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The map label for this gene is 94314630

Identifier: 94314630

GI number: 94314630

Start: 2470520

End: 2471986

Strand: Direct

Name: 94314630

Synonym: Rmet_5711

Alternate gene names: NA

Gene position: 2470520-2471986 (Clockwise)

Preceding gene: 94314629

Following gene: 94314631

Centisome position: 95.75

GC content: 62.37

Gene sequence:

>1467_bases
TTGATACGAGACTGGCGGAAGAGAACGCCGGAATCCGTAGATGCGATCGTTGCGCAGGCCGCGCTGGACGTGGAACTCGG
CGACACGGCAAGCGCAAGAACCGCTCTTGAACAGGTACTTGCCACAGTCCCGAATCACCCGCGGGCGCTGGCAGGCTTGG
CTCATCTGGCCCTGTGCGCCGGGGATGCGAAATCGGCCGTGGACTGGTTTCAGCAAACCGGCCCGGAAGCACTTGATGAA
GCTGAATTGTCCGATTGGTGCGAAGCACTTACGGCTACGGGCGACCTGACGCACGGCGCGGACATTGCCAGGCATCTTTG
CGAACGCGCACCCAAAGCCGCGACGTCCTGGTTTCAACTCGGGCTCACCCTGCATCACAGCGGCTTCCACGAGCAGGCAC
TGGATGCCTATCCCAAAGCACATGCGCTAGACCCTGACCTCGACAATCTCTGCAACAACATCGGCGCCGCATATCTGCAA
TCAGGCCGGACCGAAGAAGCCATGACACCGATCCGTCGGGCCATCGAGCTGAAGCCTTCCAATCCCCTGGCGTGGATCAA
CCTGTCGGATGCCTTGCTGAAACTGCGTCGCCCGGATGACGCCGCGTTGGCGGCCCGGCGCGCCTGCGCCCTGGCCCCAA
CGATGCCGCTCGCCTTGCAAGCGCAATCCAATGCGCTCAAGGACCTTGGCCAATGGGCAGATGCGCTGGCCCTGATGGAG
AAGGCAGCGATGCAGGCGCCAGTTTCGGGCGGCATCATCTGGAATCTCGCCATGCTACAAATGCTGCACGGCGACTATCG
CAATGGCCTGATCAATTTCGAACACCGCTGGGCTTCGCCAGAACTGGCGGGAACATTCCCGGATCTGAAGGCACCGATCC
GGCGTGGCGAATCCCTCGCTGGCAAGACGCTGTTTCTGTGGGGCGAACAGGGCTTCGGTGACGCGATGCAGTTTGTCCGC
TTCGTTCCCGGGATTGCGGAGTTCGTCAGACAGCAAGGTGGACAGTTGTACTACTGCTGCTTCTCGAAGCTTCATACCTT
GTTCTCGCGCGGTCTTGCGGACGTGACCCCGGAGGTCATCCCGCATGACACTCCCAGTCTGCCCCGCTTCGGCTATCACC
TGCCGCTTTGTAGCGCGCCTCTAAGACTTGGCACCGAACTGGATACGTTGCCCGCCGATGTGCCATATCTGCGTGCGGAT
GCTGCCGCCGCAAGCGCGTGGGCGCAACGCCTGTCGGCGTCTGGCAAGCTCAACGTCGGCGTGGTCTGGAGCGGCAGCCG
TGGCCACCAGCGCAATCCGCTTCGCGCGGTGCCTGTCGCTGAGCTGGCCGGGGCGCTCAGCGACCTTCCCGGCATCGAGT
TCCACAGCATGCAGATCGATGGGGGGCGGAACTGGCAAGCGTCCCCGATTTCGATATCCGTGATCACACTGCGGAACTGC
GAAGCTACGACGACACCGCCGCACTGA

Upstream 100 bases:

>100_bases
ATGGCATCCCCGGCACAGGAAGTCCCCCGTCCCGGGCACGACCCCCTAGGGAAGATTCACACATGGCTTCGCGAAGGGGC
GCTGCTGCAGCGCCGCGCAT

Downstream 100 bases:

>100_bases
TTTCCAGTCTTGATCTCGTGATAACAGTGTGCACGTCCGTCGCACACCTTGCGGGCGCCCTCGGCAAACCGACCTGGGTG
ATGCTCGACGTGAACGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; Sulfotransferase; TPR Repeat; Exostosin Family Protein; FlbA Protein; Tetratricopeptide Tpr_2 Repeat Protein; Polypeptide N-Acetylglucosaminyltransferase; Tetratricopeptide Repeat Family Protein; TPR Repeat Containing Protein; Tetratricopeptide TPR_2 Domain-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Glycosyltransferase Family 9 Tpr Repeat Domain; TPR/Sulfotransferase Domain-Containing Protein; O-Linked N-Acetylglucosamine Transferase

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MIRDWRKRTPESVDAIVAQAALDVELGDTASARTALEQVLATVPNHPRALAGLAHLALCAGDAKSAVDWFQQTGPEALDE
AELSDWCEALTATGDLTHGADIARHLCERAPKAATSWFQLGLTLHHSGFHEQALDAYPKAHALDPDLDNLCNNIGAAYLQ
SGRTEEAMTPIRRAIELKPSNPLAWINLSDALLKLRRPDDAALAARRACALAPTMPLALQAQSNALKDLGQWADALALME
KAAMQAPVSGGIIWNLAMLQMLHGDYRNGLINFEHRWASPELAGTFPDLKAPIRRGESLAGKTLFLWGEQGFGDAMQFVR
FVPGIAEFVRQQGGQLYYCCFSKLHTLFSRGLADVTPEVIPHDTPSLPRFGYHLPLCSAPLRLGTELDTLPADVPYLRAD
AAAASAWAQRLSASGKLNVGVVWSGSRGHQRNPLRAVPVAELAGALSDLPGIEFHSMQIDGGRNWQASPISISVITLRNC
EATTTPPH

Sequences:

>Translated_488_residues
MIRDWRKRTPESVDAIVAQAALDVELGDTASARTALEQVLATVPNHPRALAGLAHLALCAGDAKSAVDWFQQTGPEALDE
AELSDWCEALTATGDLTHGADIARHLCERAPKAATSWFQLGLTLHHSGFHEQALDAYPKAHALDPDLDNLCNNIGAAYLQ
SGRTEEAMTPIRRAIELKPSNPLAWINLSDALLKLRRPDDAALAARRACALAPTMPLALQAQSNALKDLGQWADALALME
KAAMQAPVSGGIIWNLAMLQMLHGDYRNGLINFEHRWASPELAGTFPDLKAPIRRGESLAGKTLFLWGEQGFGDAMQFVR
FVPGIAEFVRQQGGQLYYCCFSKLHTLFSRGLADVTPEVIPHDTPSLPRFGYHLPLCSAPLRLGTELDTLPADVPYLRAD
AAAASAWAQRLSASGKLNVGVVWSGSRGHQRNPLRAVPVAELAGALSDLPGIEFHSMQIDGGRNWQASPISISVITLRNC
EATTTPPH
>Mature_488_residues
MIRDWRKRTPESVDAIVAQAALDVELGDTASARTALEQVLATVPNHPRALAGLAHLALCAGDAKSAVDWFQQTGPEALDE
AELSDWCEALTATGDLTHGADIARHLCERAPKAATSWFQLGLTLHHSGFHEQALDAYPKAHALDPDLDNLCNNIGAAYLQ
SGRTEEAMTPIRRAIELKPSNPLAWINLSDALLKLRRPDDAALAARRACALAPTMPLALQAQSNALKDLGQWADALALME
KAAMQAPVSGGIIWNLAMLQMLHGDYRNGLINFEHRWASPELAGTFPDLKAPIRRGESLAGKTLFLWGEQGFGDAMQFVR
FVPGIAEFVRQQGGQLYYCCFSKLHTLFSRGLADVTPEVIPHDTPSLPRFGYHLPLCSAPLRLGTELDTLPADVPYLRAD
AAAASAWAQRLSASGKLNVGVVWSGSRGHQRNPLRAVPVAELAGALSDLPGIEFHSMQIDGGRNWQASPISISVITLRNC
EATTTPPH

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=300, Percent_Identity=25, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI32307150, Length=300, Percent_Identity=25, Blast_Score=67, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52770; Mature: 52770

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDWRKRTPESVDAIVAQAALDVELGDTASARTALEQVLATVPNHPRALAGLAHLALCA
CCCCHHHCCCHHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GDAKSAVDWFQQTGPEALDEAELSDWCEALTATGDLTHGADIARHLCERAPKAATSWFQL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
GLTLHHSGFHEQALDAYPKAHALDPDLDNLCNNIGAAYLQSGRTEEAMTPIRRAIELKPS
CCCEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NPLAWINLSDALLKLRRPDDAALAARRACALAPTMPLALQAQSNALKDLGQWADALALME
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
KAAMQAPVSGGIIWNLAMLQMLHGDYRNGLINFEHRWASPELAGTFPDLKAPIRRGESLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCHHHHHHHCCCCCC
GKTLFLWGEQGFGDAMQFVRFVPGIAEFVRQQGGQLYYCCFSKLHTLFSRGLADVTPEVI
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHCCCCCC
PHDTPSLPRFGYHLPLCSAPLRLGTELDTLPADVPYLRADAAAASAWAQRLSASGKLNVG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VVWSGSRGHQRNPLRAVPVAELAGALSDLPGIEFHSMQIDGGRNWQASPISISVITLRNC
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEECC
EATTTPPH
CCCCCCCC
>Mature Secondary Structure
MIRDWRKRTPESVDAIVAQAALDVELGDTASARTALEQVLATVPNHPRALAGLAHLALCA
CCCCHHHCCCHHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GDAKSAVDWFQQTGPEALDEAELSDWCEALTATGDLTHGADIARHLCERAPKAATSWFQL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
GLTLHHSGFHEQALDAYPKAHALDPDLDNLCNNIGAAYLQSGRTEEAMTPIRRAIELKPS
CCCEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
NPLAWINLSDALLKLRRPDDAALAARRACALAPTMPLALQAQSNALKDLGQWADALALME
CCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
KAAMQAPVSGGIIWNLAMLQMLHGDYRNGLINFEHRWASPELAGTFPDLKAPIRRGESLA
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCHHHHHHHCCCCCC
GKTLFLWGEQGFGDAMQFVRFVPGIAEFVRQQGGQLYYCCFSKLHTLFSRGLADVTPEVI
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHCCCCCC
PHDTPSLPRFGYHLPLCSAPLRLGTELDTLPADVPYLRADAAAASAWAQRLSASGKLNVG
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VVWSGSRGHQRNPLRAVPVAELAGALSDLPGIEFHSMQIDGGRNWQASPISISVITLRNC
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEECC
EATTTPPH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA