| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314785
Identifier: 94314785
GI number: 94314785
Start: 61850
End: 62632
Strand: Direct
Name: 94314785
Synonym: Rmet_5866
Alternate gene names: NA
Gene position: 61850-62632 (Clockwise)
Preceding gene: 291481473
Following gene: 94314790
Centisome position: 2.4
GC content: 68.07
Gene sequence:
>783_bases ATGAGTCTTCCGCCATGTTTTGCCAACCGCCGCGAGGCGGGCCAGTACCTCGGTCGTCATCTGGCCGCGCTTGGCTATTC CCGGTCACATGATGGCGATCCGGCACTTGTGCTGGCCTTGCCACGCGGTGGCGTTCCCGTTGCCTACGAAGTCGCACGCA TGCTCGACGCGACACTTGATGTGCTGCTCGTGCGCAAGATTGGCGCGCCCGGCTATCCGGAACTGGCGCTTGGTGCCGTG GTCGAGGGCGATGCCGGTGGCAGCGGGCCGCATACGGTCGTCAACGACGACCCGTGGGCACGCCGCGCGCTGGAGTCTGG CGCGTTCGATGCGGAACGCGGCCGTCAGCTTGGCGAGATCTGCCGTCGACAGCAGCGGTATCGCCAGGGGCACCCCGTTA CCGCGATGGCGGGCCGGCGCGTGATCGTTGTCGATGATGGCGTGGCTACCGGCGCGACGATGCGTGCGGCGCTCGATGCC GTGCGCATGGCGGGTGCCGCGGAGGTCGTGGCGGCGGTGCCGGTGGGATCCGTGGATGGCCTCGACACGCTCCGCGCCGT GGCGGATCGCGTGGTCTGCCTGAATATCCCCGAAAACTTTGGCGCGGTCGGCGCGTTCTATCTCGATTTCACGCAGACCT CGGATGACGAGGCGCTGTCGCTGCTGCGCGAGGCCGCTGCCGTCGCACCGCCCCTGGCCACGCATGGTGCCTGGTCGCGC AATGGTGGTGTGTCAGGAGGTGGTGAGTCAGGACACCTCAGCAACGGGCCGGCTGCCCACTGA
Upstream 100 bases:
>100_bases AAAGCGCCGCCGGGCTGTTCGGCCAGGACTATAGTGGCTGTGGAGCCGCGCCCGGCGCGGTTTGCAACCCATCTTTCCTG CCAGCCTGGGGGAGCCCGTC
Downstream 100 bases:
>100_bases CACCAGGGTCTCAGACTTTATTGAGGCGGGCTTTGAGGTGCGGCACCAGCCCGCCCGCGTGCAACAGCGCGCGCAGGAAA TCGGGCACCGGTTCGCAGGA
Product: phosphoribosyltransferase like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSLPPCFANRREAGQYLGRHLAALGYSRSHDGDPALVLALPRGGVPVAYEVARMLDATLDVLLVRKIGAPGYPELALGAV VEGDAGGSGPHTVVNDDPWARRALESGAFDAERGRQLGEICRRQQRYRQGHPVTAMAGRRVIVVDDGVATGATMRAALDA VRMAGAAEVVAAVPVGSVDGLDTLRAVADRVVCLNIPENFGAVGAFYLDFTQTSDDEALSLLREAAAVAPPLATHGAWSR NGGVSGGGESGHLSNGPAAH
Sequences:
>Translated_260_residues MSLPPCFANRREAGQYLGRHLAALGYSRSHDGDPALVLALPRGGVPVAYEVARMLDATLDVLLVRKIGAPGYPELALGAV VEGDAGGSGPHTVVNDDPWARRALESGAFDAERGRQLGEICRRQQRYRQGHPVTAMAGRRVIVVDDGVATGATMRAALDA VRMAGAAEVVAAVPVGSVDGLDTLRAVADRVVCLNIPENFGAVGAFYLDFTQTSDDEALSLLREAAAVAPPLATHGAWSR NGGVSGGGESGHLSNGPAAH >Mature_259_residues SLPPCFANRREAGQYLGRHLAALGYSRSHDGDPALVLALPRGGVPVAYEVARMLDATLDVLLVRKIGAPGYPELALGAVV EGDAGGSGPHTVVNDDPWARRALESGAFDAERGRQLGEICRRQQRYRQGHPVTAMAGRRVIVVDDGVATGATMRAALDAV RMAGAAEVVAAVPVGSVDGLDTLRAVADRVVCLNIPENFGAVGAFYLDFTQTSDDEALSLLREAAAVAPPLATHGAWSRN GGVSGGGESGHLSNGPAAH
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 26949; Mature: 26817
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPPCFANRREAGQYLGRHLAALGYSRSHDGDPALVLALPRGGVPVAYEVARMLDATLD CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH VLLVRKIGAPGYPELALGAVVEGDAGGSGPHTVVNDDPWARRALESGAFDAERGRQLGEI HHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH CRRQQRYRQGHPVTAMAGRRVIVVDDGVATGATMRAALDAVRMAGAAEVVAAVPVGSVDG HHHHHHHHCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCC LDTLRAVADRVVCLNIPENFGAVGAFYLDFTQTSDDEALSLLREAAAVAPPLATHGAWSR HHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCCC NGGVSGGGESGHLSNGPAAH CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLPPCFANRREAGQYLGRHLAALGYSRSHDGDPALVLALPRGGVPVAYEVARMLDATLD CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH VLLVRKIGAPGYPELALGAVVEGDAGGSGPHTVVNDDPWARRALESGAFDAERGRQLGEI HHHHHHHCCCCCCCHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH CRRQQRYRQGHPVTAMAGRRVIVVDDGVATGATMRAALDAVRMAGAAEVVAAVPVGSVDG HHHHHHHHCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCCC LDTLRAVADRVVCLNIPENFGAVGAFYLDFTQTSDDEALSLLREAAAVAPPLATHGAWSR HHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCCC NGGVSGGGESGHLSNGPAAH CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]