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The map label for this gene is nimB

Identifier: 94314601

GI number: 94314601

Start: 2440396

End: 2441496

Strand: Reverse

Name: nimB

Synonym: Rmet_5682

Alternate gene names: NA

Gene position: 2441496-2440396 (Counterclockwise)

Preceding gene: 94314602

Following gene: 94314599

Centisome position: 94.63

GC content: 70.3

Gene sequence:

>1101_bases
ATGGTTTTTTCCCGGTTCCCCAGGATCGGCGCGGCTATCGCGTCGGCCGTATTTCTTGTCGGGCAATCGCTTGCCCAGTC
CACCAACCCGCCGGCAATGCAGCCGGTGCCACTGTCCGCCGACCAGGCGCGGGCGCTGGGCGTGCGGTTCAGTCCTGTCC
AGGCGTCGGCGAACCTGGAGGTTGGCACGCACGCGCGGGTCGTTTTCCGGCCCGACGCCCAGTACGTCGTGGCAGCGCCC
TATGCGGGGATCGTGCCCCGCGTGATCGTGGCGGTCGGCCAGACGGTGCGGCGTGGGGAGGCTCTGGCGACGTTCGCCAG
TCCGCAGCTTTTCGAAGCCAGCCGCGCGCTGACGGAGGCCAACTCGCAGGTCAACCTCGCCCAGAAATCGCTGGCCCGTG
ACAAGCTGCTGTTCGACGACGGCATCATCGCGAACAGCCGTCTGCAGGCTACCGAGGCCCGCGCGACCGAGGCGACGGCG
ATGGTCAAGGCACGGCGCGCCGAGCTGGCATCGGCGGGCATCGCCTTCACGGGCGCGGGCGGCGAGGCGCAGCTGGTAGC
CAATCGTTCCGGCGTGGTGTCCGAGGTCAATGCTGTTCCCGGCGCGCGCGTGGACGCCGCCGCGCCGCTGTTCCGGATCG
TCGATCCCAATGCGGTGGAACTGGACCTGCTGGTTGGCCGCGACATTCCCGTGCCGTCACTGGGCGATACCGTGGACATC
AAGCCGCGCGGCGCCACCGGCAAGGTGATCGGTATCGCGCCGACGGGCGATGGCACCGCCGGCGTGCGCGTGCGGGCGTC
GCTGGAGCGGCGCGGCAACCTTCGCGCGGGCGAGAACATCAACGTCACGCTGGTGCTGCGCGGCGCCACGGACGGGTCCG
GCGCGCCCGGCCGGGTGCGGATTCCGGCCGTTGCGCTGGTGTACTGGCAGGGGGTGCCCGGCGTATTCCTGGCCACTGAC
AAGGGCTTCACGTTCCACCGCGTCGAGATTGACAGCACCGACGACGCCACTGCCGTCGTCCGGACCAGGCTGCCTGCCGG
CGCTCGCGTGGCGGTCACCGGCATTGGGGCGCTCAAGGGCATCCTGACGGGAGACCAGTGA

Upstream 100 bases:

>100_bases
CACCTTCTCCTGATGTCACCGGCCGGCAGTCCGCCGGCATGTTCGCGCGCGCCCTGATTCGAGAGCGGGCCCGCGCGGGT
TTCGCATTCTGGAGTCATGT

Downstream 100 bases:

>100_bases
TGGTAGGCCGTCTGATCGATTTTTCCCTGCGGCAGCGCCCGCTGGTGCTGATCGCCGCCTGCGTGCTGGCGGCGGCCGGG
GCGTGGGCCTATCTGAACCT

Product: heavy metal cation tricomponent efflux membrane fusion protein NimB

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Cation Efflux Membrane Fusion Protein; Metal Transporter-Like Exported Protein; RND Divalent Metal Cation Efflux Membrane Fusion Protein; Cation Efflux System Protein CzcB; Cobalt-Zinc-Cadmium Resistance Protein CzcB; Membrane Fusion Protein; Heavy Metal Efflux System Protein; Cation Efflux Protein; Nickel-Cobalt-Cadmium Resistance Protein NccB; Efflux Transporter Rnd Family Mfp Subunit

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MVFSRFPRIGAAIASAVFLVGQSLAQSTNPPAMQPVPLSADQARALGVRFSPVQASANLEVGTHARVVFRPDAQYVVAAP
YAGIVPRVIVAVGQTVRRGEALATFASPQLFEASRALTEANSQVNLAQKSLARDKLLFDDGIIANSRLQATEARATEATA
MVKARRAELASAGIAFTGAGGEAQLVANRSGVVSEVNAVPGARVDAAAPLFRIVDPNAVELDLLVGRDIPVPSLGDTVDI
KPRGATGKVIGIAPTGDGTAGVRVRASLERRGNLRAGENINVTLVLRGATDGSGAPGRVRIPAVALVYWQGVPGVFLATD
KGFTFHRVEIDSTDDATAVVRTRLPAGARVAVTGIGALKGILTGDQ

Sequences:

>Translated_366_residues
MVFSRFPRIGAAIASAVFLVGQSLAQSTNPPAMQPVPLSADQARALGVRFSPVQASANLEVGTHARVVFRPDAQYVVAAP
YAGIVPRVIVAVGQTVRRGEALATFASPQLFEASRALTEANSQVNLAQKSLARDKLLFDDGIIANSRLQATEARATEATA
MVKARRAELASAGIAFTGAGGEAQLVANRSGVVSEVNAVPGARVDAAAPLFRIVDPNAVELDLLVGRDIPVPSLGDTVDI
KPRGATGKVIGIAPTGDGTAGVRVRASLERRGNLRAGENINVTLVLRGATDGSGAPGRVRIPAVALVYWQGVPGVFLATD
KGFTFHRVEIDSTDDATAVVRTRLPAGARVAVTGIGALKGILTGDQ
>Mature_366_residues
MVFSRFPRIGAAIASAVFLVGQSLAQSTNPPAMQPVPLSADQARALGVRFSPVQASANLEVGTHARVVFRPDAQYVVAAP
YAGIVPRVIVAVGQTVRRGEALATFASPQLFEASRALTEANSQVNLAQKSLARDKLLFDDGIIANSRLQATEARATEATA
MVKARRAELASAGIAFTGAGGEAQLVANRSGVVSEVNAVPGARVDAAAPLFRIVDPNAVELDLLVGRDIPVPSLGDTVDI
KPRGATGKVIGIAPTGDGTAGVRVRASLERRGNLRAGENINVTLVLRGATDGSGAPGRVRIPAVALVYWQGVPGVFLATD
KGFTFHRVEIDSTDDATAVVRTRLPAGARVAVTGIGALKGILTGDQ

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37845; Mature: 37845

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFSRFPRIGAAIASAVFLVGQSLAQSTNPPAMQPVPLSADQARALGVRFSPVQASANLE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECEEECCCCCCCCEE
VGTHARVVFRPDAQYVVAAPYAGIVPRVIVAVGQTVRRGEALATFASPQLFEASRALTEA
ECCEEEEEECCCCCEEEECCCHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHC
NSQVNLAQKSLARDKLLFDDGIIANSRLQATEARATEATAMVKARRAELASAGIAFTGAG
CCHHHHHHHHHHHCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GEAQLVANRSGVVSEVNAVPGARVDAAAPLFRIVDPNAVELDLLVGRDIPVPSLGDTVDI
CCEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEEE
KPRGATGKVIGIAPTGDGTAGVRVRASLERRGNLRAGENINVTLVLRGATDGSGAPGRVR
CCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEE
IPAVALVYWQGVPGVFLATDKGFTFHRVEIDSTDDATAVVRTRLPAGARVAVTGIGALKG
CCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEECHHHHE
ILTGDQ
EECCCC
>Mature Secondary Structure
MVFSRFPRIGAAIASAVFLVGQSLAQSTNPPAMQPVPLSADQARALGVRFSPVQASANLE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECEEECCCCCCCCEE
VGTHARVVFRPDAQYVVAAPYAGIVPRVIVAVGQTVRRGEALATFASPQLFEASRALTEA
ECCEEEEEECCCCCEEEECCCHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHC
NSQVNLAQKSLARDKLLFDDGIIANSRLQATEARATEATAMVKARRAELASAGIAFTGAG
CCHHHHHHHHHHHCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
GEAQLVANRSGVVSEVNAVPGARVDAAAPLFRIVDPNAVELDLLVGRDIPVPSLGDTVDI
CCEEEEECCCCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEEE
KPRGATGKVIGIAPTGDGTAGVRVRASLERRGNLRAGENINVTLVLRGATDGSGAPGRVR
CCCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCCCCCCEEEEEEEEECCCCCCCCCEEE
IPAVALVYWQGVPGVFLATDKGFTFHRVEIDSTDDATAVVRTRLPAGARVAVTGIGALKG
CCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEECHHHHE
ILTGDQ
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA