Mature Secondary Structure MNKLEQAPLTVGPEGGVSPASGVASVERRAFGLPGVPAVLLWLVLVALAFWVTLSGLSIG CCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGFVLGLLALFTLLGFFVVQPNQAKVLTLFGRYVGTERRNGFYWTNPFTVRQNVSLRIRN HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCEEECCCEEEECCCEEEEEE FNSERLKVNDQTGNPIEIAAVIVWRVVDTARAVFDVEDYAEFVAIQSETALRHLAAGYPY CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDYDGKSLSLRGNPDEVSEALARELATRLRHAGVEVLEARLSHLAYSPEIAGAMLQRQQA CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SAIIAARQQIVQGAVGMVEMALTQLSEQDIVQLDEERKAQMVSNLLVVLTSERGTQPVVN HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC AGSLY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA