Definition Candidatus Koribacter versatilis Ellin345, complete genome.
Accession NC_008009
Length 5,650,368

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Identifier: 94967650

GI number:

Start: 756569

End: 759001

Strand: Reverse

Name: Not Available

Synonym: Acid345_0619

Alternate gene names: NA

Gene position: NA

Preceding gene: 94967651

Following gene: 94967649

Centisome position: NA

GC content: NA

Gene sequence:

>2433_bases
ATGCCCGATGTTCGCTTCGCCATCCGCCAGTTGCTGCGCAACAAAGCCTTCGCCATCACGGTGGTCTTCACGCTCGCGCT
CTCGATCGGCGCCAATACCGCGATCTTCTCGGTCGTCAACGCGCTGCTCATCCGCCCGCTGCCGTACCCGCAGCCGGAGC
GGCTGGGAACCATCTTCGGCCGCGTATCCGGCCCGGGCAACGCCGAGGACGAACGCTCCGGTGTGGACGGCGAAAAGTGG
GAGCTCCTGCGCGACAACGTTCCCGCCGTGCTTGCGGCGGTGCAGAGCGAATTCGCGGCAGGGGCCAATCTCAAGGCCGG
ATCGGCGGTGCAATATGTCCACGCCGGCCGCGTCTCCGCGCACTATTTCGAAGTGCTGGGCACCACGCCACGCCTGGGCC
GCACCTTTACCGAAGACGAGGATCGCGATGGCGGACCCCAGGCTGCGATCCTCAGCGACGGTCTTTGGCGCAGTGCGTTC
GGCGCCGATCCCCGCGTCATCGGCACCAACATCCTCCTCAAGGGCGAACCGTCCACGATCGTCGGGGTAATGCCGCCGCA
CTTCGCCATGCCCCAGTCGGCGGACATCTTCACGCCAATCCGTGCCTCGCGCCATGGCGAGGGCACCGGCACCAACTTCA
CCGCGATCGTGCGCCTTCGTCCAGGCGCCACCTGGCAGCAAGCCGACACGCAAATCAATGCTGCATGGGCTGATCGTATC
AACCGCTTCGAGAAGCACAATCCCGGCTCGCACGTCTCGTACTACAGCGTGCCGCTACAACAAGGCCAAAGCGCCGATCT
CCGCGGACCGGTCGTAGCGCTAATGGGCGCCGTGGCTTTCATCCTGATGATCGCCTGCGCGAACCTTGCCGGGCTGATGC
TCGTCCGCGTCGCGCGCCGCACACCTGAGTTCGCCACCCGTCTCGCACTCGGCGCGTCGCGGTGGGACATCCTGCGCCAG
CTTTGGACCGAAGGCCTGGTGCTTGCCGTCGCCGGTGGCGGCGCGGGCGTTGTGCTGGCGTTCGGCGCTCTCCGCGCGTT
GACCACGCTGCTTCCGCCAGACCTGCTGCCGGTGCAGAACATCGCGCTCGATGGCCGCGTGCTGCTCTTTACCGCGCTTG
CCACCATCGCCACCAGCGTGCTCTTCGGGCTGCTGCCCGCGCTGCAAACGCGACGCCTCGATCTTCGCGCCGCCATCGCC
GCCGGATCCAGCCGCAGCGTCTCTGCCGGCGGACACACCCGCGTTCGTCAGGCATTGATCGCCGGCGAAATCGCACTCAC
GGTCGTGTTGCTCGCCGCTTCCGGCCTGCTCGTGCGTACCCTTGTCTATCTCGAAACGCTGCCGTCCGGCTTCGACGCAA
ACAACGTGATGGCCGCGCGTCTCTCCCTCGATGACGCGCGCTATCACGATCCTGCAAAGTTTCGAGATCTATTAAGCAAG
AGCCTGGCATCGATGCGACAGATTCCCGGCGCCGAATCCGCCTCCGTCGGCCTAAGCCTGCCCTACGAGCGCGGTCTGAA
TGACGGCATCAAGATCGCCGACGGCAAAGAAGCCGGCCAGCAACCGACGGCCACCGTCATCTACGTCACCCCGCAATATT
TCGAGACTTTGCGCATTCCCGTGCTCGCGGGCCGCACCTTTACCGAAGCCGACACCGCCGACAGCCAGCCCGTCGTCATC
GTGAACCAGTCCTTCGCGCGTCGGTATCTCAACCAGCCCGACGCCACCGGCCGCCAGCTCGGCGCCGATAAACCACGCAT
CGTCGTCGCGGTCGTAGCCGATGTCGCCAAAGCTCCCGGCTTCGATTCCGATCAGCCTCTGAATGTCGAGCCGACGGTAT
ACGTTCCCGCTACCCAGGTGCCGGGCGTACTGATCGCCGTCGCTCACATCTGGTTCCAGCCCAGTTGGATCGTCCGCACC
AGCGGCCCCGTGACCGGCCTTACCGAGCAGATGCAGCACGCGCTGGCCTCCGCCGATCCTTCGCTGCCCTTCTCCGGTTT
CTATCGCATGACTGACATCCGCGCAGAAGCCGTCACTATGCAGCGCGTGGAAGTCACGCTGCTCACTACTCTGGCAGCGC
TCGCGCTCTTGCTCTCGGCGATCGGAATCTTCGCTCTCGTCTCGAACCTCGTGCTGCAGCGCACGCGCGAAATCGGCATT
CGCATCGCGCTCGGCTCCACCATCCACCAGGCCATGCTCGAGATCGGCCGCTCCGGACTCATCTCCGCAGCGTGCGGACT
CGCCGCCGGCCTCGTTCTCTCCGCTTTCGCGTTGCGCATTACCAAGAGCGCTCTCTACGGCGTGCGCATCTACGATCCGG
TGACGTTGTTCGGCGTGCTGGGAATCCTCGCGATCATCGCGCTCGGCGCGACGTATCTTCCGACGCTGCGTATCGCGCGC
ATTCATCCGGCGGAAACATTGCGCGCCGAATAG

Upstream 100 bases:

>100_bases
TCTTTCTGCCCTGAAGGCCGCCGGAAAATTGCCTCGTCGGGGAACTAAGGCGGGTACCTCCGCGTAAACCCTGGCAGGAC
ATCTCCATCCTGGAGCCGCC

Downstream 100 bases:

>100_bases
CACCAACTCTGTCCGGTTTCGGACAACTTAGTCTCCTTCCGGACGGCACTCGTCCCACCTTGCTCACTCGGCAGGCACTT
AACCGTCTGTGTCTCAAACA

Product: ABC efflux pump, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>810_residues
MPDVRFAIRQLLRNKAFAITVVFTLALSIGANTAIFSVVNALLIRPLPYPQPERLGTIFGRVSGPGNAEDERSGVDGEKW
ELLRDNVPAVLAAVQSEFAAGANLKAGSAVQYVHAGRVSAHYFEVLGTTPRLGRTFTEDEDRDGGPQAAILSDGLWRSAF
GADPRVIGTNILLKGEPSTIVGVMPPHFAMPQSADIFTPIRASRHGEGTGTNFTAIVRLRPGATWQQADTQINAAWADRI
NRFEKHNPGSHVSYYSVPLQQGQSADLRGPVVALMGAVAFILMIACANLAGLMLVRVARRTPEFATRLALGASRWDILRQ
LWTEGLVLAVAGGGAGVVLAFGALRALTTLLPPDLLPVQNIALDGRVLLFTALATIATSVLFGLLPALQTRRLDLRAAIA
AGSSRSVSAGGHTRVRQALIAGEIALTVVLLAASGLLVRTLVYLETLPSGFDANNVMAARLSLDDARYHDPAKFRDLLSK
SLASMRQIPGAESASVGLSLPYERGLNDGIKIADGKEAGQQPTATVIYVTPQYFETLRIPVLAGRTFTEADTADSQPVVI
VNQSFARRYLNQPDATGRQLGADKPRIVVAVVADVAKAPGFDSDQPLNVEPTVYVPATQVPGVLIAVAHIWFQPSWIVRT
SGPVTGLTEQMQHALASADPSLPFSGFYRMTDIRAEAVTMQRVEVTLLTTLAALALLLSAIGIFALVSNLVLQRTREIGI
RIALGSTIHQAMLEIGRSGLISAACGLAAGLVLSAFALRITKSALYGVRIYDPVTLFGVLGILAIIALGATYLPTLRIAR
IHPAETLRAE

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA