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The map label for this gene is kpsF [C]

Identifier: 94314654

GI number: 94314654

Start: 2494891

End: 2495853

Strand: Direct

Name: kpsF [C]

Synonym: Rmet_5735

Alternate gene names: 94314654

Gene position: 2494891-2495853 (Clockwise)

Preceding gene: 94314653

Following gene: 94314655

Centisome position: 96.7

GC content: 60.54

Gene sequence:

>963_bases
ATGCCAGAGTCAATTTCTCTTGCAAAGCAAGTGGTAGCCACGGAAATCCGCGCGCTGGAGGCGATGAACGCACGCGTGAG
CGAGGATTTTGGGCGCACCGTGAAGTGCATCCTCAGCATGAAAGGCAGATTGGTCGTTGTCGGCATGGGGAAGTCCGGCC
TGATTGGCCGGAAGATTGCGGCCACCATGGCGTCGACGGGCACCCCGGCTTTCTCCGTACACGCTGGCGAGGCCTTTCAC
GGCGACCTCGGCATGATTCGCCCGACTGACGTCGTGCTGATGATCTCCAACAGCGGCGAGACGGAGGAGTTGGTACGCTT
GCTGCCGTTCCTCAGGCATCAGAACAACTACGTCATCGCCATGACCGGTAAGCCGGCGTCGACGCTGGGGAAGGCGGCAA
ATACGATTCTCGACATCAGCGTCGAGCGTGAGGCATGCAACAACAACCTGGCGCCAACCAGTTCCACGACGGCCGCGCTG
GTTATGGGAGACGCGCTGGCTGTCGTGCTGGCCTCTAAACGCGGCTTTCAGCCGGAGGACTTCGCACGATTTCACCCGGG
CGGCAGCCTCGGACGGCGCTTGCTTACGCGAGTAGCGGACGTCATGCATAAGGGTACGCTGCCCGTATGCACCGCACAGA
CGTCCTTCAAGGATGTGGTCCATGTCGTCAATCGGGGTCGTATGGGACTGGCCTTGGTCATGCAGGGAGAGCGCTTGCTC
GGCATCATTACCGATGGCGATATTCGCCGCGGATTCGACACTGTGCATGACTATCGCTCCATCCTCGCGGAAGACCTGAT
GACTACAAGGCCAAAGGCAATCGCACCGGATGCGCGCGTTGGTGACGCGGAGGCGCTGTTGCGCCAGGAGAAGATTGGCG
CATTGGTGGTGCAGGACATTGATGGCCGGGTCATTGGCATCTTCCAAATGCATGGAGCGGAAGAGGCGCCCGGCGTGCAC
TAG

Upstream 100 bases:

>100_bases
TGGTGTCGATACTCCCGCTTGCCTGGAGCGTGTCCGGGCCATTCTTGATCCCGCTGTTTGACGGCAGCTGAAGATCTACA
GACAAAAGGACAAACGGAAC

Downstream 100 bases:

>100_bases
AGGATCGTATGTCGATGAACGCTTGATTCCAAGTTTCGCACAGGATTTGCATGGTATTCGCGGTGGTCACTCCGGGCCTG
TGGCGCACGCCCGGGCTTCG

Product: D-arabinose 5-phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPESISLAKQVVATEIRALEAMNARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKIAATMASTGTPAFSVHAGEAFH
GDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVIAMTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAAL
VMGDALAVVLASKRGFQPEDFARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVMQGERLL
GIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVVQDIDGRVIGIFQMHGAEEAPGVH

Sequences:

>Translated_320_residues
MPESISLAKQVVATEIRALEAMNARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKIAATMASTGTPAFSVHAGEAFH
GDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVIAMTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAAL
VMGDALAVVLASKRGFQPEDFARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVMQGERLL
GIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVVQDIDGRVIGIFQMHGAEEAPGVH
>Mature_319_residues
PESISLAKQVVATEIRALEAMNARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKIAATMASTGTPAFSVHAGEAFHG
DLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVIAMTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAALV
MGDALAVVLASKRGFQPEDFARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVMQGERLLG
IITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVVQDIDGRVIGIFQMHGAEEAPGVH

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=305, Percent_Identity=45.5737704918033, Blast_Score=255, Evalue=2e-69,
Organism=Escherichia coli, GI87082151, Length=314, Percent_Identity=42.9936305732484, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34231; Mature: 34100

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESISLAKQVVATEIRALEAMNARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
ATMASTGTPAFSVHAGEAFHGDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVIA
HHHHCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
MTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAALVMGDALAVVLASKRGFQPED
ECCCCHHHHHHHHHEEEEEEEEHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHH
FARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVMQGERLL
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEEEEECCEEE
GIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVVQDI
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEC
DGRVIGIFQMHGAEEAPGVH
CCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
PESISLAKQVVATEIRALEAMNARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
ATMASTGTPAFSVHAGEAFHGDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVIA
HHHHCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
MTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAALVMGDALAVVLASKRGFQPED
ECCCCHHHHHHHHHEEEEEEEEHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHH
FARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVMQGERLL
HHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEEEEECCEEE
GIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVVQDI
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEC
DGRVIGIFQMHGAEEAPGVH
CCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]