Click here to switch to the map view.

The map label for this gene is yhbW [H]

Identifier: 94314855

GI number: 94314855

Start: 139884

End: 140915

Strand: Reverse

Name: yhbW [H]

Synonym: Rmet_5936

Alternate gene names: 94314855

Gene position: 140915-139884 (Counterclockwise)

Preceding gene: 94314856

Following gene: 94314853

Centisome position: 5.46

GC content: 67.54

Gene sequence:

>1032_bases
ATGCAAGCTTTCCCCATGACTCCCTATTCCCTGCTCGACCTCTCGCCCATCATCGAAGGCAGCGACGCCACCCAGGCCAT
GCGCAACACGCTGAGCCTGGCGCAGCACGCGGAACGTCTTGGCTATCGGCGCTTCTGGCTGGCCGAACACCACAACATGC
CGGGCATTGCCAGTGCCGCCACGGCGGTGCTGATCGGGTACGTCGCCAACGGCACCTCGACGATCCGGGTCGGCTCCGGT
GGCATCATGCTGCCCAACCATTCCCCGCTGGTGGTGGCCGAACAGTTCGGCACGCTGGCCTCACTCTATCCGGGCCGGAT
CGACCTCGGGCTGGGCCGCGCCCCCGGCACCGACCAGGCCACGGCACGCGCGCTGCGCCGAACCCTGAGCCACGACTCGG
CCGACTCGTTCCCGCAGGATGTGGAAGAACTGCAAGCGTACTTTGATGAGGTGCGACCCGGCCAGCGCGTGCGCGCCGTG
CCGGGCGCGGGGCTCAAGGTGCCGCTGTGGCTCCTCGGTTCCAGCCTTTTCGGCGCGCAGCTAGCAGCGGCGATGGGCCT
GCCTTTCGCGTTTGCTTCGCACTTTGCCCCGGGCTTCATGCGGCAGGCGGTAGACCTGTATCGCCGCACCTTCCGCCCGT
CGGAGCAGCTCGATCGTCCGCACGTGATGCTTGGCCTCAACGTGTTCGCCGCCGAGACCGATGCCGAGGCGCGTCGCCTG
TTCAGTTCGCTGCAGCAGCAGTTTCTGGCGCTGGTTCGCGGCACGCCGGGACAGCTCAAGCCGCCGGTCGACGATATCGA
GCGTCTGTGGGATGCCAGCGAAGCGGAGCATATCCGCCGGTCCCTCGCCTGCTCGGTCGTGGGAGACCCGGCAACGGTAC
GCGAGGGCATCCAGCGTTTCGTGGACGATCTGCGGCCGGACGAGCTGATGCTGACCGGCCAGATCTACGACCATGCCGCG
CGGCTGCGATCGTTCGAGATCGCAGCCGATGCCATGCGCGCGCTACAGCCCGCATCATCGCAGACGGCGTGA

Upstream 100 bases:

>100_bases
CCGTCATGGCTACTTTGCCGCCGCCAGCACGATCTGGCCGGTGTGACTACCATAGCCCGTCCCTGATTCAAGACCTCGCG
TGGCATGCGTCGCGCGAGGC

Downstream 100 bases:

>100_bases
TGACGGGAAGTCGTCGATAACAGGAAGGCCAGCAGGTTCAGACCGTTGCCAGCCGGAACGCCGACACCGCACGCATCATC
GACTGCGCCTGCTCGGCCAG

Product: putative monooxygenase with luciferase-like ATPase activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MQAFPMTPYSLLDLSPIIEGSDATQAMRNTLSLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSG
GIMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQATARALRRTLSHDSADSFPQDVEELQAYFDEVRPGQRVRAV
PGAGLKVPLWLLGSSLFGAQLAAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSEQLDRPHVMLGLNVFAAETDAEARRL
FSSLQQQFLALVRGTPGQLKPPVDDIERLWDASEAEHIRRSLACSVVGDPATVREGIQRFVDDLRPDELMLTGQIYDHAA
RLRSFEIAADAMRALQPASSQTA

Sequences:

>Translated_343_residues
MQAFPMTPYSLLDLSPIIEGSDATQAMRNTLSLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSG
GIMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQATARALRRTLSHDSADSFPQDVEELQAYFDEVRPGQRVRAV
PGAGLKVPLWLLGSSLFGAQLAAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSEQLDRPHVMLGLNVFAAETDAEARRL
FSSLQQQFLALVRGTPGQLKPPVDDIERLWDASEAEHIRRSLACSVVGDPATVREGIQRFVDDLRPDELMLTGQIYDHAA
RLRSFEIAADAMRALQPASSQTA
>Mature_343_residues
MQAFPMTPYSLLDLSPIIEGSDATQAMRNTLSLAQHAERLGYRRFWLAEHHNMPGIASAATAVLIGYVANGTSTIRVGSG
GIMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQATARALRRTLSHDSADSFPQDVEELQAYFDEVRPGQRVRAV
PGAGLKVPLWLLGSSLFGAQLAAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSEQLDRPHVMLGLNVFAAETDAEARRL
FSSLQQQFLALVRGTPGQLKPPVDDIERLWDASEAEHIRRSLACSVVGDPATVREGIQRFVDDLRPDELMLTGQIYDHAA
RLRSFEIAADAMRALQPASSQTA

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=327, Percent_Identity=57.4923547400612, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 37403; Mature: 37403

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFPMTPYSLLDLSPIIEGSDATQAMRNTLSLAQHAERLGYRRFWLAEHHNMPGIASAA
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHH
TAVLIGYVANGTSTIRVGSGGIMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQA
HHHHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCHHH
TARALRRTLSHDSADSFPQDVEELQAYFDEVRPGQRVRAVPGAGLKVPLWLLGSSLFGAQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHH
LAAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSEQLDRPHVMLGLNVFAAETDAEARRL
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCEEEEECEEEECCCCHHHHHH
FSSLQQQFLALVRGTPGQLKPPVDDIERLWDASEAEHIRRSLACSVVGDPATVREGIQRF
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VDDLRPDELMLTGQIYDHAARLRSFEIAADAMRALQPASSQTA
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQAFPMTPYSLLDLSPIIEGSDATQAMRNTLSLAQHAERLGYRRFWLAEHHNMPGIASAA
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHH
TAVLIGYVANGTSTIRVGSGGIMLPNHSPLVVAEQFGTLASLYPGRIDLGLGRAPGTDQA
HHHHHHHHCCCCCEEEECCCCEECCCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCCHHH
TARALRRTLSHDSADSFPQDVEELQAYFDEVRPGQRVRAVPGAGLKVPLWLLGSSLFGAQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCHHHHHH
LAAAMGLPFAFASHFAPGFMRQAVDLYRRTFRPSEQLDRPHVMLGLNVFAAETDAEARRL
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCEEEEECEEEECCCCHHHHHH
FSSLQQQFLALVRGTPGQLKPPVDDIERLWDASEAEHIRRSLACSVVGDPATVREGIQRF
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VDDLRPDELMLTGQIYDHAARLRSFEIAADAMRALQPASSQTA
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]