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The map label for this gene is 94314792

Identifier: 94314792

GI number: 94314792

Start: 69226

End: 69924

Strand: Direct

Name: 94314792

Synonym: Rmet_5873

Alternate gene names: NA

Gene position: 69226-69924 (Clockwise)

Preceding gene: 94314791

Following gene: 94314793

Centisome position: 2.68

GC content: 62.09

Gene sequence:

>699_bases
ATGATCATGCGCAGCCTGCTGTTGGCAGCCGCCACGCTGGCGGTGGCGCTGGGTGGCATCGCCGAAGCCCGCGCCGATAC
CATTCGCATTCCGGGCGATCAGGGCAACTCTTACACAGTGCCCGTGACCAGCCTGCGCGAAGCGCGCTTCCGCACGACCA
TCCGACAGCAATACGACTTCAGCTGCGGCTCGGCCGCCGTGGCCACGCTACTGACCTTTCAGTACGGATTCCCCGTCAAT
GAAGAGACGGTCTTCGCCAACATGTATGTCAACGGCGATCAGGCCAAGATCCGCTCGGAAGGATTCTCCCTGCTTGACAT
GAAGCGGTTCCTCGAGTCGCGCGGGTTCCTGGCCGACGGCTACGAGTTGCCGCTATCGAAGCTCGAGGAAGCGCAGATTC
CGGCGATCGTGCTGATCGTCGAGAACGGTTATCACCACTTCGTCGTGATCAAGGGGATCAAGGGCGACCGCGTGCTGATC
GGTGACCCCGCGCGCGGCACCCGCTCCATCGAGCGCGATCACTTCGAAAAGATCTGGGACAGCCAGTTGCTGTTCGTTAT
CCACAATCGCACGGACCGCGCGCGATTCAACCTGGCAGCCGACTGGCGCGTGGCGCCGTCGGGCCCTTACTGGATGGGAG
TTCCGCGAGACAGTCTGTTCTTCACCGTCATGCCAAAGCATGGCCCCGCCGATTTCTGA

Upstream 100 bases:

>100_bases
ACGGTTCGTTCGCCAATGCCGCGGGTTTGCCGACCGTGATCCAGAATTCGGGCAACAACGTACTGATCCAGAACGCGACC
ATCCTCAACGTCCAGTTCAA

Downstream 100 bases:

>100_bases
GCTGAGGAACATCATGGTCCAGACAACCATTTCACCCGCACCAAGATGCACGGCCAGGTCGACAACCGCGGCCGTGCTGC
TTGGCGCGGGGCTGGCCTGC

Product: peptidase (C39-family, bacteriocin processing)

Products: NA

Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic; Peptidase Family Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIMRSLLLAAATLAVALGGIAEARADTIRIPGDQGNSYTVPVTSLREARFRTTIRQQYDFSCGSAAVATLLTFQYGFPVN
EETVFANMYVNGDQAKIRSEGFSLLDMKRFLESRGFLADGYELPLSKLEEAQIPAIVLIVENGYHHFVVIKGIKGDRVLI
GDPARGTRSIERDHFEKIWDSQLLFVIHNRTDRARFNLAADWRVAPSGPYWMGVPRDSLFFTVMPKHGPADF

Sequences:

>Translated_232_residues
MIMRSLLLAAATLAVALGGIAEARADTIRIPGDQGNSYTVPVTSLREARFRTTIRQQYDFSCGSAAVATLLTFQYGFPVN
EETVFANMYVNGDQAKIRSEGFSLLDMKRFLESRGFLADGYELPLSKLEEAQIPAIVLIVENGYHHFVVIKGIKGDRVLI
GDPARGTRSIERDHFEKIWDSQLLFVIHNRTDRARFNLAADWRVAPSGPYWMGVPRDSLFFTVMPKHGPADF
>Mature_232_residues
MIMRSLLLAAATLAVALGGIAEARADTIRIPGDQGNSYTVPVTSLREARFRTTIRQQYDFSCGSAAVATLLTFQYGFPVN
EETVFANMYVNGDQAKIRSEGFSLLDMKRFLESRGFLADGYELPLSKLEEAQIPAIVLIVENGYHHFVVIKGIKGDRVLI
GDPARGTRSIERDHFEKIWDSQLLFVIHNRTDRARFNLAADWRVAPSGPYWMGVPRDSLFFTVMPKHGPADF

Specific function: Unknown

COG id: COG3271

COG function: function code R; Predicted double-glycine peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25959; Mature: 25959

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50990 PEPTIDASE_C39

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMRSLLLAAATLAVALGGIAEARADTIRIPGDQGNSYTVPVTSLREARFRTTIRQQYDF
CHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
SCGSAAVATLLTFQYGFPVNEETVFANMYVNGDQAKIRSEGFSLLDMKRFLESRGFLADG
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCEECC
YELPLSKLEEAQIPAIVLIVENGYHHFVVIKGIKGDRVLIGDPARGTRSIERDHFEKIWD
CCCCHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
SQLLFVIHNRTDRARFNLAADWRVAPSGPYWMGVPRDSLFFTVMPKHGPADF
CEEEEEEECCCCCEEEEEEECCEECCCCCEEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIMRSLLLAAATLAVALGGIAEARADTIRIPGDQGNSYTVPVTSLREARFRTTIRQQYDF
CHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCC
SCGSAAVATLLTFQYGFPVNEETVFANMYVNGDQAKIRSEGFSLLDMKRFLESRGFLADG
CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCEECC
YELPLSKLEEAQIPAIVLIVENGYHHFVVIKGIKGDRVLIGDPARGTRSIERDHFEKIWD
CCCCHHHHHHCCCCEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHC
SQLLFVIHNRTDRARFNLAADWRVAPSGPYWMGVPRDSLFFTVMPKHGPADF
CEEEEEEECCCCCEEEEEEECCEECCCCCEEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA