Click here to switch to the map view.

The map label for this gene is 94314759

Identifier: 94314759

GI number: 94314759

Start: 27667

End: 30237

Strand: Direct

Name: 94314759

Synonym: Rmet_5840

Alternate gene names: NA

Gene position: 27667-30237 (Clockwise)

Preceding gene: 94314758

Following gene: 94314760

Centisome position: 1.07

GC content: 67.21

Gene sequence:

>2571_bases
ATGACTGCGCGCGATCCGGAGCCGGCTCTGCTGCCGGTATTGCGCCCGGGTGTAGCCGTGGGCGATGCGCGGCTTGAAGG
CGACTGGACCCTGCTGGAAACCTTCGCGAACGCGGTCGCGCATCCGGGCGAGCTCGATGATGGCGGTCACTGGCTGCCGG
CACCGGTGCCGGGTACCGTCGCGAGCGCCTTGCGTGCCGCAGGCCGCTGGGATGAGGCTGCGCCGCCGCCACTGCATCAG
CATGACTACTGGTACAAGCTTCGATTCCAGGGCGACGGACGCCGGCTGCTGCGCTTCAATGGTCTGGCGACATTGGCCGA
GGTCTGGTTCAACGGCACGAAGGTGCTGACCGTGCGGCACATGTTCACCGCCCACCAGGTGGAAGTGGAACTGGCCGGCG
ACAACGTGCTGCACCTTTGCTTCCGCGCGATGCACCCGTGGCTGCGCACGCAGCGCGGGCCGGTGCGTTGGAAGCCGCGC
ATGATCGTGCCGCCGACGCTGCGTGCGGTACGCACCACGCTGCTTGGTCATATGCCCGGCTGGTGCCCGCCCGTTCATGC
GGTGGGGCCATGGCGCGACATCGAACTGCTCGACCCGATGGGCGCCGATGTCACACACGGCGTGCGCGCCGAGTTGTCGA
GTCATCTGGATGGTGATGACGGCGTCGTGGTGCTTCAGTTGCACTTTCCGGGTCCGGCGCCAGAGCAGGGAACGTTCGCG
GCCATCGGCCCCGACCACGCAGTGTGGCAAGGCGAACTGCGCCGCGTCGGCGGGCATACGCTTGCGGGCACGCTGCGCGT
GGCGCAGGCGCAGCGCTGGTGGCCGCATACGCATGGTGAACCCGCCCTGTACCGCGTCGAGGCGAGTATCGGCGCGCTTG
GGATCGCGTGTGGGCATACTGGCTTCCGCACGATTACCGAGGACCGCTCCGGCGACGACGGCGCGTTCGCGCTGCGCGTC
AATGGCGAGCGCGTGTTCTGCCGTGGCGCCTGTGTGTCGAGTCACGATCTTCCGGGGCTGGCGGATACGGACGCGTCCGT
GGCACGCTGGCTGCAACTCGCGCGCGATGCCGGGGCCAATATGGTTCGCGTCAGTGGCGTCACCTGCTATCCGGGAGAGG
CGTTCTATCGCCAGTGCGATGCGCTCGGCCTGATGGTCTGGCAGGACTTCATGTTCGCCAACTTCGACTATGGCAGCGAG
TCCAGCGCCAGCCCGGCGCTGATGGCCGATGCCGCGGGCGAAGTGGCGCAGTGGCTGACGTCCACGCGGGCGCACGCCAG
TCTGGCGGTGCTGTGCGGCGGCAGCGAGGCGGAACAGCAGGCCGCGATGATGGGAACGCCGCGCAACGTGTGGCGCCAGC
CCTTGTTCGACGAACTGATTCCGTCGCTCGTACGCGAGCATCGACCCGACGTGATCTACGTGCGTAATTCGCCGAGCGAG
GGCGCGTGGCCGTTCCAGCCCGATACGGGTGTCAGTCACTACTACGGCGTGGGCGCCTATCAGCGCCCGTTGTCCGATGC
GCGGATGGCCAACGTCCGTTTCACCTCGGAATGCCTGGCCTTTGCGAACGTGCCGTGCGGGCGCACACTTTCCGAGGCGG
GCCTGTTCCAACCGCTGCATGATCCCCGCTGGAAGGCACGTGTACCGCGCGACGCGGGCGCGGCGTGGGACTTCGAGGAC
ATCCGCGATTTCTATCTGCGCGATCTGTTCGATGTCGATCCACCCCGGCTGCGCTACGAGCAACCGGAACGATACCTGGC
GCTGTCGCGCGCGGTAGTGGCCGAGATCATGACGGAGGTCTTCGGCGAATGGCGCCGTGCGGGGTCCACGTGCCAGGGCG
GACTGGTGTGGCAGTTGCAGGATCTGGTGCCAGGCGCCGGATGGGGCATCGTCGATGCGCGCGCGAGGCCGAAGTCCGCA
TGGCATGCGTTGCGCCAGGTATGGCAGCCGCTGCAGGTCATCCTGACGGATGAAGGGTTGAATGGTCTGCACGCGCACGT
GATCAACGAATCCGCCACGCCTCGCACCGTATGTTTGACACTGCGCTGCCTGCGCGATGGCGAGGCGGTGGCGGCACGGG
CGGAGCAAACGCTCACATTGGCACCACGCGAGACACGCAGGCTGGGCGCGGCGGAGATGTTCGATCATTTCTTCGATTTC
ACCTACGCCTACCGGTTTGGCCCGCCTGCGCACGACGTGGTCATTGCCACGCTACACACAATGGATGAGGACAACGGGTT
GCTCAATCAGCCACCCGGTCCGCCGCTCAGTCAGTCGGTGTACCTCCCCGATCGCCGCGCCGCCGCGCTGCGCGAGCCGG
GGCTGCAGGCCAGCGTGGCGCGCGAAGGCGACCAATGGTGGCTCACGGTGGGCACGCGGCGCTTCGCGCGATGGGTTCAT
ATCGTGGACCATGCCATGCAGCCTGAGACCGACTGGTTCCACCTTGGCCCGGGTGAAACGCGGCGCATCCGCCTGATGCA
TGACGCTGGCGTCACCAGCGGCGCCAGCGCCATCCCTTCGGGCGAAGTTTCGGCACTCAATGCTTCCCGCCCGGTCAGCT
ACGACGGCTGA

Upstream 100 bases:

>100_bases
GCCACAAGCCCGACGGATGCCAGGATTGCCTGGCACAGCTCGAGGCAGCTTACCAGGGCACCGTGCCGGCATTGGCCGCG
TGCTTCGGGGAGACCGTCTC

Downstream 100 bases:

>100_bases
TCTCAACCTCCTTCATCCCACTTCAACCTTTCCCGCCAGCCCAACGCTGGCGCGGCGGGCGCATCTGGCACCGGCTGCGC
CCCGCGCGGGTGATGCCTAT

Product: Beta-mannosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Mannosidase; Glycoside Hydrolase; Glycosidase; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; O-Glycosyl Hydrolase; Beta-Mannosidase Man2A; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MTARDPEPALLPVLRPGVAVGDARLEGDWTLLETFANAVAHPGELDDGGHWLPAPVPGTVASALRAAGRWDEAAPPPLHQ
HDYWYKLRFQGDGRRLLRFNGLATLAEVWFNGTKVLTVRHMFTAHQVEVELAGDNVLHLCFRAMHPWLRTQRGPVRWKPR
MIVPPTLRAVRTTLLGHMPGWCPPVHAVGPWRDIELLDPMGADVTHGVRAELSSHLDGDDGVVVLQLHFPGPAPEQGTFA
AIGPDHAVWQGELRRVGGHTLAGTLRVAQAQRWWPHTHGEPALYRVEASIGALGIACGHTGFRTITEDRSGDDGAFALRV
NGERVFCRGACVSSHDLPGLADTDASVARWLQLARDAGANMVRVSGVTCYPGEAFYRQCDALGLMVWQDFMFANFDYGSE
SSASPALMADAAGEVAQWLTSTRAHASLAVLCGGSEAEQQAAMMGTPRNVWRQPLFDELIPSLVREHRPDVIYVRNSPSE
GAWPFQPDTGVSHYYGVGAYQRPLSDARMANVRFTSECLAFANVPCGRTLSEAGLFQPLHDPRWKARVPRDAGAAWDFED
IRDFYLRDLFDVDPPRLRYEQPERYLALSRAVVAEIMTEVFGEWRRAGSTCQGGLVWQLQDLVPGAGWGIVDARARPKSA
WHALRQVWQPLQVILTDEGLNGLHAHVINESATPRTVCLTLRCLRDGEAVAARAEQTLTLAPRETRRLGAAEMFDHFFDF
TYAYRFGPPAHDVVIATLHTMDEDNGLLNQPPGPPLSQSVYLPDRRAAALREPGLQASVAREGDQWWLTVGTRRFARWVH
IVDHAMQPETDWFHLGPGETRRIRLMHDAGVTSGASAIPSGEVSALNASRPVSYDG

Sequences:

>Translated_856_residues
MTARDPEPALLPVLRPGVAVGDARLEGDWTLLETFANAVAHPGELDDGGHWLPAPVPGTVASALRAAGRWDEAAPPPLHQ
HDYWYKLRFQGDGRRLLRFNGLATLAEVWFNGTKVLTVRHMFTAHQVEVELAGDNVLHLCFRAMHPWLRTQRGPVRWKPR
MIVPPTLRAVRTTLLGHMPGWCPPVHAVGPWRDIELLDPMGADVTHGVRAELSSHLDGDDGVVVLQLHFPGPAPEQGTFA
AIGPDHAVWQGELRRVGGHTLAGTLRVAQAQRWWPHTHGEPALYRVEASIGALGIACGHTGFRTITEDRSGDDGAFALRV
NGERVFCRGACVSSHDLPGLADTDASVARWLQLARDAGANMVRVSGVTCYPGEAFYRQCDALGLMVWQDFMFANFDYGSE
SSASPALMADAAGEVAQWLTSTRAHASLAVLCGGSEAEQQAAMMGTPRNVWRQPLFDELIPSLVREHRPDVIYVRNSPSE
GAWPFQPDTGVSHYYGVGAYQRPLSDARMANVRFTSECLAFANVPCGRTLSEAGLFQPLHDPRWKARVPRDAGAAWDFED
IRDFYLRDLFDVDPPRLRYEQPERYLALSRAVVAEIMTEVFGEWRRAGSTCQGGLVWQLQDLVPGAGWGIVDARARPKSA
WHALRQVWQPLQVILTDEGLNGLHAHVINESATPRTVCLTLRCLRDGEAVAARAEQTLTLAPRETRRLGAAEMFDHFFDF
TYAYRFGPPAHDVVIATLHTMDEDNGLLNQPPGPPLSQSVYLPDRRAAALREPGLQASVAREGDQWWLTVGTRRFARWVH
IVDHAMQPETDWFHLGPGETRRIRLMHDAGVTSGASAIPSGEVSALNASRPVSYDG
>Mature_855_residues
TARDPEPALLPVLRPGVAVGDARLEGDWTLLETFANAVAHPGELDDGGHWLPAPVPGTVASALRAAGRWDEAAPPPLHQH
DYWYKLRFQGDGRRLLRFNGLATLAEVWFNGTKVLTVRHMFTAHQVEVELAGDNVLHLCFRAMHPWLRTQRGPVRWKPRM
IVPPTLRAVRTTLLGHMPGWCPPVHAVGPWRDIELLDPMGADVTHGVRAELSSHLDGDDGVVVLQLHFPGPAPEQGTFAA
IGPDHAVWQGELRRVGGHTLAGTLRVAQAQRWWPHTHGEPALYRVEASIGALGIACGHTGFRTITEDRSGDDGAFALRVN
GERVFCRGACVSSHDLPGLADTDASVARWLQLARDAGANMVRVSGVTCYPGEAFYRQCDALGLMVWQDFMFANFDYGSES
SASPALMADAAGEVAQWLTSTRAHASLAVLCGGSEAEQQAAMMGTPRNVWRQPLFDELIPSLVREHRPDVIYVRNSPSEG
AWPFQPDTGVSHYYGVGAYQRPLSDARMANVRFTSECLAFANVPCGRTLSEAGLFQPLHDPRWKARVPRDAGAAWDFEDI
RDFYLRDLFDVDPPRLRYEQPERYLALSRAVVAEIMTEVFGEWRRAGSTCQGGLVWQLQDLVPGAGWGIVDARARPKSAW
HALRQVWQPLQVILTDEGLNGLHAHVINESATPRTVCLTLRCLRDGEAVAARAEQTLTLAPRETRRLGAAEMFDHFFDFT
YAYRFGPPAHDVVIATLHTMDEDNGLLNQPPGPPLSQSVYLPDRRAAALREPGLQASVAREGDQWWLTVGTRRFARWVHI
VDHAMQPETDWFHLGPGETRRIRLMHDAGVTSGASAIPSGEVSALNASRPVSYDG

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=727, Percent_Identity=21.3204951856946, Blast_Score=96, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17550784, Length=465, Percent_Identity=21.2903225806452, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24643840, Length=462, Percent_Identity=25.1082251082251, Blast_Score=85, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24643838, Length=462, Percent_Identity=25.1082251082251, Blast_Score=84, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94437; Mature: 94306

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARDPEPALLPVLRPGVAVGDARLEGDWTLLETFANAVAHPGELDDGGHWLPAPVPGTV
CCCCCCCCCCCCEECCCCEECCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
ASALRAAGRWDEAAPPPLHQHDYWYKLRFQGDGRRLLRFNGLATLAEVWFNGTKVLTVRH
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCEEEEEEEE
MFTAHQVEVELAGDNVLHLCFRAMHPWLRTQRGPVRWKPRMIVPPTLRAVRTTLLGHMPG
EHEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCC
WCPPVHAVGPWRDIELLDPMGADVTHGVRAELSSHLDGDDGVVVLQLHFPGPAPEQGTFA
CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEE
AIGPDHAVWQGELRRVGGHTLAGTLRVAQAQRWWPHTHGEPALYRVEASIGALGIACGHT
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC
GFRTITEDRSGDDGAFALRVNGERVFCRGACVSSHDLPGLADTDASVARWLQLARDAGAN
CCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
MVRVSGVTCYPGEAFYRQCDALGLMVWQDFMFANFDYGSESSASPALMADAAGEVAQWLT
EEEECCEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHH
STRAHASLAVLCGGSEAEQQAAMMGTPRNVWRQPLFDELIPSLVREHRPDVIYVRNSPSE
HHHCCCEEEEEECCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCC
GAWPFQPDTGVSHYYGVGAYQRPLSDARMANVRFTSECLAFANVPCGRTLSEAGLFQPLH
CCCCCCCCCCCCHHCCCCHHHCCCCCCHHCCEEEHHHHHHHHCCCCCCCHHHHCCCCCCC
DPRWKARVPRDAGAAWDFEDIRDFYLRDLFDVDPPRLRYEQPERYLALSRAVVAEIMTEV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGEWRRAGSTCQGGLVWQLQDLVPGAGWGIVDARARPKSAWHALRQVWQPLQVILTDEGL
HHHHHHCCCCCCCCEEEEEHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEECCCC
NGLHAHVINESATPRTVCLTLRCLRDGEAVAARAEQTLTLAPRETRRLGAAEMFDHFFDF
CCEEEEEECCCCCCCEEEEEHHHHCCCHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHHH
TYAYRFGPPAHDVVIATLHTMDEDNGLLNQPPGPPLSQSVYLPDRRAAALREPGLQASVA
HEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCHHH
REGDQWWLTVGTRRFARWVHIVDHAMQPETDWFHLGPGETRRIRLMHDAGVTSGASAIPS
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCC
GEVSALNASRPVSYDG
CCCEEECCCCCCCCCC
>Mature Secondary Structure 
TARDPEPALLPVLRPGVAVGDARLEGDWTLLETFANAVAHPGELDDGGHWLPAPVPGTV
CCCCCCCCCCCEECCCCEECCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
ASALRAAGRWDEAAPPPLHQHDYWYKLRFQGDGRRLLRFNGLATLAEVWFNGTKVLTVRH
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCEEEEEEEE
MFTAHQVEVELAGDNVLHLCFRAMHPWLRTQRGPVRWKPRMIVPPTLRAVRTTLLGHMPG
EHEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHCCCC
WCPPVHAVGPWRDIELLDPMGADVTHGVRAELSSHLDGDDGVVVLQLHFPGPAPEQGTFA
CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEE
AIGPDHAVWQGELRRVGGHTLAGTLRVAQAQRWWPHTHGEPALYRVEASIGALGIACGHT
EECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCC
GFRTITEDRSGDDGAFALRVNGERVFCRGACVSSHDLPGLADTDASVARWLQLARDAGAN
CCEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
MVRVSGVTCYPGEAFYRQCDALGLMVWQDFMFANFDYGSESSASPALMADAAGEVAQWLT
EEEECCEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHH
STRAHASLAVLCGGSEAEQQAAMMGTPRNVWRQPLFDELIPSLVREHRPDVIYVRNSPSE
HHHCCCEEEEEECCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCC
GAWPFQPDTGVSHYYGVGAYQRPLSDARMANVRFTSECLAFANVPCGRTLSEAGLFQPLH
CCCCCCCCCCCCHHCCCCHHHCCCCCCHHCCEEEHHHHHHHHCCCCCCCHHHHCCCCCCC
DPRWKARVPRDAGAAWDFEDIRDFYLRDLFDVDPPRLRYEQPERYLALSRAVVAEIMTEV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGEWRRAGSTCQGGLVWQLQDLVPGAGWGIVDARARPKSAWHALRQVWQPLQVILTDEGL
HHHHHHCCCCCCCCEEEEEHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEECCCC
NGLHAHVINESATPRTVCLTLRCLRDGEAVAARAEQTLTLAPRETRRLGAAEMFDHFFDF
CCEEEEEECCCCCCCEEEEEHHHHCCCHHHHHHCCCEEEECCHHHHHCCHHHHHHHHHHH
TYAYRFGPPAHDVVIATLHTMDEDNGLLNQPPGPPLSQSVYLPDRRAAALREPGLQASVA
HEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCHHH
REGDQWWLTVGTRRFARWVHIVDHAMQPETDWFHLGPGETRRIRLMHDAGVTSGASAIPS
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCC
GEVSALNASRPVSYDG
CCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA