| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314765
Identifier: 94314765
GI number: 94314765
Start: 38779
End: 40389
Strand: Direct
Name: 94314765
Synonym: Rmet_5846
Alternate gene names: NA
Gene position: 38779-40389 (Clockwise)
Preceding gene: 94314764
Following gene: 94314767
Centisome position: 1.5
GC content: 64.31
Gene sequence:
>1611_bases ATGCCCAATCTTCGACGCAGTTTTCTGGCAACGCTTGGCGCCCTGACCGGCGCGGGCGTGGCCACCGCCGCCGGTGCGCG CGATCTGGGTGCTCCAGCCAACCCGAAGTCAGACGCCGCGGAGAAGGTGGTGTCCGTTGCCGACTTTCCGGGGCTGGACG GCACCGGAAAGTCGCCTTCGGATGAGGCTTTCCGCGCAGCGCTGCAAGCCGTAGCCGGCCAGGTGCATGCGCCGGCATTC GGCGAGAACCCGAACAACATCGGCGGCGCGCGAATCGTCGTGCCTCGCGGCACCTATCTGCTGACCAGGCCCGGCGTGCT GTTCAATGCCAGGCAGTTTCCCAGCCGCACATGCGGCTTCACGATCGAGGGCGATGGCCCGCCGGGCACCGTTGTCATCC TCTACAAGCCGGGCCGCGACGGCTCGGGGGCGTTGTTCAACAACCAGGACAAGGCGCTGGGCGTGCGGCTGCGCAACCTG CAATTCCATGGCATGGACGCCAGGAGCGACCTGATCACGAGCGTGAGTTCCGGCGGCGCGCAGGACTATGCCTTCGACGA TTGCATGTTCACCGGAACGTGGCGCTACGGCGTTGACCTGACCGGTGACAACTGCAATAGCGAGTGGAAGTTCTGGCGCT GCACCTGGGCCGGCACGTGGGATTCGTTCCTGCACGTGGGCGAGAAAAACACGTCAGACCAGTTCCTGAACTACTGGTTC GAGCATTGCCGGTACTGGTGCTCCAGCCCATGGATCGACATGCGCCGAGGCGGCCATATCAAGCTGACCGACTGCGATGT GAGCGGCTACGAGCCGTCGACACAGACGTACCTGTTCAATCTGCGCGGCAACAACCATGCAATGGGTGTCTGCTCGTTCA AGGCCCACGGTTTGCGAGTGGAGCAGAAGTCGCGCAACGCCGGCCTGATGCTGTGCGAATGGGAGCAGGGCAATATCGGC TTTCGGGAATGCGATTTCGGCTCGCAGGGGTTTCGCCCGTTTGCGGCCGATACCGTTTCCGCAGTGTTTTCACCGGGCAA CACGGCGGGCGCGCAAGTCGTGTTCGACAATTGCCAGATCATGGGACGCCACCAGTATGTCTCGGGCAACACGCCGGCTG CGCAGGGGCGGGCGGTCTATCGCAACTGCGATTTCGTGAACTACACCTATCCCGACGAAGCATTGATGTTCTCGGAGGCC AACAACCTCGCTGGCAATCGCCGCGTGGTGACGCTGGAAGGCTGCCGTGGCAAGGGGGCGGCGAACGTGTATGCCGATGC CGAGATTGGCTGGCACGTGGCCGCATCGGCCGCCGTCAGGACCAAGGTCATGGCACTCAGGGTGGCGCGTGGCCAGCGTG GGTCCATGCCGACGGCGATCCTGCCGCTCAATGCGGTCGTCACGCGCGTCGTCTTCGATACCGCGGGCGACAGGGGGAGC TACGCCATCGTGAGCGGCGATGCCACCAAACTGTCCGTATTCAAGGCAAGCGGGCCGGCCGAGGAACGGCTGCCTTTCCG CTGCAACACGCGGCAGCGCTGCACGCTGACCCTCACGCCCGGGTCGGACCCGGGCACAGAGGTTGTGGCACTGATCGAAT ACATCGGCTAG
Upstream 100 bases:
>100_bases GCCCGAGGCAGCCATATCGTTCACGCCAGTGACCCAGCGCGCGGCGTAGACCGCGCGGGGCAGGCACCAACGCTTCCCAA ACAGGAACGGGAACTCATCG
Downstream 100 bases:
>100_bases GCGGCGATCAGCCGCCGCGTTCAAAGCTTGGCGCGACGGGCGAGCAGGTTCCAGTAGCGTACCGGGAACAGTCTTTCGAG CCACGACATCACGACCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MPNLRRSFLATLGALTGAGVATAAGARDLGAPANPKSDAAEKVVSVADFPGLDGTGKSPSDEAFRAALQAVAGQVHAPAF GENPNNIGGARIVVPRGTYLLTRPGVLFNARQFPSRTCGFTIEGDGPPGTVVILYKPGRDGSGALFNNQDKALGVRLRNL QFHGMDARSDLITSVSSGGAQDYAFDDCMFTGTWRYGVDLTGDNCNSEWKFWRCTWAGTWDSFLHVGEKNTSDQFLNYWF EHCRYWCSSPWIDMRRGGHIKLTDCDVSGYEPSTQTYLFNLRGNNHAMGVCSFKAHGLRVEQKSRNAGLMLCEWEQGNIG FRECDFGSQGFRPFAADTVSAVFSPGNTAGAQVVFDNCQIMGRHQYVSGNTPAAQGRAVYRNCDFVNYTYPDEALMFSEA NNLAGNRRVVTLEGCRGKGAANVYADAEIGWHVAASAAVRTKVMALRVARGQRGSMPTAILPLNAVVTRVVFDTAGDRGS YAIVSGDATKLSVFKASGPAEERLPFRCNTRQRCTLTLTPGSDPGTEVVALIEYIG
Sequences:
>Translated_536_residues MPNLRRSFLATLGALTGAGVATAAGARDLGAPANPKSDAAEKVVSVADFPGLDGTGKSPSDEAFRAALQAVAGQVHAPAF GENPNNIGGARIVVPRGTYLLTRPGVLFNARQFPSRTCGFTIEGDGPPGTVVILYKPGRDGSGALFNNQDKALGVRLRNL QFHGMDARSDLITSVSSGGAQDYAFDDCMFTGTWRYGVDLTGDNCNSEWKFWRCTWAGTWDSFLHVGEKNTSDQFLNYWF EHCRYWCSSPWIDMRRGGHIKLTDCDVSGYEPSTQTYLFNLRGNNHAMGVCSFKAHGLRVEQKSRNAGLMLCEWEQGNIG FRECDFGSQGFRPFAADTVSAVFSPGNTAGAQVVFDNCQIMGRHQYVSGNTPAAQGRAVYRNCDFVNYTYPDEALMFSEA NNLAGNRRVVTLEGCRGKGAANVYADAEIGWHVAASAAVRTKVMALRVARGQRGSMPTAILPLNAVVTRVVFDTAGDRGS YAIVSGDATKLSVFKASGPAEERLPFRCNTRQRCTLTLTPGSDPGTEVVALIEYIG >Mature_535_residues PNLRRSFLATLGALTGAGVATAAGARDLGAPANPKSDAAEKVVSVADFPGLDGTGKSPSDEAFRAALQAVAGQVHAPAFG ENPNNIGGARIVVPRGTYLLTRPGVLFNARQFPSRTCGFTIEGDGPPGTVVILYKPGRDGSGALFNNQDKALGVRLRNLQ FHGMDARSDLITSVSSGGAQDYAFDDCMFTGTWRYGVDLTGDNCNSEWKFWRCTWAGTWDSFLHVGEKNTSDQFLNYWFE HCRYWCSSPWIDMRRGGHIKLTDCDVSGYEPSTQTYLFNLRGNNHAMGVCSFKAHGLRVEQKSRNAGLMLCEWEQGNIGF RECDFGSQGFRPFAADTVSAVFSPGNTAGAQVVFDNCQIMGRHQYVSGNTPAAQGRAVYRNCDFVNYTYPDEALMFSEAN NLAGNRRVVTLEGCRGKGAANVYADAEIGWHVAASAAVRTKVMALRVARGQRGSMPTAILPLNAVVTRVVFDTAGDRGSY AIVSGDATKLSVFKASGPAEERLPFRCNTRQRCTLTLTPGSDPGTEVVALIEYIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57842; Mature: 57711
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLRRSFLATLGALTGAGVATAAGARDLGAPANPKSDAAEKVVSVADFPGLDGTGKSPS CCCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC DEAFRAALQAVAGQVHAPAFGENPNNIGGARIVVPRGTYLLTRPGVLFNARQFPSRTCGF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCCE TIEGDGPPGTVVILYKPGRDGSGALFNNQDKALGVRLRNLQFHGMDARSDLITSVSSGGA EEECCCCCCEEEEEECCCCCCCCCEECCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCCC QDYAFDDCMFTGTWRYGVDLTGDNCNSEWKFWRCTWAGTWDSFLHVGEKNTSDQFLNYWF CCCEECCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHH EHCRYWCSSPWIDMRRGGHIKLTDCDVSGYEPSTQTYLFNLRGNNHAMGVCSFKAHGLRV HHHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEE EQKSRNAGLMLCEWEQGNIGFRECDFGSQGFRPFAADTVSAVFSPGNTAGAQVVFDNCQI EECCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECEEE MGRHQYVSGNTPAAQGRAVYRNCDFVNYTYPDEALMFSEANNLAGNRRVVTLEGCRGKGA EEEEEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCC ANVYADAEIGWHVAASAAVRTKVMALRVARGQRGSMPTAILPLNAVVTRVVFDTAGDRGS CEEEECCCCCEEEEHHHHHHHHEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC YAIVSGDATKLSVFKASGPAEERLPFRCNTRQRCTLTLTPGSDPGTEVVALIEYIG EEEEECCCEEEEEEECCCCHHHCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure PNLRRSFLATLGALTGAGVATAAGARDLGAPANPKSDAAEKVVSVADFPGLDGTGKSPS CCHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC DEAFRAALQAVAGQVHAPAFGENPNNIGGARIVVPRGTYLLTRPGVLFNARQFPSRTCGF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCCE TIEGDGPPGTVVILYKPGRDGSGALFNNQDKALGVRLRNLQFHGMDARSDLITSVSSGGA EEECCCCCCEEEEEECCCCCCCCCEECCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCCC QDYAFDDCMFTGTWRYGVDLTGDNCNSEWKFWRCTWAGTWDSFLHVGEKNTSDQFLNYWF CCCEECCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHHHHHH EHCRYWCSSPWIDMRRGGHIKLTDCDVSGYEPSTQTYLFNLRGNNHAMGVCSFKAHGLRV HHHHHHHCCCCEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEE EQKSRNAGLMLCEWEQGNIGFRECDFGSQGFRPFAADTVSAVFSPGNTAGAQVVFDNCQI EECCCCCCEEEEEECCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECEEE MGRHQYVSGNTPAAQGRAVYRNCDFVNYTYPDEALMFSEANNLAGNRRVVTLEGCRGKGA EEEEEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCC ANVYADAEIGWHVAASAAVRTKVMALRVARGQRGSMPTAILPLNAVVTRVVFDTAGDRGS CEEEECCCCCEEEEHHHHHHHHEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC YAIVSGDATKLSVFKASGPAEERLPFRCNTRQRCTLTLTPGSDPGTEVVALIEYIG EEEEECCCEEEEEEECCCCHHHCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA