Definition Candidatus Koribacter versatilis Ellin345, complete genome.
Accession NC_008009
Length 5,650,368

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 94968647

GI number:

Start: 1963078

End: 1964226

Strand: Reverse

Name: Not Available

Synonym: Acid345_1619

Alternate gene names: NA

Gene position: NA

Preceding gene: 94968648

Following gene: 94968646

Centisome position: NA

GC content: NA

Gene sequence:

>1149_bases
ATGAAATTCCTGCCGTTGCTCTTCAGGAACATCACTCGCAAGTGGACGCGCCTGCTGCTCACCATCGGTTCGTTCGCGAT
CGCGCTGTTTCTCTTTGGCATTCTCGCCGTGGTGAACAACTCTTTTAACGGCGCACTGAACAGCATGGCCGGGGTGGATC
GCCTGATGGTCCAGAACCGCGTCTCCATCATTCAGCCGGTGCCGGAAGCGTACAAAGCCAAAATCGAGCAGATCGAGCAC
GTGAAACTCGTCACGTACGCCAACTGGTTTGGCGCCGTTTACCAAGACGAGAAGAACTTCTTCCCTCAGTATGCAATTGA
TGAGGAAAGCTACCGCAAGATGTATCCGGAGTTCCGCGTCGCCGACGCCGAATGGAAGGCTTGGGAAGACGACCGCGAAG
GCGTGATTGTCGGCGAGAAGACTGCCGAGAAATACGGCTTCAAAGTTGGCGACCGCGTCCCTCTGAAGGGTGTGCTCTGG
GGCGGCGGAGAGTCCTGGTCGTTCAACGTGCGCGGCATCTACCACGCTAAACCCGACGAAGATCAGAGTCAGTTCTGGCT
GCACTGGAAGCTCTTCGATGAGCGCCGCCAGTTCAGCAAAGGCACGGTTGGCTGGTACATCGTTCGTGTGGATAGCCCCG
ACAACGCTGTCGAGGTGAGCAAGAAGATCGACGCGATGTTCGCCAACTCCTCCACCGAGACGAAAACGCAGACCGAGAAA
GAGATGATGGCAAGCTGGGCCAAGCAGACCGGCAACGTCGGCCTGATCATCACCATTATCGGCAGCGTCGTGTTCTTCAC
GTTATTGCTCGTGGTCGGCAACACCATGGCAATGTCGATCCGCGAACGCATGCGTGAACTTGCGGTGCTCAAGGCCATCG
GCTACACGGATCGCTTCGTGCTCGTTTTCGTGATCGCCGAATCCGTGGTCGTCGCATTCATCGGCGTGGCCATTGGGCTT
GGGTTACTGTTGCTATCTCTACCCGGCATCGAGAAGGCGCTGAGCAGCTTCTTGCAGTTTGTCTTCCTGCCGCCGCAGAA
AGCCATCGAGGGCGTTGTTATCACTCTGTTCATCGCCTTCCTTGCGGGCATCATTCCTGCAGTCAATGCCAGCCGTCTGC
GCGTAGTAGACGCCATCCGGAGAGTGTGA

Upstream 100 bases:

>100_bases
TTACGCACGACCCACTAGCGGCCGAGCGTGCCCATTCCCTCCTTCACATGGATAAAGGCGTTCTCGTTGAAGCCGAGAAG
GCCCGCGTAGGAGAAGTGTA

Downstream 100 bases:

>100_bases
CGTGGCCATTCCGATCTCGTACAACATTCGCAGTCTCGGAGTTCGCTGGTCCTCCACGCTCGTAGCCGTCATCGGCATCG
CCGGCACGGTTGGAGTATTC

Product: ABC efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>382_residues
MKFLPLLFRNITRKWTRLLLTIGSFAIALFLFGILAVVNNSFNGALNSMAGVDRLMVQNRVSIIQPVPEAYKAKIEQIEH
VKLVTYANWFGAVYQDEKNFFPQYAIDEESYRKMYPEFRVADAEWKAWEDDREGVIVGEKTAEKYGFKVGDRVPLKGVLW
GGGESWSFNVRGIYHAKPDEDQSQFWLHWKLFDERRQFSKGTVGWYIVRVDSPDNAVEVSKKIDAMFANSSTETKTQTEK
EMMASWAKQTGNVGLIITIIGSVVFFTLLLVVGNTMAMSIRERMRELAVLKAIGYTDRFVLVFVIAESVVVAFIGVAIGL
GLLLLSLPGIEKALSSFLQFVFLPPQKAIEGVVITLFIAFLAGIIPAVNASRLRVVDAIRRV

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA