| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94314613
Identifier: 94314613
GI number: 94314613
Start: 2453140
End: 2453781
Strand: Reverse
Name: 94314613
Synonym: Rmet_5694
Alternate gene names: NA
Gene position: 2453781-2453140 (Counterclockwise)
Preceding gene: 94314616
Following gene: 94314610
Centisome position: 95.1
GC content: 63.86
Gene sequence:
>642_bases ATGAACTGCGACGATTCGAACTGCCTGCACCGTCTCGGGGGTATCGGGGCTGAGGCGCTGCGTGCCGGCAGTATTTGCAG TGCGGCCCCGGCTGTCAACTGGCGCCTGATGGCGGGGCAAGGTGTTGCTGTAGTTGCAGCAATTGCAACGGCGGATTTCA TCCGCCCCAGAAATGCCCCGCCATTAACATCTGCTCACGATCCCGTAACCCAATGTAATGGTTCCTCGTCCATGATGGAG TCGTACAAGCGAGGCCAATCATTGGCCGTCAAGGAGTCTGAAATGCGCAAGTCGATTCGTTATACCGGTATTGCCGTCCT GAGCGCCGCCATGCTGGTCGCGGGCTCGGCTTCGGCGCATGATCGTTACTATCGTGGCGGCTACCACGGTGGCGGTGGAA GTTCGGCAGGCGCGGCGCTGGCCGTGGCGGCCGTCGCGGGATTGGCGATTGGCGCGCTGGTGGCCAGCAGCCAGCCAGTG ATGGCTGCGCCGGCCCCGGTTTACGCGCCGCCGCAGCCCGTGGCCTACGCAGCGCCGCAAGTACCCCCGGGCTACTGCTA TCGCAGCTATGACGGCGCGTATGTGCCGTGCCGTGGCGCAGCCCCGGTCAACTACGCACCGCAGCCGTACTACGGTTACT GA
Upstream 100 bases:
>100_bases CGCAGGCGGCGAGCGCAGTCGCGGCTGCGGCGGCAATGATAAGGCGGCGTCTGATCATGGTCGTCCCTGATTGGGCCCTG TTGGGCAATGAGTAGGGGAA
Downstream 100 bases:
>100_bases TCCTGCATCGGGCTGGAGCCCTTGCGTGGGCTCCAGCCCCTCACTCCGCTAAACCTCACATCATTCGCGGGCAGGGCGAC GCACGACGCGCAGCTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNCDDSNCLHRLGGIGAEALRAGSICSAAPAVNWRLMAGQGVAVVAAIATADFIRPRNAPPLTSAHDPVTQCNGSSSMME SYKRGQSLAVKESEMRKSIRYTGIAVLSAAMLVAGSASAHDRYYRGGYHGGGGSSAGAALAVAAVAGLAIGALVASSQPV MAAPAPVYAPPQPVAYAAPQVPPGYCYRSYDGAYVPCRGAAPVNYAPQPYYGY
Sequences:
>Translated_213_residues MNCDDSNCLHRLGGIGAEALRAGSICSAAPAVNWRLMAGQGVAVVAAIATADFIRPRNAPPLTSAHDPVTQCNGSSSMME SYKRGQSLAVKESEMRKSIRYTGIAVLSAAMLVAGSASAHDRYYRGGYHGGGGSSAGAALAVAAVAGLAIGALVASSQPV MAAPAPVYAPPQPVAYAAPQVPPGYCYRSYDGAYVPCRGAAPVNYAPQPYYGY >Mature_213_residues MNCDDSNCLHRLGGIGAEALRAGSICSAAPAVNWRLMAGQGVAVVAAIATADFIRPRNAPPLTSAHDPVTQCNGSSSMME SYKRGQSLAVKESEMRKSIRYTGIAVLSAAMLVAGSASAHDRYYRGGYHGGGGSSAGAALAVAAVAGLAIGALVASSQPV MAAPAPVYAPPQPVAYAAPQVPPGYCYRSYDGAYVPCRGAAPVNYAPQPYYGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21759; Mature: 21759
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCDDSNCLHRLGGIGAEALRAGSICSAAPAVNWRLMAGQGVAVVAAIATADFIRPRNAP CCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCC PLTSAHDPVTQCNGSSSMMESYKRGQSLAVKESEMRKSIRYTGIAVLSAAMLVAGSASAH CCCCCCCCHHHCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DRYYRGGYHGGGGSSAGAALAVAAVAGLAIGALVASSQPVMAAPAPVYAPPQPVAYAAPQ CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEECCCC VPPGYCYRSYDGAYVPCRGAAPVNYAPQPYYGY CCCCCEEECCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNCDDSNCLHRLGGIGAEALRAGSICSAAPAVNWRLMAGQGVAVVAAIATADFIRPRNAP CCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCC PLTSAHDPVTQCNGSSSMMESYKRGQSLAVKESEMRKSIRYTGIAVLSAAMLVAGSASAH CCCCCCCCHHHCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DRYYRGGYHGGGGSSAGAALAVAAVAGLAIGALVASSQPVMAAPAPVYAPPQPVAYAAPQ CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEECCCC VPPGYCYRSYDGAYVPCRGAAPVNYAPQPYYGY CCCCCEEECCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA