Click here to switch to the map view.

The map label for this gene is 94314594

Identifier: 94314594

GI number: 94314594

Start: 2433841

End: 2434278

Strand: Reverse

Name: 94314594

Synonym: Rmet_5675

Alternate gene names: NA

Gene position: 2434278-2433841 (Counterclockwise)

Preceding gene: 94314595

Following gene: 94314593

Centisome position: 94.35

GC content: 66.67

Gene sequence:

>438_bases
ATGCTGCTGATCGATCTTGGCAATTTCACCCCGGGCCTGTCCCTGGCCGGGGGCATCGTCATTGGCGTGGCCGCAGCCGT
GCTGGTGCTGTTCAATGGGCGGATCGCTGGCATCAGCGGCATCCTGGGCGGGCTGCTGAGCCTGCCGCGCCGCGACATGA
CGTGGCGGGTGGCCTTCCTGATAGGGCTGATCGGCGCACCGATACTTGCCGCGCTGTTCGGGATGCCGGCCAAGGCCGAT
ATCCAGGCAAGCTGGGGCGAGGTGCTCGTCGCGGGCTTTCTGGTCGGGATCGGCACGCGCTACGCGGGCGGATGCACCAG
CGGCCACGGCGTCTGCGGTATCTCGCGTGGGTCCATCCGTTCGCTGGTGGCCACGCTGACCTTCATGGCGGCAGGCTTTC
TGACCGTTTTCGTCACCCATCACCTGATCGGAGCCTGA

Upstream 100 bases:

>100_bases
CGAGGGCAAGAACATCATCTATGCCGTGGCCAGCGAACAGGCACTTGCTGTCATGGCCGTGCTGTACGAACAGTTCTGCG
CGAATTCCTGAGGAGCGAAC

Downstream 100 bases:

>100_bases
TATGAGCGCCATCACCGCACTGCTCGCGGGCCTGCTGTTCGGCATCGGCCTGATGGTTTCCGGCATGGCCAATCCGGCCA
AGGTGCTGGGCTTTCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLLIDLGNFTPGLSLAGGIVIGVAAAVLVLFNGRIAGISGILGGLLSLPRRDMTWRVAFLIGLIGAPILAALFGMPAKAD
IQASWGEVLVAGFLVGIGTRYAGGCTSGHGVCGISRGSIRSLVATLTFMAAGFLTVFVTHHLIGA

Sequences:

>Translated_145_residues
MLLIDLGNFTPGLSLAGGIVIGVAAAVLVLFNGRIAGISGILGGLLSLPRRDMTWRVAFLIGLIGAPILAALFGMPAKAD
IQASWGEVLVAGFLVGIGTRYAGGCTSGHGVCGISRGSIRSLVATLTFMAAGFLTVFVTHHLIGA
>Mature_145_residues
MLLIDLGNFTPGLSLAGGIVIGVAAAVLVLFNGRIAGISGILGGLLSLPRRDMTWRVAFLIGLIGAPILAALFGMPAKAD
IQASWGEVLVAGFLVGIGTRYAGGCTSGHGVCGISRGSIRSLVATLTFMAAGFLTVFVTHHLIGA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 14676; Mature: 14676

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIDLGNFTPGLSLAGGIVIGVAAAVLVLFNGRIAGISGILGGLLSLPRRDMTWRVAFL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
IGLIGAPILAALFGMPAKADIQASWGEVLVAGFLVGIGTRYAGGCTSGHGVCGISRGSIR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHH
SLVATLTFMAAGFLTVFVTHHLIGA
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLIDLGNFTPGLSLAGGIVIGVAAAVLVLFNGRIAGISGILGGLLSLPRRDMTWRVAFL
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
IGLIGAPILAALFGMPAKADIQASWGEVLVAGFLVGIGTRYAGGCTSGHGVCGISRGSIR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHH
SLVATLTFMAAGFLTVFVTHHLIGA
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]