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The map label for this gene is 94314627

Identifier: 94314627

GI number: 94314627

Start: 2465647

End: 2466336

Strand: Reverse

Name: 94314627

Synonym: Rmet_5708

Alternate gene names: NA

Gene position: 2466336-2465647 (Counterclockwise)

Preceding gene: 94314628

Following gene: 94314622

Centisome position: 95.59

GC content: 61.16

Gene sequence:

>690_bases
ATGGTGTACCGCGGCGGCGTCAGGCACGCCGCCGCGTGTCCCGAACCTAACAGAATCCGAATCCAAGAAATGAAAGCCAA
ATCTACCTGGATCGCTGTCGCGACCGTACTGGTCGCCGCTGCAGCACTGCAGGGGTGCTCGACCACGTCGAGTCGCCTCT
CGGATGACGGTCAGTCTGACCAAATCGTATTTCCGGACCCGGCTTCGTCGTGGCCGAAGGACGGTACGTTCCCGAATATC
GACAACCTGCGCATGCTGGCACCCGGCATGACGAAGTCTCAGCGCTATCCGCTGCTGGACCGGCCGCATTTCAATGAAGG
CTTCCTTGGCGTGCGCGAATGGGACTACCTGTTCAACTTCCGCACGGGCCGCGCCGCGCCGAACGATGTCGTCCAGTGCC
AGATGAAGGTCGTTTTCGACAAGAACGAGAAGACACGTGCGTACTACTGGAAGCCGGAATCCTGTGCTGGTTTCCTGAAC
AAGCCGGCTCCTGAAGTGCAACGAGTGGTTCTGCCGCCGGTTGTCGCCAACGTGCCAACGGTGCTGCGCAACGCAACGCT
GTTAGGCGATACGCTCTTCCGGTTCAACGGCTCGGGCCCAGGTGATCTGACCAACGACGGCCGCAGGCGGAGGGTCGCGG
CAAGTCTGAATCGGGTACGCAGTGCGGTACCCTGTCGCGCGCGAAGTTGA

Upstream 100 bases:

>100_bases
CGATCCAGACCTGTATCCGTCAACCGAGCCAACCGGCACTACCCGTGGCACCGTGGGCGTAGCGGCCGGCGCGGGCTTCC
ACTGGTAATTGATCGCGACG

Downstream 100 bases:

>100_bases
TCGAATGCCTGGCGCCGGACCGTCGCGTGGAGATTCGCATACTGGGTATGAAGTAAGAGGTGCGACTGCCGTCAGTCCTC
TTCTGGAGGAGGGGGACGGG

Product: putative Small protein A

Products: NA

Alternate protein names: Lipoprotein Mlp; OmpA/MotB Domain-Containing Protein; OmpA-Family Lipoprotein; Lipoprotein PlpD; OmpA/MotB Domain Protein; OmpA Family Protein; SmpA/OmlA Family Lipoprotein; SmpA Protein; OmpA/SmpA/OmlA Family Outer Membrane Lipoprotein; OmpA/MotBSmpA/OmlA; Antigen; Lipoprotein

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVYRGGVRHAAACPEPNRIRIQEMKAKSTWIAVATVLVAAAALQGCSTTSSRLSDDGQSDQIVFPDPASSWPKDGTFPNI
DNLRMLAPGMTKSQRYPLLDRPHFNEGFLGVREWDYLFNFRTGRAAPNDVVQCQMKVVFDKNEKTRAYYWKPESCAGFLN
KPAPEVQRVVLPPVVANVPTVLRNATLLGDTLFRFNGSGPGDLTNDGRRRRVAASLNRVRSAVPCRARS

Sequences:

>Translated_229_residues
MVYRGGVRHAAACPEPNRIRIQEMKAKSTWIAVATVLVAAAALQGCSTTSSRLSDDGQSDQIVFPDPASSWPKDGTFPNI
DNLRMLAPGMTKSQRYPLLDRPHFNEGFLGVREWDYLFNFRTGRAAPNDVVQCQMKVVFDKNEKTRAYYWKPESCAGFLN
KPAPEVQRVVLPPVVANVPTVLRNATLLGDTLFRFNGSGPGDLTNDGRRRRVAASLNRVRSAVPCRARS
>Mature_229_residues
MVYRGGVRHAAACPEPNRIRIQEMKAKSTWIAVATVLVAAAALQGCSTTSSRLSDDGQSDQIVFPDPASSWPKDGTFPNI
DNLRMLAPGMTKSQRYPLLDRPHFNEGFLGVREWDYLFNFRTGRAAPNDVVQCQMKVVFDKNEKTRAYYWKPESCAGFLN
KPAPEVQRVVLPPVVANVPTVLRNATLLGDTLFRFNGSGPGDLTNDGRRRRVAASLNRVRSAVPCRARS

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25393; Mature: 25393

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYRGGVRHAAACPEPNRIRIQEMKAKSTWIAVATVLVAAAALQGCSTTSSRLSDDGQSD
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
QIVFPDPASSWPKDGTFPNIDNLRMLAPGMTKSQRYPLLDRPHFNEGFLGVREWDYLFNF
EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEC
RTGRAAPNDVVQCQMKVVFDKNEKTRAYYWKPESCAGFLNKPAPEVQRVVLPPVVANVPT
CCCCCCCCHHHEEEEEEEECCCCCCEEEEECCHHHHHCCCCCCHHHHHHHCCHHHHHHHH
VLRNATLLGDTLFRFNGSGPGDLTNDGRRRRVAASLNRVRSAVPCRARS
HHHCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVYRGGVRHAAACPEPNRIRIQEMKAKSTWIAVATVLVAAAALQGCSTTSSRLSDDGQSD
CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
QIVFPDPASSWPKDGTFPNIDNLRMLAPGMTKSQRYPLLDRPHFNEGFLGVREWDYLFNF
EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEC
RTGRAAPNDVVQCQMKVVFDKNEKTRAYYWKPESCAGFLNKPAPEVQRVVLPPVVANVPT
CCCCCCCCHHHEEEEEEEECCCCCCEEEEECCHHHHHCCCCCCHHHHHHHCCHHHHHHHH
VLRNATLLGDTLFRFNGSGPGDLTNDGRRRRVAASLNRVRSAVPCRARS
HHHCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA