| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is epsB1 [H]
Identifier: 94314763
GI number: 94314763
Start: 34430
End: 36772
Strand: Direct
Name: epsB1 [H]
Synonym: Rmet_5844
Alternate gene names: 94314763
Gene position: 34430-36772 (Clockwise)
Preceding gene: 94314762
Following gene: 94314764
Centisome position: 1.33
GC content: 67.73
Gene sequence:
>2343_bases GTGAGCACCATGTCATCTGCCGGCGCGATGCCGGCGCCAGGGAGCAGCGCCACGCGCAAGGGGGGGCGCCATTTGCGCGC ATGGATGGACCATGCTGGCTGGATTGTCGCGGCTGGCGTCATTGGTGCCACGATTGCCGCGATGATCGGCATTTCCCGTC CCAATCTCTACGATGCCCACACGCTCGTGCAGATCTATCAGAAGGGTGACGGCTCGGGCACCACGCAGCGCACCGAACCG TTCGACGTGGGGATGCTGCGCAGCCGCGCCGTGGTCGGCCCGGTGGTGGAGCGCCTGCGCCTGTACATCTCCGTCGAGCC GCTGCGCGCGCCATTGCTGGGCGGCGTGGCCGCGCACTTCGCGCAGGCGGGCAAGCTCCGGGGACCGTGGCCGGAGCGGC TCGGTTACGCGTGGGGCGGCGAGCGGGTCGACATCCGCACCCTGGACGTGCCGGAGCGCCTGCTCAACGTGCCAATGACG CTCGAAGTGTTGCCTGGGGATGCCTATCGCCTGACGCTCGACGGCGAGCTCGTGACCGATGGCAAGATCGGCAGCCGTGT CGAAGAGAATGGCGTGTCCATCCTGGTGTCGCGCATCGACGCGCGCGCGGGCACGCGATTCACTGTCACACGGCACGACA CGGCGCAGACGATCGATACCGTGGCGCGTGAACTGCGCATCGGCAGCGATGGCAGCGATACCAGCACGGTACGCATCGCG TGGCAGAGCAGTGACCGCACCGCGGTAGCCGCGCTGATCAACGGCATCGCCGATTCCTACATTACCGGACAGGCCGAGAC GCGCCGCGACGAGGCAGCCTCCACGCTGGCCTTCCTGAGCGGCGAACTGCCGCGTGTCAAGGACGAGCTCGAACGCGCCG AGGCGGCGCTCACGCGCTACCGCTCGCGCACGGGATCGATGCAGCCGAGCCAGGACGCCCAGTCGTACCTGAACAGCAGC ATCGATTACCAGAAGCAGATCGCCCAGCTCAAGCTCGACCGCACCAAGCTGCTGCAGCGCTTTACGGAAGAGTCGAACGA AGTACGAACGATGGACAGCCAGATCCAGCAGCTCACGCGGGACCGCAAGGAGCTGGATACCCGGATGCAGACGCTGTCGG TCTCCGAGCGCGAGTCCGTGGCCCTGACGCGTGACGTCAAGGTGGCCGAGGACATGTACATGTCCTTGCGCAACCGGCTC GAACAGCTCTCGCTGGCCAAGCTCGACAGCACCCGGCAGACCCGCGTGGTCGACATCGCGCTGACACCGGTCTCGCCAAT CGGCGTGGGCACCGCGCCGCTCACGATGGGCGGCGGGTTGCTGGGCATCTGCCTGGCGATGTGCGTGGTCTCGGTGCGCC AGCGCATGAAGCCGGCCGTGGCCACCGCCAATGATGCCGAGGAGACGCTTGGCCTGGCCATGCTCGGGGATGTCGCGTAC AGCCGCGAACAGGTGGAACTGGAGCGGCTGCTGACGGCGAAGGACCAGGATATCGGGACAATGCTGGCGCTGCAGGCGCC GGAGCCCGGGCGCCAGGTCGCGCAGGCGTTGCCGCATGGGGCCGGCGATGCCGAGCCGGGTCATTGGGGTTTGCATGATC AATACCTGCTGGCCCGCAACGCGCCGCATTCGATGGCCGTGGAGGGCCTGCGCAGCGTGCGCGCGGCACTGCATTTCCTG CGTCGCGAGGGCAGCAACAAGGTGGTGGCCGTGACCAGCCCCACCGCAGGGGCGGGCAAGACGTTTGTCTCGGTCAACCT GGCTGTGCTGTTCGCCGAAGCGGGCCAGCGCGTGTTGCTCGTCGATGCCGACCTGCGCCGAGGGCGGGTGTCGAGCTGGT TCGGCCAGCCGGCGGGTCCGGGTATGGCCGAAGTGCTGGCCGGCCGCGCCACGCTGGTCGACGCGGCACGGCCAACCGTC GTCAATGGGCTGTCGATCCTGCCTGCCGGCGCGCCGCCTACGAACCCGTCGGAACTGCTTATGCGTCCTGCCTTTGCGGA TTGCCTGCGTGCTGGTGCGGAGCGCTTCGACCTCGTCCTGATCGATACCCCGCCCGTTCTGGCGGTGGCGGATGCCATGC TCGTCGCCAATGTCGTGGGCGCGACGTTGCTCGTGCTGCGGGCCGATTCGACGCTGCCGTCGCAGGTCGAGGAAACCATC AAGCGCCTGACCCGCGCCGGGGCCAGTCTCTCGGGCGGCATTCTCAACGGCGTGATGCCGAAGCGCAGCAACCGCGTCGG CTTCGGCACCATGAATCCCTATCTCGGCATGCCCACGGTCATGCCAGCGGTCCGGCAGATTGCCCACGTCCCTGCCGTGG AAGACAAGACAACAACGAGCTGA
Upstream 100 bases:
>100_bases GACATCGTCAGAGTCGAGGACAACTACGGACGCAAGTAGTCCCGCAGCCTCCGGTGCGCCATGGCCACCGGGAGCCAGCC AGGCGTCAGGGGAGTATTAC
Downstream 100 bases:
>100_bases CGGGCCTGGCCCGGCGGGGTGCGTACCCGTTTCTGCGGACGCCGGTCTGGGCGACATCGCGGAGGCGGGCTGGCGTGGGC ACCCCGTCCATTGCAACGGG
Product: protein-tyrosine kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MSTMSSAGAMPAPGSSATRKGGRHLRAWMDHAGWIVAAGVIGATIAAMIGISRPNLYDAHTLVQIYQKGDGSGTTQRTEP FDVGMLRSRAVVGPVVERLRLYISVEPLRAPLLGGVAAHFAQAGKLRGPWPERLGYAWGGERVDIRTLDVPERLLNVPMT LEVLPGDAYRLTLDGELVTDGKIGSRVEENGVSILVSRIDARAGTRFTVTRHDTAQTIDTVARELRIGSDGSDTSTVRIA WQSSDRTAVAALINGIADSYITGQAETRRDEAASTLAFLSGELPRVKDELERAEAALTRYRSRTGSMQPSQDAQSYLNSS IDYQKQIAQLKLDRTKLLQRFTEESNEVRTMDSQIQQLTRDRKELDTRMQTLSVSERESVALTRDVKVAEDMYMSLRNRL EQLSLAKLDSTRQTRVVDIALTPVSPIGVGTAPLTMGGGLLGICLAMCVVSVRQRMKPAVATANDAEETLGLAMLGDVAY SREQVELERLLTAKDQDIGTMLALQAPEPGRQVAQALPHGAGDAEPGHWGLHDQYLLARNAPHSMAVEGLRSVRAALHFL RREGSNKVVAVTSPTAGAGKTFVSVNLAVLFAEAGQRVLLVDADLRRGRVSSWFGQPAGPGMAEVLAGRATLVDAARPTV VNGLSILPAGAPPTNPSELLMRPAFADCLRAGAERFDLVLIDTPPVLAVADAMLVANVVGATLLVLRADSTLPSQVEETI KRLTRAGASLSGGILNGVMPKRSNRVGFGTMNPYLGMPTVMPAVRQIAHVPAVEDKTTTS
Sequences:
>Translated_780_residues MSTMSSAGAMPAPGSSATRKGGRHLRAWMDHAGWIVAAGVIGATIAAMIGISRPNLYDAHTLVQIYQKGDGSGTTQRTEP FDVGMLRSRAVVGPVVERLRLYISVEPLRAPLLGGVAAHFAQAGKLRGPWPERLGYAWGGERVDIRTLDVPERLLNVPMT LEVLPGDAYRLTLDGELVTDGKIGSRVEENGVSILVSRIDARAGTRFTVTRHDTAQTIDTVARELRIGSDGSDTSTVRIA WQSSDRTAVAALINGIADSYITGQAETRRDEAASTLAFLSGELPRVKDELERAEAALTRYRSRTGSMQPSQDAQSYLNSS IDYQKQIAQLKLDRTKLLQRFTEESNEVRTMDSQIQQLTRDRKELDTRMQTLSVSERESVALTRDVKVAEDMYMSLRNRL EQLSLAKLDSTRQTRVVDIALTPVSPIGVGTAPLTMGGGLLGICLAMCVVSVRQRMKPAVATANDAEETLGLAMLGDVAY SREQVELERLLTAKDQDIGTMLALQAPEPGRQVAQALPHGAGDAEPGHWGLHDQYLLARNAPHSMAVEGLRSVRAALHFL RREGSNKVVAVTSPTAGAGKTFVSVNLAVLFAEAGQRVLLVDADLRRGRVSSWFGQPAGPGMAEVLAGRATLVDAARPTV VNGLSILPAGAPPTNPSELLMRPAFADCLRAGAERFDLVLIDTPPVLAVADAMLVANVVGATLLVLRADSTLPSQVEETI KRLTRAGASLSGGILNGVMPKRSNRVGFGTMNPYLGMPTVMPAVRQIAHVPAVEDKTTTS >Mature_779_residues STMSSAGAMPAPGSSATRKGGRHLRAWMDHAGWIVAAGVIGATIAAMIGISRPNLYDAHTLVQIYQKGDGSGTTQRTEPF DVGMLRSRAVVGPVVERLRLYISVEPLRAPLLGGVAAHFAQAGKLRGPWPERLGYAWGGERVDIRTLDVPERLLNVPMTL EVLPGDAYRLTLDGELVTDGKIGSRVEENGVSILVSRIDARAGTRFTVTRHDTAQTIDTVARELRIGSDGSDTSTVRIAW QSSDRTAVAALINGIADSYITGQAETRRDEAASTLAFLSGELPRVKDELERAEAALTRYRSRTGSMQPSQDAQSYLNSSI DYQKQIAQLKLDRTKLLQRFTEESNEVRTMDSQIQQLTRDRKELDTRMQTLSVSERESVALTRDVKVAEDMYMSLRNRLE QLSLAKLDSTRQTRVVDIALTPVSPIGVGTAPLTMGGGLLGICLAMCVVSVRQRMKPAVATANDAEETLGLAMLGDVAYS REQVELERLLTAKDQDIGTMLALQAPEPGRQVAQALPHGAGDAEPGHWGLHDQYLLARNAPHSMAVEGLRSVRAALHFLR REGSNKVVAVTSPTAGAGKTFVSVNLAVLFAEAGQRVLLVDADLRRGRVSSWFGQPAGPGMAEVLAGRATLVDAARPTVV NGLSILPAGAPPTNPSELLMRPAFADCLRAGAERFDLVLIDTPPVLAVADAMLVANVVGATLLVLRADSTLPSQVEETIK RLTRAGASLSGGILNGVMPKRSNRVGFGTMNPYLGMPTVMPAVRQIAHVPAVEDKTTTS
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=758, Percent_Identity=28.1002638522427, Blast_Score=313, Evalue=3e-86, Organism=Escherichia coli, GI1787216, Length=727, Percent_Identity=27.5103163686382, Blast_Score=285, Evalue=7e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 83725; Mature: 83594
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00027 HOMEOBOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMSSAGAMPAPGSSATRKGGRHLRAWMDHAGWIVAAGVIGATIAAMIGISRPNLYDAH CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH TLVQIYQKGDGSGTTQRTEPFDVGMLRSRAVVGPVVERLRLYISVEPLRAPLLGGVAAHF HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHH AQAGKLRGPWPERLGYAWGGERVDIRTLDVPERLLNVPMTLEVLPGDAYRLTLDGELVTD HHCCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHCCCEEEEEECCCEEEEEECCEEEEC GKIGSRVEENGVSILVSRIDARAGTRFTVTRHDTAQTIDTVARELRIGSDGSDTSTVRIA CCCCCCHHHCCCEEEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEE WQSSDRTAVAALINGIADSYITGQAETRRDEAASTLAFLSGELPRVKDELERAEAALTRY EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RSRTGSMQPSQDAQSYLNSSIDYQKQIAQLKLDRTKLLQRFTEESNEVRTMDSQIQQLTR HHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH DRKELDTRMQTLSVSERESVALTRDVKVAEDMYMSLRNRLEQLSLAKLDSTRQTRVVDIA HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE LTPVSPIGVGTAPLTMGGGLLGICLAMCVVSVRQRMKPAVATANDAEETLGLAMLGDVAY ECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH SREQVELERLLTAKDQDIGTMLALQAPEPGRQVAQALPHGAGDAEPGHWGLHDQYLLARN HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC APHSMAVEGLRSVRAALHFLRREGSNKVVAVTSPTAGAGKTFVSVNLAVLFAEAGQRVLL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHEEEEECCCCEEEE VDADLRRGRVSSWFGQPAGPGMAEVLAGRATLVDAARPTVVNGLSILPAGAPPTNPSELL EECCCCCCCHHHHCCCCCCCCHHHHHCCCHHHHHCCCCHHHCCCEEEECCCCCCCHHHHH MRPAFADCLRAGAERFDLVLIDTPPVLAVADAMLVANVVGATLLVLRADSTLPSQVEETI HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH KRLTRAGASLSGGILNGVMPKRSNRVGFGTMNPYLGMPTVMPAVRQIAHVPAVEDKTTTS HHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure STMSSAGAMPAPGSSATRKGGRHLRAWMDHAGWIVAAGVIGATIAAMIGISRPNLYDAH CCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH TLVQIYQKGDGSGTTQRTEPFDVGMLRSRAVVGPVVERLRLYISVEPLRAPLLGGVAAHF HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHH AQAGKLRGPWPERLGYAWGGERVDIRTLDVPERLLNVPMTLEVLPGDAYRLTLDGELVTD HHCCCCCCCCHHHCCCCCCCCEEEEEECCCCHHHHCCCEEEEEECCCEEEEEECCEEEEC GKIGSRVEENGVSILVSRIDARAGTRFTVTRHDTAQTIDTVARELRIGSDGSDTSTVRIA CCCCCCHHHCCCEEEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEE WQSSDRTAVAALINGIADSYITGQAETRRDEAASTLAFLSGELPRVKDELERAEAALTRY EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RSRTGSMQPSQDAQSYLNSSIDYQKQIAQLKLDRTKLLQRFTEESNEVRTMDSQIQQLTR HHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH DRKELDTRMQTLSVSERESVALTRDVKVAEDMYMSLRNRLEQLSLAKLDSTRQTRVVDIA HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE LTPVSPIGVGTAPLTMGGGLLGICLAMCVVSVRQRMKPAVATANDAEETLGLAMLGDVAY ECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHH SREQVELERLLTAKDQDIGTMLALQAPEPGRQVAQALPHGAGDAEPGHWGLHDQYLLARN HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEECC APHSMAVEGLRSVRAALHFLRREGSNKVVAVTSPTAGAGKTFVSVNLAVLFAEAGQRVLL CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHEEEEECCCCEEEE VDADLRRGRVSSWFGQPAGPGMAEVLAGRATLVDAARPTVVNGLSILPAGAPPTNPSELL EECCCCCCCHHHHCCCCCCCCHHHHHCCCHHHHHCCCCHHHCCCEEEECCCCCCCHHHHH MRPAFADCLRAGAERFDLVLIDTPPVLAVADAMLVANVVGATLLVLRADSTLPSQVEETI HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH KRLTRAGASLSGGILNGVMPKRSNRVGFGTMNPYLGMPTVMPAVRQIAHVPAVEDKTTTS HHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]